RNA–Protein interactions for RNA: ENST00000435489.6

NIPAL4-202, Transcript of NIPA like domain containing 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NIPAL4, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4-202ENST00000435489 MEX3CQ5U5Q3 659 aaKnown RBP28.39■■■□□ 2.13
NIPAL4-202ENST00000435489 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
NIPAL4-202ENST00000435489 COL22A1Q8NFW1 1626 aaPredicted RBP28.37■■■□□ 2.13
NIPAL4-202ENST00000435489 TRPM3Q9HCF6 1732 aaPredicted RBP28.36■■■□□ 2.13
NIPAL4-202ENST00000435489 ADAMTS2O95450 1211 aa28.35■■■□□ 2.13
NIPAL4-202ENST00000435489 TMC1Q8TDI8 760 aa28.35■■■□□ 2.13
NIPAL4-202ENST00000435489 ZNF692Q9BU19 519 aaPredicted RBP28.34■■■□□ 2.13
NIPAL4-202ENST00000435489 SLC12A5Q9H2X9 1139 aa28.33■■■□□ 2.13
NIPAL4-202ENST00000435489 PLEKHG5O94827 1062 aa28.32■■■□□ 2.12
NIPAL4-202ENST00000435489 CABLES1Q8TDN4 633 aa28.32■■■□□ 2.12
NIPAL4-202ENST00000435489 RGS17Q9UGC6 210 aaPredicted RBP28.32■■■□□ 2.12
NIPAL4-202ENST00000435489 USP6P35125 1406 aa28.31■■■□□ 2.12
NIPAL4-202ENST00000435489 ALS2Q96Q42 1657 aa28.3■■■□□ 2.12
NIPAL4-202ENST00000435489 BRD4O60885 1362 aaPredicted RBP28.29■■■□□ 2.12
NIPAL4-202ENST00000435489 CPSF1Q10570 1443 aaKnown RBP28.29■■■□□ 2.12
NIPAL4-202ENST00000435489 ABTB2Q8N961 1025 aa28.29■■■□□ 2.12
NIPAL4-202ENST00000435489 C8orf37Q96NL8 207 aa28.29■■■□□ 2.12
NIPAL4-202ENST00000435489 HAP1P54257 671 aaPredicted RBP28.28■■■□□ 2.12
NIPAL4-202ENST00000435489 NUTM2GQ5VZR2 741 aa28.27■■■□□ 2.12
NIPAL4-202ENST00000435489 KTN1Q86UP2 1357 aaKnown RBP28.26■■■□□ 2.11
NIPAL4-202ENST00000435489 SSH2Q76I76 1423 aa28.26■■■□□ 2.11
NIPAL4-202ENST00000435489 NGLY1Q96IV0 654 aa28.25■■■□□ 2.11
NIPAL4-202ENST00000435489 HDGFL2Q7Z4V5 671 aaPredicted RBP28.25■■■□□ 2.11
NIPAL4-202ENST00000435489 TERF2IPQ9NYB0 399 aa28.25■■■□□ 2.11
NIPAL4-202ENST00000435489 NINLQ9Y2I6 1382 aa28.24■■■□□ 2.11
NIPAL4-202ENST00000435489 CD163L1Q9NR16 1453 aa28.24■■■□□ 2.11
NIPAL4-202ENST00000435489 TTC21BQ7Z4L5 1316 aa28.23■■■□□ 2.11
NIPAL4-202ENST00000435489 AFF2P51816 1311 aa28.22■■■□□ 2.11
NIPAL4-202ENST00000435489 AKAP12Q02952 1782 aa28.21■■■□□ 2.11
NIPAL4-202ENST00000435489 ZNF772Q68DY9 489 aaPredicted RBP28.2■■■□□ 2.1
NIPAL4-202ENST00000435489 NLRP13Q86W25 1043 aa28.2■■■□□ 2.1
NIPAL4-202ENST00000435489 A0A1W2PP64 1363 aa28.19■■■□□ 2.1
NIPAL4-202ENST00000435489 POTEAQ6S8J7 498 aa28.19■■■□□ 2.1
NIPAL4-202ENST00000435489 TTC21AQ8NDW8 1320 aa28.18■■■□□ 2.1
NIPAL4-202ENST00000435489 NLRP6P59044 892 aa28.18■■■□□ 2.1
NIPAL4-202ENST00000435489 FNBP4Q8N3X1 1017 aaPredicted RBP28.18■■■□□ 2.1
NIPAL4-202ENST00000435489 MIER1Q8N108 512 aa28.18■■■□□ 2.1
NIPAL4-202ENST00000435489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.17■■■□□ 2.1
NIPAL4-202ENST00000435489 ILDR2Q71H61 639 aa28.16■■■□□ 2.1
NIPAL4-202ENST00000435489 ABCA3Q99758 1704 aa28.15■■■□□ 2.1
NIPAL4-202ENST00000435489 USP19O94966 1318 aa28.15■■■□□ 2.1
NIPAL4-202ENST00000435489 USP21Q9UK80 565 aa28.14■■■□□ 2.1
NIPAL4-202ENST00000435489 MON2Q7Z3U7 1717 aa28.14■■■□□ 2.1
NIPAL4-202ENST00000435489 ANP32CO43423 234 aa28.14■■■□□ 2.09
NIPAL4-202ENST00000435489 ANKRD36BQ8N2N9 1353 aa28.13■■■□□ 2.09
NIPAL4-202ENST00000435489 MARF1Q9Y4F3 1742 aaKnown RBP28.13■■■□□ 2.09
NIPAL4-202ENST00000435489 EDC4Q6P2E9 1401 aaKnown RBP28.13■■■□□ 2.09
NIPAL4-202ENST00000435489 FAM83GA6ND36 823 aa28.13■■■□□ 2.09
NIPAL4-202ENST00000435489 PANK3Q9H999 370 aa28.13■■■□□ 2.09
NIPAL4-202ENST00000435489 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
NIPAL4-202ENST00000435489 NRKQ7Z2Y5 1582 aa28.12■■■□□ 2.09
NIPAL4-202ENST00000435489 GCP02774 474 aa28.11■■■□□ 2.09
NIPAL4-202ENST00000435489 QTRT2Q9H974 415 aaKnown RBP28.1■■■□□ 2.09
NIPAL4-202ENST00000435489 PIK3C2AO00443 1686 aa28.1■■■□□ 2.09
NIPAL4-202ENST00000435489 ZC3H6P61129 1189 aaKnown RBP28.1■■■□□ 2.09
NIPAL4-202ENST00000435489 NME9Q86XW9 330 aa28.1■■■□□ 2.09
NIPAL4-202ENST00000435489 PRDM11Q9NQV5 511 aa28.08■■■□□ 2.09
NIPAL4-202ENST00000435489 ZRANB1Q9UGI0 708 aa28.08■■■□□ 2.09
NIPAL4-202ENST00000435489 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
NIPAL4-202ENST00000435489 SLIT2O94813 1529 aa28.08■■■□□ 2.09
NIPAL4-202ENST00000435489 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
NIPAL4-202ENST00000435489 KIAA0232Q92628 1395 aa28.07■■■□□ 2.08
NIPAL4-202ENST00000435489 PER1O15534 1290 aaPredicted RBP28.06■■■□□ 2.08
NIPAL4-202ENST00000435489 UNC5CLQ8IV45 518 aa28.06■■■□□ 2.08
NIPAL4-202ENST00000435489 USP31Q70CQ4 1352 aa28.05■■■□□ 2.08
NIPAL4-202ENST00000435489 TRPC5Q9UL62 973 aaPredicted RBP28.04■■■□□ 2.08
NIPAL4-202ENST00000435489 MYOM1P52179 1685 aa28.04■■■□□ 2.08
NIPAL4-202ENST00000435489 CHRNA2Q15822 529 aa28.03■■■□□ 2.08
NIPAL4-202ENST00000435489 CARD14Q9BXL6 1004 aa28.03■■■□□ 2.08
NIPAL4-202ENST00000435489 BTG4Q9NY30 223 aa28.03■■■□□ 2.08
NIPAL4-202ENST00000435489 RXRBP28702 533 aa28.03■■■□□ 2.08
NIPAL4-202ENST00000435489 SLIT3O75094 1523 aa28.02■■■□□ 2.08
NIPAL4-202ENST00000435489 KCNH5Q8NCM2 988 aa28.02■■■□□ 2.08
NIPAL4-202ENST00000435489 CPDO75976 1380 aa28.02■■■□□ 2.08
NIPAL4-202ENST00000435489 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
NIPAL4-202ENST00000435489 SOX12O15370 315 aa28■■■□□ 2.07
NIPAL4-202ENST00000435489 RBM6P78332 1123 aaKnown RBP28■■■□□ 2.07
NIPAL4-202ENST00000435489 ATRNO75882 1429 aa27.99■■■□□ 2.07
NIPAL4-202ENST00000435489 COL14A1Q05707 1796 aaKnown RBP27.99■■■□□ 2.07
NIPAL4-202ENST00000435489 PRKRIP1Q9H875 184 aaPredicted RBP27.99■■■□□ 2.07
NIPAL4-202ENST00000435489 FYB1O15117 783 aa27.98■■■□□ 2.07
NIPAL4-202ENST00000435489 PLCH1Q4KWH8 1693 aa27.97■■■□□ 2.07
NIPAL4-202ENST00000435489 ZBTB7CA1YPR0 619 aa27.96■■■□□ 2.07
NIPAL4-202ENST00000435489 COG3Q96JB2 828 aa27.96■■■□□ 2.07
NIPAL4-202ENST00000435489 OVOS2A0A0J9YW53 1432 aa27.95■■■□□ 2.07
NIPAL4-202ENST00000435489 OVOS2Q6IE36 1432 aa27.95■■■□□ 2.07
NIPAL4-202ENST00000435489 NWD2Q9ULI1 1742 aa27.95■■■□□ 2.07
NIPAL4-202ENST00000435489 VPS72Q15906 364 aa27.95■■■□□ 2.06
NIPAL4-202ENST00000435489 ARHGEF25Q86VW2 580 aa27.95■■■□□ 2.06
NIPAL4-202ENST00000435489 GJD4Q96KN9 370 aaPredicted RBP27.95■■■□□ 2.06
NIPAL4-202ENST00000435489 NSD3Q9BZ95 1437 aa27.95■■■□□ 2.06
NIPAL4-202ENST00000435489 GGNBP2Q9H3C7 697 aa27.94■■■□□ 2.06
NIPAL4-202ENST00000435489 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.94■■■□□ 2.06
NIPAL4-202ENST00000435489 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
NIPAL4-202ENST00000435489 CCER2I3L3R5 266 aa27.92■■■□□ 2.06
NIPAL4-202ENST00000435489 CCDC9Q9Y3X0 531 aaKnown RBP27.92■■■□□ 2.06
NIPAL4-202ENST00000435489 AATKQ6ZMQ8 1374 aa27.91■■■□□ 2.06
NIPAL4-202ENST00000435489 NFAT5O94916 1531 aa27.91■■■□□ 2.06
NIPAL4-202ENST00000435489 RALBP1Q15311 655 aa27.9■■■□□ 2.06
NIPAL4-202ENST00000435489 STRN4Q9NRL3 753 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms