RNA–Protein interactions for RNA: ENST00000438886.1

APEX1-203, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-203ENST00000438886 ALS2Q96Q42 1657 aa11.71□□□□□ -0.54
APEX1-203ENST00000438886 SSH2Q76I76 1423 aa11.7□□□□□ -0.54
APEX1-203ENST00000438886 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
APEX1-203ENST00000438886 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
APEX1-203ENST00000438886 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
APEX1-203ENST00000438886 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
APEX1-203ENST00000438886 MED1Q15648 1581 aaPredicted RBP11.7□□□□□ -0.54
APEX1-203ENST00000438886 COL22A1Q8NFW1 1626 aaPredicted RBP11.69□□□□□ -0.54
APEX1-203ENST00000438886 JCADQ9P266 1359 aa11.68□□□□□ -0.54
APEX1-203ENST00000438886 SPATA31A3Q5VYP0 1347 aa11.68□□□□□ -0.54
APEX1-203ENST00000438886 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
APEX1-203ENST00000438886 NSD2O96028 1365 aa11.67□□□□□ -0.54
APEX1-203ENST00000438886 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
APEX1-203ENST00000438886 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
APEX1-203ENST00000438886 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
APEX1-203ENST00000438886 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
APEX1-203ENST00000438886 PANK3Q9H999 370 aa11.66□□□□□ -0.54
APEX1-203ENST00000438886 NSD3Q9BZ95 1437 aa11.66□□□□□ -0.54
APEX1-203ENST00000438886 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
APEX1-203ENST00000438886 HSPA1LP34931 641 aa11.65□□□□□ -0.54
APEX1-203ENST00000438886 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
APEX1-203ENST00000438886 USP31Q70CQ4 1352 aa11.65□□□□□ -0.55
APEX1-203ENST00000438886 PNPLA6Q8IY17 1366 aa11.65□□□□□ -0.55
APEX1-203ENST00000438886 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
APEX1-203ENST00000438886 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
APEX1-203ENST00000438886 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
APEX1-203ENST00000438886 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
APEX1-203ENST00000438886 NLRP13Q86W25 1043 aa11.64□□□□□ -0.55
APEX1-203ENST00000438886 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
APEX1-203ENST00000438886 DDX17Q92841 729 aaKnown RBP11.64□□□□□ -0.55
APEX1-203ENST00000438886 ABCA3Q99758 1704 aa11.63□□□□□ -0.55
APEX1-203ENST00000438886 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
APEX1-203ENST00000438886 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
APEX1-203ENST00000438886 SLIT3O75094 1523 aa11.63□□□□□ -0.55
APEX1-203ENST00000438886 PHRF1Q9P1Y6 1649 aaKnown RBP11.63□□□□□ -0.55
APEX1-203ENST00000438886 USP19O94966 1318 aa11.62□□□□□ -0.55
APEX1-203ENST00000438886 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
APEX1-203ENST00000438886 MARF1Q9Y4F3 1742 aaKnown RBP11.61□□□□□ -0.55
APEX1-203ENST00000438886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.61□□□□□ -0.55
APEX1-203ENST00000438886 KCNH5Q8NCM2 988 aa11.61□□□□□ -0.55
APEX1-203ENST00000438886 COG3Q96JB2 828 aa11.61□□□□□ -0.55
APEX1-203ENST00000438886 ABCC6O95255 1503 aa11.6□□□□□ -0.55
APEX1-203ENST00000438886 FYB1O15117 783 aa11.6□□□□□ -0.55
APEX1-203ENST00000438886 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
APEX1-203ENST00000438886 NLRP6P59044 892 aa11.6□□□□□ -0.55
APEX1-203ENST00000438886 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
APEX1-203ENST00000438886 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
APEX1-203ENST00000438886 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
APEX1-203ENST00000438886 NME9Q86XW9 330 aa11.58□□□□□ -0.56
APEX1-203ENST00000438886 CPDO75976 1380 aa11.57□□□□□ -0.56
APEX1-203ENST00000438886 KIF24Q5T7B8 1368 aa11.57□□□□□ -0.56
APEX1-203ENST00000438886 NFAT5O94916 1531 aa11.57□□□□□ -0.56
APEX1-203ENST00000438886 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
APEX1-203ENST00000438886 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
APEX1-203ENST00000438886 GCP02774 474 aa11.56□□□□□ -0.56
APEX1-203ENST00000438886 COL14A1Q05707 1796 aaKnown RBP11.56□□□□□ -0.56
APEX1-203ENST00000438886 RTL1A6NKG5 1358 aa11.55□□□□□ -0.56
APEX1-203ENST00000438886 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
APEX1-203ENST00000438886 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
APEX1-203ENST00000438886 NWD2Q9ULI1 1742 aa11.55□□□□□ -0.56
APEX1-203ENST00000438886 LTN1O94822 1766 aa11.54□□□□□ -0.56
APEX1-203ENST00000438886 NUTM2GQ5VZR2 741 aa11.54□□□□□ -0.56
APEX1-203ENST00000438886 MORC1Q86VD1 984 aa11.54□□□□□ -0.56
APEX1-203ENST00000438886 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
APEX1-203ENST00000438886 LRP6O75581 1613 aa11.53□□□□□ -0.56
APEX1-203ENST00000438886 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.56
APEX1-203ENST00000438886 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.52□□□□□ -0.56
APEX1-203ENST00000438886 RALBP1Q15311 655 aa11.52□□□□□ -0.57
APEX1-203ENST00000438886 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.57
APEX1-203ENST00000438886 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
APEX1-203ENST00000438886 LMO7Q8WWI1 1683 aa11.52□□□□□ -0.57
APEX1-203ENST00000438886 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.57
APEX1-203ENST00000438886 PARD3Q8TEW0 1356 aa11.52□□□□□ -0.57
APEX1-203ENST00000438886 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
APEX1-203ENST00000438886 CC2D1BQ5T0F9 858 aaKnown RBP11.51□□□□□ -0.57
APEX1-203ENST00000438886 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
APEX1-203ENST00000438886 PRDM11Q9NQV5 511 aa11.51□□□□□ -0.57
APEX1-203ENST00000438886 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
APEX1-203ENST00000438886 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
APEX1-203ENST00000438886 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
APEX1-203ENST00000438886 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
APEX1-203ENST00000438886 COL18A1P39060 1754 aa11.5□□□□□ -0.57
APEX1-203ENST00000438886 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
APEX1-203ENST00000438886 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
APEX1-203ENST00000438886 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
APEX1-203ENST00000438886 FLT4P35916 1363 aa11.5□□□□□ -0.57
APEX1-203ENST00000438886 SLIT2O94813 1529 aa11.5□□□□□ -0.57
APEX1-203ENST00000438886 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
APEX1-203ENST00000438886 ADAMTS2O95450 1211 aa11.48□□□□□ -0.57
APEX1-203ENST00000438886 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
APEX1-203ENST00000438886 IP6K1Q92551 441 aa11.48□□□□□ -0.57
APEX1-203ENST00000438886 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
APEX1-203ENST00000438886 NRAPQ86VF7 1730 aa11.48□□□□□ -0.57
APEX1-203ENST00000438886 INSRP06213 1382 aa11.47□□□□□ -0.57
APEX1-203ENST00000438886 MYBBP1AQ9BQG0 1328 aaKnown RBP11.47□□□□□ -0.57
APEX1-203ENST00000438886 ANP32CO43423 234 aa11.47□□□□□ -0.57
APEX1-203ENST00000438886 AMPHP49418 695 aa11.47□□□□□ -0.57
APEX1-203ENST00000438886 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
APEX1-203ENST00000438886 PRKRIP1Q9H875 184 aaPredicted RBP11.47□□□□□ -0.57
APEX1-203ENST00000438886 POLKQ9UBT6 870 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms