RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
LIMK1-203ENST00000435201 MYH16Q9H6N6 1097 aa21.71■■□□□ 1.07
LIMK1-203ENST00000435201 U2SURPO15042 1029 aaKnown RBP21.7■■□□□ 1.06
LIMK1-203ENST00000435201 PNNQ9H307 717 aaKnown RBP21.7■■□□□ 1.06
LIMK1-203ENST00000435201 PLEKHG1Q9ULL1 1385 aa21.7■■□□□ 1.06
LIMK1-203ENST00000435201 DIAPH1O60610 1272 aaKnown RBP21.69■■□□□ 1.06
LIMK1-203ENST00000435201 PLEKHF1Q96S99 279 aa21.69■■□□□ 1.06
LIMK1-203ENST00000435201 ADAMTS13Q76LX8 1427 aa21.69■■□□□ 1.06
LIMK1-203ENST00000435201 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
LIMK1-203ENST00000435201 ITSN1Q15811 1721 aa21.68■■□□□ 1.06
LIMK1-203ENST00000435201 AKAP12Q02952 1782 aa21.68■■□□□ 1.06
LIMK1-203ENST00000435201 C3P01024 1663 aa21.67■■□□□ 1.06
LIMK1-203ENST00000435201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.66■■□□□ 1.06
LIMK1-203ENST00000435201 NUDT16Q96DE0 195 aaKnown RBP21.66■■□□□ 1.06
LIMK1-203ENST00000435201 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
LIMK1-203ENST00000435201 CCDC61Q9Y6R9 512 aa21.65■■□□□ 1.06
LIMK1-203ENST00000435201 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.06
LIMK1-203ENST00000435201 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.06
LIMK1-203ENST00000435201 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.06
LIMK1-203ENST00000435201 FER1L4A9Z1Z3 1794 aa21.64■■□□□ 1.06
LIMK1-203ENST00000435201 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
LIMK1-203ENST00000435201 SLIT1O75093 1534 aa21.63■■□□□ 1.05
LIMK1-203ENST00000435201 ANP32AP39687 249 aaKnown RBP21.63■■□□□ 1.05
LIMK1-203ENST00000435201 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
LIMK1-203ENST00000435201 ROBO2Q9HCK4 1378 aa21.62■■□□□ 1.05
LIMK1-203ENST00000435201 IL16Q14005 1332 aa21.62■■□□□ 1.05
LIMK1-203ENST00000435201 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
LIMK1-203ENST00000435201 POLKQ9UBT6 870 aa21.62■■□□□ 1.05
LIMK1-203ENST00000435201 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
LIMK1-203ENST00000435201 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
LIMK1-203ENST00000435201 FCHSD2O94868 740 aa21.61■■□□□ 1.05
LIMK1-203ENST00000435201 PDE4AP27815 886 aa21.61■■□□□ 1.05
LIMK1-203ENST00000435201 TOPAZ1Q8N9V7 1692 aa21.61■■□□□ 1.05
LIMK1-203ENST00000435201 ARHGAP23Q9P227 1491 aa21.61■■□□□ 1.05
LIMK1-203ENST00000435201 AAMPQ13685 434 aa21.6■■□□□ 1.05
LIMK1-203ENST00000435201 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.6■■□□□ 1.05
LIMK1-203ENST00000435201 ZNF692Q9BU19 519 aaPredicted RBP21.6■■□□□ 1.05
LIMK1-203ENST00000435201 BACH2Q9BYV9 841 aa21.6■■□□□ 1.05
LIMK1-203ENST00000435201 EID1Q9Y6B2 187 aa21.6■■□□□ 1.05
LIMK1-203ENST00000435201 LTKP29376 864 aa21.59■■□□□ 1.05
LIMK1-203ENST00000435201 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
LIMK1-203ENST00000435201 NME9Q86XW9 330 aa21.57■■□□□ 1.04
LIMK1-203ENST00000435201 COG3Q96JB2 828 aa21.57■■□□□ 1.04
LIMK1-203ENST00000435201 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
LIMK1-203ENST00000435201 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
LIMK1-203ENST00000435201 NEFMP07197 916 aa21.56■■□□□ 1.04
LIMK1-203ENST00000435201 CEBPAP49715 358 aaPredicted RBP21.56■■□□□ 1.04
LIMK1-203ENST00000435201 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
LIMK1-203ENST00000435201 PRR36Q9H6K5 1346 aa21.56■■□□□ 1.04
LIMK1-203ENST00000435201 RIPK4P57078 832 aa21.56■■□□□ 1.04
LIMK1-203ENST00000435201 PANK1Q8TE04 598 aa21.55■■□□□ 1.04
LIMK1-203ENST00000435201 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
LIMK1-203ENST00000435201 RSPH6AQ9H0K4 717 aa21.55■■□□□ 1.04
LIMK1-203ENST00000435201 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
LIMK1-203ENST00000435201 IPO9Q96P70 1041 aaKnown RBP21.54■■□□□ 1.04
LIMK1-203ENST00000435201 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
LIMK1-203ENST00000435201 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
LIMK1-203ENST00000435201 PTCH1Q13635 1447 aa21.53■■□□□ 1.04
LIMK1-203ENST00000435201 PTPRUQ92729 1446 aa21.53■■□□□ 1.04
LIMK1-203ENST00000435201 PRKAR2BP31323 418 aa21.52■■□□□ 1.03
LIMK1-203ENST00000435201 TSR2Q969E8 191 aaKnown RBP21.52■■□□□ 1.03
LIMK1-203ENST00000435201 NOP58Q9Y2X3 529 aaKnown RBP21.52■■□□□ 1.03
LIMK1-203ENST00000435201 EMILIN1Q9Y6C2 1016 aa21.52■■□□□ 1.03
LIMK1-203ENST00000435201 TBX22Q9Y458 520 aa21.51■■□□□ 1.03
LIMK1-203ENST00000435201 PLEKHG3A1L390 1219 aa21.5■■□□□ 1.03
LIMK1-203ENST00000435201 FBLN1P23142 703 aa21.5■■□□□ 1.03
LIMK1-203ENST00000435201 IL13P35225 146 aa21.5■■□□□ 1.03
LIMK1-203ENST00000435201 THEMISQ8N1K5 641 aaPredicted RBP21.5■■□□□ 1.03
LIMK1-203ENST00000435201 EXOSC9Q06265 439 aaKnown RBP21.49■■□□□ 1.03
LIMK1-203ENST00000435201 ZKSCAN2Q63HK3 967 aa21.49■■□□□ 1.03
LIMK1-203ENST00000435201 SKAP1Q86WV1 359 aa21.49■■□□□ 1.03
LIMK1-203ENST00000435201 BCL2L13Q9BXK5 485 aa21.49■■□□□ 1.03
LIMK1-203ENST00000435201 ZRANB1Q9UGI0 708 aa21.49■■□□□ 1.03
LIMK1-203ENST00000435201 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
LIMK1-203ENST00000435201 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
LIMK1-203ENST00000435201 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
LIMK1-203ENST00000435201 TTC21BQ7Z4L5 1316 aa21.47■■□□□ 1.03
LIMK1-203ENST00000435201 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
LIMK1-203ENST00000435201 PMFBP1Q8TBY8 1022 aa21.47■■□□□ 1.03
LIMK1-203ENST00000435201 USP6P35125 1406 aa21.47■■□□□ 1.03
LIMK1-203ENST00000435201 ACEP12821 1306 aa21.46■■□□□ 1.03
LIMK1-203ENST00000435201 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
LIMK1-203ENST00000435201 OVOS2A0A0J9YW53 1432 aa21.46■■□□□ 1.03
LIMK1-203ENST00000435201 OVOS2Q6IE36 1432 aa21.46■■□□□ 1.03
LIMK1-203ENST00000435201 XRN1Q8IZH2 1706 aaKnown RBP21.46■■□□□ 1.03
LIMK1-203ENST00000435201 RIMS1Q86UR5 1692 aaKnown RBP21.46■■□□□ 1.03
LIMK1-203ENST00000435201 RLBP1P12271 317 aa21.45■■□□□ 1.02
LIMK1-203ENST00000435201 SMC4Q9NTJ3 1288 aa21.45■■□□□ 1.02
LIMK1-203ENST00000435201 IGHDP01880 384 aa21.45■■□□□ 1.02
LIMK1-203ENST00000435201 HMOX1P09601 288 aa21.44■■□□□ 1.02
LIMK1-203ENST00000435201 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
LIMK1-203ENST00000435201 MVPQ14764 893 aaKnown RBP21.43■■□□□ 1.02
LIMK1-203ENST00000435201 FTSJ3Q8IY81 847 aaKnown RBP21.43■■□□□ 1.02
LIMK1-203ENST00000435201 DZIP1LQ8IYY4 767 aaKnown RBP21.43■■□□□ 1.02
LIMK1-203ENST00000435201 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
LIMK1-203ENST00000435201 ZBTB47Q9UFB7 747 aaPredicted RBP21.43■■□□□ 1.02
LIMK1-203ENST00000435201 CEP170BQ9Y4F5 1589 aaPredicted RBP21.42■■□□□ 1.02
LIMK1-203ENST00000435201 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
LIMK1-203ENST00000435201 ZNF428Q96B54 188 aa21.42■■□□□ 1.02
LIMK1-203ENST00000435201 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms