RNA–Protein interactions for RNA: ENST00000438885.2

LINC01649-201, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5

Gene LINC01649, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-201ENST00000438885 CECR2Q9BXF3 1484 aa7.67□□□□□ -1.18
LINC01649-201ENST00000438885 CCDC102AQ96A19 550 aa7.66□□□□□ -1.18
LINC01649-201ENST00000438885 IGHA1P01876 353 aa7.65□□□□□ -1.18
LINC01649-201ENST00000438885 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
LINC01649-201ENST00000438885 JUNDP17535 347 aa7.64□□□□□ -1.19
LINC01649-201ENST00000438885 MDM2Q00987 491 aaPredicted RBP7.64□□□□□ -1.19
LINC01649-201ENST00000438885 MAP2K5Q13163 448 aa7.64□□□□□ -1.19
LINC01649-201ENST00000438885 SCARF1Q14162 830 aa7.64□□□□□ -1.19
LINC01649-201ENST00000438885 XP32Q5T750 250 aa7.64□□□□□ -1.19
LINC01649-201ENST00000438885 GPAT2Q6NUI2 795 aa7.64□□□□□ -1.19
LINC01649-201ENST00000438885 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
LINC01649-201ENST00000438885 SIAH2O43255 324 aa7.63□□□□□ -1.19
LINC01649-201ENST00000438885 HOXA2O43364 376 aa7.63□□□□□ -1.19
LINC01649-201ENST00000438885 ZMYND10O75800 440 aa7.63□□□□□ -1.19
LINC01649-201ENST00000438885 BARGINQ6ZT62 677 aa7.62□□□□□ -1.19
LINC01649-201ENST00000438885 ANP32EQ9BTT0 268 aa7.62□□□□□ -1.19
LINC01649-201ENST00000438885 MINK1Q8N4C8 1332 aaPredicted RBP7.62□□□□□ -1.19
LINC01649-201ENST00000438885 BCANQ96GW7 911 aa7.62□□□□□ -1.19
LINC01649-201ENST00000438885 ADAMTS8Q9UP79 889 aa7.62□□□□□ -1.19
LINC01649-201ENST00000438885 MRPL14Q6P1L8 145 aaKnown RBP7.61□□□□□ -1.19
LINC01649-201ENST00000438885 DNMT3AQ9Y6K1 912 aaPredicted RBP7.61□□□□□ -1.19
LINC01649-201ENST00000438885 RETREG3Q86VR2 466 aa7.6□□□□□ -1.19
LINC01649-201ENST00000438885 PURBQ96QR8 312 aaKnown RBP7.6□□□□□ -1.19
LINC01649-201ENST00000438885 NUDT12Q9BQG2 462 aa7.6□□□□□ -1.19
LINC01649-201ENST00000438885 SOBPA7XYQ1 873 aa7.59□□□□□ -1.19
LINC01649-201ENST00000438885 SLC24A3Q9HC58 644 aa7.59□□□□□ -1.19
LINC01649-201ENST00000438885 FOXK2Q01167 660 aa7.58□□□□□ -1.2
LINC01649-201ENST00000438885 WRNQ14191 1432 aaPredicted RBP eCLIP7.58□□□□□ -1.2
LINC01649-201ENST00000438885 HLA-CQ95604 372 aa7.57□□□□□ -1.2
LINC01649-201ENST00000438885 SMARCA4P51532 1647 aa7.57□□□□□ -1.2
LINC01649-201ENST00000438885 MAN1A2O60476 641 aa7.56□□□□□ -1.2
LINC01649-201ENST00000438885 CCER1Q8TC90 406 aaPredicted RBP7.56□□□□□ -1.2
LINC01649-201ENST00000438885 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
LINC01649-201ENST00000438885 CCNYL3P0C7X3 344 aa7.55□□□□□ -1.2
LINC01649-201ENST00000438885 MPNDQ8N594 471 aa7.55□□□□□ -1.2
LINC01649-201ENST00000438885 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
LINC01649-201ENST00000438885 TRIM66O15016 1216 aa7.54□□□□□ -1.2
LINC01649-201ENST00000438885 MS4A1P11836 297 aa7.54□□□□□ -1.2
LINC01649-201ENST00000438885 CLCN1P35523 988 aa7.54□□□□□ -1.2
LINC01649-201ENST00000438885 IRS1P35568 1242 aa7.54□□□□□ -1.2
LINC01649-201ENST00000438885 GPCPD1Q9NPB8 672 aa7.54□□□□□ -1.2
LINC01649-201ENST00000438885 NCAPD3P42695 1498 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 ATAD2BQ9ULI0 1458 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 SH3BP2P78314 561 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 NNTQ13423 1086 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 TTLL12Q14166 644 aaPredicted RBP7.53□□□□□ -1.2
LINC01649-201ENST00000438885 PTPRNQ16849 979 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
LINC01649-201ENST00000438885 KANK3Q6NY19 840 aa7.53□□□□□ -1.2
LINC01649-201ENST00000438885 FAM9AQ8IZU1 332 aaPredicted RBP7.53□□□□□ -1.2
LINC01649-201ENST00000438885 MROH2BQ7Z745 1585 aa7.52□□□□□ -1.21
LINC01649-201ENST00000438885 NUTM1Q86Y26 1132 aa7.52□□□□□ -1.21
LINC01649-201ENST00000438885 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
LINC01649-201ENST00000438885 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.21
LINC01649-201ENST00000438885 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
LINC01649-201ENST00000438885 FAM217BQ9NTX9 383 aaPredicted RBP7.52□□□□□ -1.21
LINC01649-201ENST00000438885 BAZ1AQ9NRL2 1556 aaPredicted RBP7.52□□□□□ -1.21
LINC01649-201ENST00000438885 ADH1CP00326 375 aa7.51□□□□□ -1.21
LINC01649-201ENST00000438885 VARSP26640 1264 aaKnown RBP7.51□□□□□ -1.21
LINC01649-201ENST00000438885 SSTR3P32745 418 aaPredicted RBP7.51□□□□□ -1.21
LINC01649-201ENST00000438885 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
LINC01649-201ENST00000438885 SVOPQ8N4V2 548 aa7.51□□□□□ -1.21
LINC01649-201ENST00000438885 SYMPKQ92797 1274 aaKnown RBP7.51□□□□□ -1.21
LINC01649-201ENST00000438885 TLL2Q9Y6L7 1015 aa7.51□□□□□ -1.21
LINC01649-201ENST00000438885 TIMP2P16035 220 aa7.5□□□□□ -1.21
LINC01649-201ENST00000438885 ERICH6Q7L0X2 663 aa7.5□□□□□ -1.21
LINC01649-201ENST00000438885 AK7Q96M32 723 aa7.5□□□□□ -1.21
LINC01649-201ENST00000438885 UNC93B1Q9H1C4 597 aa7.5□□□□□ -1.21
LINC01649-201ENST00000438885 FDX1P10109 184 aa7.49□□□□□ -1.21
LINC01649-201ENST00000438885 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
LINC01649-201ENST00000438885 KRT76Q01546 638 aa7.49□□□□□ -1.21
LINC01649-201ENST00000438885 C6orf229H3BNL8 230 aa7.49□□□□□ -1.21
LINC01649-201ENST00000438885 MARSP56192 900 aaKnown RBP7.49□□□□□ -1.21
LINC01649-201ENST00000438885 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
LINC01649-201ENST00000438885 GIGYF2Q6Y7W6 1299 aaKnown RBP7.49□□□□□ -1.21
LINC01649-201ENST00000438885 EVA1BQ9NVM1 165 aa7.49□□□□□ -1.21
LINC01649-201ENST00000438885 PEG3Q9GZU2 1588 aa7.48□□□□□ -1.21
LINC01649-201ENST00000438885 ADAM23O75077 832 aa7.48□□□□□ -1.21
LINC01649-201ENST00000438885 C6orf118Q5T5N4 469 aa7.48□□□□□ -1.21
LINC01649-201ENST00000438885 DESI1Q6ICB0 168 aa7.48□□□□□ -1.21
LINC01649-201ENST00000438885 PARP9Q8IXQ6 854 aa7.48□□□□□ -1.21
LINC01649-201ENST00000438885 ZNF511Q8NB15 262 aa7.48□□□□□ -1.21
LINC01649-201ENST00000438885 PDE4DQ08499 809 aa7.47□□□□□ -1.21
LINC01649-201ENST00000438885 KCNH2Q12809 1159 aa7.47□□□□□ -1.21
LINC01649-201ENST00000438885 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
LINC01649-201ENST00000438885 HMGXB3Q12766 1538 aa7.47□□□□□ -1.21
LINC01649-201ENST00000438885 RSF1Q96T23 1441 aaPredicted RBP7.46□□□□□ -1.21
LINC01649-201ENST00000438885 WIZO95785 1651 aa7.46□□□□□ -1.21
LINC01649-201ENST00000438885 SPDYE5A6NIY4 337 aa7.46□□□□□ -1.22
LINC01649-201ENST00000438885 AMHR2Q16671 573 aa7.46□□□□□ -1.22
LINC01649-201ENST00000438885 GPR161Q8N6U8 529 aaKnown RBP7.46□□□□□ -1.22
LINC01649-201ENST00000438885 PCDHGC3Q9UN70 934 aa7.46□□□□□ -1.22
LINC01649-201ENST00000438885 SUPT16HQ9Y5B9 1047 aaKnown RBP7.46□□□□□ -1.22
LINC01649-201ENST00000438885 UPP2O95045 317 aa7.45□□□□□ -1.22
LINC01649-201ENST00000438885 NDUFV2P19404 249 aa7.45□□□□□ -1.22
LINC01649-201ENST00000438885 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
LINC01649-201ENST00000438885 COL25A1Q9BXS0 654 aaPredicted RBP7.45□□□□□ -1.22
LINC01649-201ENST00000438885 TPRNQ4KMQ1 711 aa7.44□□□□□ -1.22
LINC01649-201ENST00000438885 FAM174AQ8TBP5 190 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms