RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 CCNB3Q8WWL7 1395 aa8.21□□□□□ -1.1
CCDC93-203ENST00000437999 ZNF518AQ6AHZ1 1483 aa8.2□□□□□ -1.1
CCDC93-203ENST00000437999 ABCC1P33527 1531 aa8.2□□□□□ -1.1
CCDC93-203ENST00000437999 ARHGEF12Q9NZN5 1544 aa8.2□□□□□ -1.1
CCDC93-203ENST00000437999 CFDP1Q9UEE9 299 aaPredicted RBP8.2□□□□□ -1.1
CCDC93-203ENST00000437999 ITSN2Q9NZM3 1697 aa8.2□□□□□ -1.1
CCDC93-203ENST00000437999 TRAPPC8Q9Y2L5 1435 aa8.2□□□□□ -1.1
CCDC93-203ENST00000437999 TIAM1Q13009 1591 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 SAMD9LQ8IVG5 1584 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 ADAMTSL3P82987 1691 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 OATP04181 439 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 PPP4CP60510 307 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 TATDN2Q93075 761 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 PNMA3Q9UL41 463 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 BCORL1Q5H9F3 1711 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 SIGLEC1Q9BZZ2 1709 aa8.19□□□□□ -1.1
CCDC93-203ENST00000437999 KDM5CP41229 1560 aa8.18□□□□□ -1.1
CCDC93-203ENST00000437999 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.1
CCDC93-203ENST00000437999 NUDT18Q6ZVK8 323 aa8.18□□□□□ -1.1
CCDC93-203ENST00000437999 RBM46Q8TBY0 533 aaKnown RBP8.18□□□□□ -1.1
CCDC93-203ENST00000437999 EYA1Q99502 592 aa8.18□□□□□ -1.1
CCDC93-203ENST00000437999 ATP10AO60312 1499 aa8.18□□□□□ -1.1
CCDC93-203ENST00000437999 SUPT6HQ7KZ85 1726 aaKnown RBP8.17□□□□□ -1.1
CCDC93-203ENST00000437999 FAM161AQ3B820 660 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
CCDC93-203ENST00000437999 PXYLP1Q8TE99 480 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 CCDC102AQ96A19 550 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 AK7Q96M32 723 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 SLC24A3Q9HC58 644 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 NCOA2Q15596 1464 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 LRRC9Q6ZRR7 1453 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 MLH3Q9UHC1 1453 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 SYCP2Q9BX26 1530 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 HECW2Q9P2P5 1572 aa8.17□□□□□ -1.1
CCDC93-203ENST00000437999 SMAPO00193 183 aa8.16□□□□□ -1.1
CCDC93-203ENST00000437999 HDGFP51858 240 aaKnown RBP8.16□□□□□ -1.1
CCDC93-203ENST00000437999 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
CCDC93-203ENST00000437999 MAP3K1Q13233 1512 aa8.16□□□□□ -1.1
CCDC93-203ENST00000437999 MLECQ14165 292 aa8.16□□□□□ -1.1
CCDC93-203ENST00000437999 C9orf84Q5VXU9 1444 aa8.16□□□□□ -1.1
CCDC93-203ENST00000437999 METTL3Q86U44 580 aaKnown RBP8.16□□□□□ -1.1
CCDC93-203ENST00000437999 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
CCDC93-203ENST00000437999 ZNF644Q9H582 1327 aaPredicted RBP8.16□□□□□ -1.1
CCDC93-203ENST00000437999 KIAA1107Q9UPP5 1409 aa8.16□□□□□ -1.1
CCDC93-203ENST00000437999 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.1
CCDC93-203ENST00000437999 DIP2CQ9Y2E4 1556 aa8.15□□□□□ -1.1
CCDC93-203ENST00000437999 PTPRMP28827 1452 aa8.15□□□□□ -1.1
CCDC93-203ENST00000437999 PLEKHH2Q8IVE3 1493 aa8.15□□□□□ -1.1
CCDC93-203ENST00000437999 SAMD7Q7Z3H4 446 aa8.15□□□□□ -1.1
CCDC93-203ENST00000437999 ABCA6Q8N139 1617 aa8.14□□□□□ -1.11
CCDC93-203ENST00000437999 SPAG9O60271 1321 aaKnown RBP8.14□□□□□ -1.11
CCDC93-203ENST00000437999 RIMS1Q86UR5 1692 aaKnown RBP8.14□□□□□ -1.11
CCDC93-203ENST00000437999 HRCP23327 699 aa8.13□□□□□ -1.11
CCDC93-203ENST00000437999 PHOX2BQ99453 314 aa8.13□□□□□ -1.11
CCDC93-203ENST00000437999 REREQ9P2R6 1566 aa8.13□□□□□ -1.11
CCDC93-203ENST00000437999 MBD5Q9P267 1494 aa8.13□□□□□ -1.11
CCDC93-203ENST00000437999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.12□□□□□ -1.11
CCDC93-203ENST00000437999 RCCD1A6NED2 376 aa8.12□□□□□ -1.11
CCDC93-203ENST00000437999 TRIM66O15016 1216 aa8.12□□□□□ -1.11
CCDC93-203ENST00000437999 DNAJB2P25686 324 aa8.12□□□□□ -1.11
CCDC93-203ENST00000437999 FER1L4A9Z1Z3 1794 aa8.12□□□□□ -1.11
CCDC93-203ENST00000437999 CAMSAP2Q08AD1 1489 aa8.12□□□□□ -1.11
CCDC93-203ENST00000437999 ATP7AQ04656 1500 aa8.11□□□□□ -1.11
CCDC93-203ENST00000437999 INO80Q9ULG1 1556 aaPredicted RBP8.1□□□□□ -1.11
CCDC93-203ENST00000437999 AGLP35573 1532 aa8.1□□□□□ -1.11
CCDC93-203ENST00000437999 AMHR2Q16671 573 aa8.1□□□□□ -1.11
CCDC93-203ENST00000437999 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
CCDC93-203ENST00000437999 TMEM134Q9H6X4 195 aa8.1□□□□□ -1.11
CCDC93-203ENST00000437999 CCDC141Q6ZP82 1450 aa8.09□□□□□ -1.11
CCDC93-203ENST00000437999 TJAP1Q5JTD0 557 aa8.09□□□□□ -1.11
CCDC93-203ENST00000437999 MYOM3Q5VTT5 1437 aa8.09□□□□□ -1.11
CCDC93-203ENST00000437999 A2MP01023 1474 aa8.08□□□□□ -1.12
CCDC93-203ENST00000437999 CEBPAP49715 358 aaPredicted RBP8.08□□□□□ -1.12
CCDC93-203ENST00000437999 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
CCDC93-203ENST00000437999 IL21Q9HBE4 155 aa8.08□□□□□ -1.12
CCDC93-203ENST00000437999 RTEL1-TNFRSF6BF6WH68 1400 aa8.08□□□□□ -1.12
CCDC93-203ENST00000437999 MIA2Q96PC5 1412 aa8.08□□□□□ -1.12
CCDC93-203ENST00000437999 ADGBQ8N7X0 1667 aa8.08□□□□□ -1.12
CCDC93-203ENST00000437999 PLXNC1O60486 1568 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 ARHGEF5Q12774 1597 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 TSPY4P0CV99 314 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 TSPY10P0CW01 314 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 PDE4DQ08499 809 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
CCDC93-203ENST00000437999 ESF1Q9H501 851 aaKnown RBP8.07□□□□□ -1.12
CCDC93-203ENST00000437999 RNF40O75150 1001 aa8.06□□□□□ -1.12
CCDC93-203ENST00000437999 CLCN1P35523 988 aa8.06□□□□□ -1.12
CCDC93-203ENST00000437999 MDM2Q00987 491 aaPredicted RBP8.06□□□□□ -1.12
CCDC93-203ENST00000437999 SWT1Q5T5J6 900 aaKnown RBP8.06□□□□□ -1.12
CCDC93-203ENST00000437999 GGT6Q6P531 493 aa8.06□□□□□ -1.12
CCDC93-203ENST00000437999 Q6ZNB5 142 aa8.06□□□□□ -1.12
CCDC93-203ENST00000437999 MTRQ99707 1265 aa8.06□□□□□ -1.12
CCDC93-203ENST00000437999 TMUB1Q9BVT8 246 aa8.06□□□□□ -1.12
CCDC93-203ENST00000437999 PTPN23Q9H3S7 1636 aa8.05□□□□□ -1.12
CCDC93-203ENST00000437999 LAPTM4AQ15012 233 aa8.05□□□□□ -1.12
CCDC93-203ENST00000437999 GPCPD1Q9NPB8 672 aa8.05□□□□□ -1.12
CCDC93-203ENST00000437999 DHX29Q7Z478 1369 aaKnown RBP8.05□□□□□ -1.12
CCDC93-203ENST00000437999 LMTK3Q96Q04 1460 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms