RNA–Protein interactions for RNA: ENST00000438274.7

BECN1-202, Transcript of beclin 1, humanhuman

TSL 2 BASIC

Gene BECN1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-202ENST00000438274 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
BECN1-202ENST00000438274 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
BECN1-202ENST00000438274 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
BECN1-202ENST00000438274 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
BECN1-202ENST00000438274 ACEP12821 1306 aa13.22□□□□□ -0.29
BECN1-202ENST00000438274 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
BECN1-202ENST00000438274 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
BECN1-202ENST00000438274 MYOM1P52179 1685 aa13.21□□□□□ -0.3
BECN1-202ENST00000438274 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
BECN1-202ENST00000438274 NPHP3Q7Z494 1330 aa13.2□□□□□ -0.3
BECN1-202ENST00000438274 PSME1Q06323 249 aa13.2□□□□□ -0.3
BECN1-202ENST00000438274 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
BECN1-202ENST00000438274 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
BECN1-202ENST00000438274 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
BECN1-202ENST00000438274 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
BECN1-202ENST00000438274 AHDC1Q5TGY3 1603 aaPredicted RBP13.18□□□□□ -0.3
BECN1-202ENST00000438274 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
BECN1-202ENST00000438274 CD163L1Q9NR16 1453 aa13.18□□□□□ -0.3
BECN1-202ENST00000438274 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 JCADQ9P266 1359 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
BECN1-202ENST00000438274 TERF2IPQ9NYB0 399 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 PXDNQ92626 1479 aa13.17□□□□□ -0.3
BECN1-202ENST00000438274 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
BECN1-202ENST00000438274 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
BECN1-202ENST00000438274 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
BECN1-202ENST00000438274 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
BECN1-202ENST00000438274 SOS2Q07890 1332 aaPredicted RBP13.16□□□□□ -0.3
BECN1-202ENST00000438274 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
BECN1-202ENST00000438274 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
BECN1-202ENST00000438274 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
BECN1-202ENST00000438274 USP6P35125 1406 aa13.15□□□□□ -0.3
BECN1-202ENST00000438274 COL16A1Q07092 1604 aaPredicted RBP13.15□□□□□ -0.3
BECN1-202ENST00000438274 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
BECN1-202ENST00000438274 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
BECN1-202ENST00000438274 PANK3Q9H999 370 aa13.15□□□□□ -0.3
BECN1-202ENST00000438274 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.31
BECN1-202ENST00000438274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
BECN1-202ENST00000438274 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
BECN1-202ENST00000438274 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
BECN1-202ENST00000438274 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
BECN1-202ENST00000438274 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
BECN1-202ENST00000438274 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
BECN1-202ENST00000438274 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
BECN1-202ENST00000438274 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
BECN1-202ENST00000438274 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
BECN1-202ENST00000438274 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
BECN1-202ENST00000438274 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
BECN1-202ENST00000438274 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
BECN1-202ENST00000438274 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
BECN1-202ENST00000438274 ALS2Q96Q42 1657 aa13.09□□□□□ -0.31
BECN1-202ENST00000438274 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
BECN1-202ENST00000438274 NME9Q86XW9 330 aa13.09□□□□□ -0.31
BECN1-202ENST00000438274 TTC21AQ8NDW8 1320 aa13.09□□□□□ -0.31
BECN1-202ENST00000438274 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
BECN1-202ENST00000438274 ARHGEF10O15013 1369 aa13.08□□□□□ -0.32
BECN1-202ENST00000438274 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.32
BECN1-202ENST00000438274 NLRP6P59044 892 aa13.07□□□□□ -0.32
BECN1-202ENST00000438274 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
BECN1-202ENST00000438274 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
BECN1-202ENST00000438274 CNGB1Q14028 1251 aaPredicted RBP13.07□□□□□ -0.32
BECN1-202ENST00000438274 CABLES1Q8TDN4 633 aa13.07□□□□□ -0.32
BECN1-202ENST00000438274 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
BECN1-202ENST00000438274 FYB1O15117 783 aa13.06□□□□□ -0.32
BECN1-202ENST00000438274 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
BECN1-202ENST00000438274 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
BECN1-202ENST00000438274 KIF20BQ96Q89 1820 aa13.05□□□□□ -0.32
BECN1-202ENST00000438274 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
BECN1-202ENST00000438274 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
BECN1-202ENST00000438274 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
BECN1-202ENST00000438274 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
BECN1-202ENST00000438274 SOX12O15370 315 aa13.04□□□□□ -0.32
BECN1-202ENST00000438274 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
BECN1-202ENST00000438274 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
BECN1-202ENST00000438274 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
BECN1-202ENST00000438274 COL22A1Q8NFW1 1626 aaPredicted RBP13.04□□□□□ -0.32
BECN1-202ENST00000438274 COG3Q96JB2 828 aa13.03□□□□□ -0.32
BECN1-202ENST00000438274 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
BECN1-202ENST00000438274 USP31Q70CQ4 1352 aa13.02□□□□□ -0.32
BECN1-202ENST00000438274 LRP6O75581 1613 aa13.02□□□□□ -0.33
BECN1-202ENST00000438274 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
BECN1-202ENST00000438274 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
BECN1-202ENST00000438274 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.33
BECN1-202ENST00000438274 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.33
BECN1-202ENST00000438274 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
BECN1-202ENST00000438274 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
BECN1-202ENST00000438274 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
BECN1-202ENST00000438274 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
BECN1-202ENST00000438274 ILDR2Q71H61 639 aa13.01□□□□□ -0.33
BECN1-202ENST00000438274 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms