RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 CD163L1Q9NR16 1453 aa22.24■■□□□ 1.15
SEMA3B-204ENST00000433753 ZFYVE9O95405 1425 aa22.24■■□□□ 1.15
SEMA3B-204ENST00000433753 MVPQ14764 893 aaKnown RBP22.23■■□□□ 1.15
SEMA3B-204ENST00000433753 SSH1Q8WYL5 1049 aa22.23■■□□□ 1.15
SEMA3B-204ENST00000433753 DZIP1LQ8IYY4 767 aaKnown RBP22.23■■□□□ 1.15
SEMA3B-204ENST00000433753 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
SEMA3B-204ENST00000433753 MLECQ14165 292 aa22.22■■□□□ 1.15
SEMA3B-204ENST00000433753 ATAD2Q6PL18 1390 aa22.21■■□□□ 1.15
SEMA3B-204ENST00000433753 DIAPH1O60610 1272 aaKnown RBP22.21■■□□□ 1.15
SEMA3B-204ENST00000433753 TRIM27P14373 513 aa22.21■■□□□ 1.15
SEMA3B-204ENST00000433753 HDGFL2Q7Z4V5 671 aaPredicted RBP22.21■■□□□ 1.15
SEMA3B-204ENST00000433753 PREX1Q8TCU6 1659 aa22.2■■□□□ 1.15
SEMA3B-204ENST00000433753 FAM69CQ0P6D2 419 aa22.2■■□□□ 1.14
SEMA3B-204ENST00000433753 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
SEMA3B-204ENST00000433753 ADGRB2O60241 1585 aa22.19■■□□□ 1.14
SEMA3B-204ENST00000433753 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
SEMA3B-204ENST00000433753 FRAT2O75474 233 aaPredicted RBP22.19■■□□□ 1.14
SEMA3B-204ENST00000433753 NOB1Q9ULX3 412 aaKnown RBP22.19■■□□□ 1.14
SEMA3B-204ENST00000433753 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
SEMA3B-204ENST00000433753 NLRP1Q9C000 1473 aa22.18■■□□□ 1.14
SEMA3B-204ENST00000433753 ALKQ9UM73 1620 aa22.16■■□□□ 1.14
SEMA3B-204ENST00000433753 HMOX1P09601 288 aa22.16■■□□□ 1.14
SEMA3B-204ENST00000433753 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.14
SEMA3B-204ENST00000433753 THUMPD2Q9BTF0 503 aaKnown RBP22.14■■□□□ 1.14
SEMA3B-204ENST00000433753 PRKAR2BP31323 418 aa22.14■■□□□ 1.13
SEMA3B-204ENST00000433753 AAMPQ13685 434 aa22.14■■□□□ 1.13
SEMA3B-204ENST00000433753 ATF7IPQ6VMQ6 1270 aa22.14■■□□□ 1.13
SEMA3B-204ENST00000433753 IL27Q8NEV9 243 aa22.14■■□□□ 1.13
SEMA3B-204ENST00000433753 POLKQ9UBT6 870 aa22.14■■□□□ 1.13
SEMA3B-204ENST00000433753 ZRANB1Q9UGI0 708 aa22.14■■□□□ 1.13
SEMA3B-204ENST00000433753 TMEM57Q8N5G2 664 aa22.13■■□□□ 1.13
SEMA3B-204ENST00000433753 NCKAP5LQ9HCH0 1330 aa22.12■■□□□ 1.13
SEMA3B-204ENST00000433753 PHACTR3Q96KR7 559 aa22.12■■□□□ 1.13
SEMA3B-204ENST00000433753 SLKQ9H2G2 1235 aaPredicted RBP22.12■■□□□ 1.13
SEMA3B-204ENST00000433753 ARHGEF40Q8TER5 1519 aa22.12■■□□□ 1.13
SEMA3B-204ENST00000433753 GSE1Q14687 1217 aa22.11■■□□□ 1.13
SEMA3B-204ENST00000433753 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-204ENST00000433753 EMILIN1Q9Y6C2 1016 aa22.11■■□□□ 1.13
SEMA3B-204ENST00000433753 CT47B1P0C2W7 299 aaPredicted RBP22.1■■□□□ 1.13
SEMA3B-204ENST00000433753 PNPLA6Q8IY17 1366 aa22.09■■□□□ 1.13
SEMA3B-204ENST00000433753 RSPH6AQ9H0K4 717 aa22.09■■□□□ 1.13
SEMA3B-204ENST00000433753 NME9Q86XW9 330 aa22.08■■□□□ 1.13
SEMA3B-204ENST00000433753 TSPOAP1O95153 1857 aa22.08■■□□□ 1.13
SEMA3B-204ENST00000433753 ELL2O00472 640 aaPredicted RBP22.08■■□□□ 1.12
SEMA3B-204ENST00000433753 FCHSD2O94868 740 aa22.08■■□□□ 1.12
SEMA3B-204ENST00000433753 TXNDC2Q86VQ3 553 aa22.08■■□□□ 1.12
SEMA3B-204ENST00000433753 DDX19BQ9UMR2 479 aa22.08■■□□□ 1.12
SEMA3B-204ENST00000433753 RTN4Q9NQC3 1192 aaKnown RBP22.07■■□□□ 1.12
SEMA3B-204ENST00000433753 IL16Q14005 1332 aa22.06■■□□□ 1.12
SEMA3B-204ENST00000433753 SPRYD3Q8NCJ5 442 aa22.06■■□□□ 1.12
SEMA3B-204ENST00000433753 TBC1D32Q96NH3 1257 aa22.06■■□□□ 1.12
SEMA3B-204ENST00000433753 MED14O60244 1454 aa22.06■■□□□ 1.12
SEMA3B-204ENST00000433753 UPF2Q9HAU5 1272 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-204ENST00000433753 CLTCQ00610 1675 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-204ENST00000433753 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
SEMA3B-204ENST00000433753 ANKRD26Q9UPS8 1709 aa22.04■■□□□ 1.12
SEMA3B-204ENST00000433753 TSPYL6Q8N831 410 aa22.04■■□□□ 1.12
SEMA3B-204ENST00000433753 RIMS2Q9UQ26 1411 aa22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 A2ML1A8K2U0 1454 aa22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 BECN1Q14457 450 aa22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 RRS1Q15050 365 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 PNNQ9H307 717 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 LRRC7Q96NW7 1537 aa22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 MFAP1P55081 439 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 HDAC1Q13547 482 aaPredicted RBP22.03■■□□□ 1.12
SEMA3B-204ENST00000433753 TBC1D2Q9BYX2 928 aa22.02■■□□□ 1.12
SEMA3B-204ENST00000433753 METP08581 1390 aa22.01■■□□□ 1.11
SEMA3B-204ENST00000433753 WASLO00401 505 aaPredicted RBP22■■□□□ 1.11
SEMA3B-204ENST00000433753 BRPF3Q9ULD4 1205 aa22■■□□□ 1.11
SEMA3B-204ENST00000433753 IPO8O15397 1037 aaKnown RBP22■■□□□ 1.11
SEMA3B-204ENST00000433753 C1orf115Q9H7X2 142 aa22■■□□□ 1.11
SEMA3B-204ENST00000433753 MAP2P11137 1827 aaKnown RBP21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 KIF20BQ96Q89 1820 aa21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 KIF16BQ96L93 1317 aa21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 NFE2L2Q16236 605 aa21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 FAM83GA6ND36 823 aa21.99■■□□□ 1.11
SEMA3B-204ENST00000433753 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
SEMA3B-204ENST00000433753 IL13P35225 146 aa21.98■■□□□ 1.11
SEMA3B-204ENST00000433753 SMC5Q8IY18 1101 aa21.98■■□□□ 1.11
SEMA3B-204ENST00000433753 NUDT16Q96DE0 195 aaKnown RBP21.98■■□□□ 1.11
SEMA3B-204ENST00000433753 VAMP4O75379 141 aa21.97■■□□□ 1.11
SEMA3B-204ENST00000433753 DCTN1Q14203 1278 aa21.97■■□□□ 1.11
SEMA3B-204ENST00000433753 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
SEMA3B-204ENST00000433753 ALDH1L2Q3SY69 923 aa21.96■■□□□ 1.11
SEMA3B-204ENST00000433753 C22orf23Q9BZE7 217 aa21.95■■□□□ 1.1
SEMA3B-204ENST00000433753 ANTXR1Q9H6X2 564 aa21.95■■□□□ 1.1
SEMA3B-204ENST00000433753 MBIPQ9NS73 344 aa21.95■■□□□ 1.1
SEMA3B-204ENST00000433753 ATP7BP35670 1465 aa21.93■■□□□ 1.1
SEMA3B-204ENST00000433753 MRPL50Q8N5N7 158 aaKnown RBP21.93■■□□□ 1.1
SEMA3B-204ENST00000433753 ZMYM3Q14202 1370 aa21.93■■□□□ 1.1
SEMA3B-204ENST00000433753 C8orf58Q8NAV2 365 aa21.93■■□□□ 1.1
SEMA3B-204ENST00000433753 COG3Q96JB2 828 aa21.93■■□□□ 1.1
SEMA3B-204ENST00000433753 CPSF1Q10570 1443 aaKnown RBP21.92■■□□□ 1.1
SEMA3B-204ENST00000433753 ZBTB7BO15156 539 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-204ENST00000433753 NUCB1Q02818 461 aa21.91■■□□□ 1.1
SEMA3B-204ENST00000433753 CCDC61Q9Y6R9 512 aa21.91■■□□□ 1.1
SEMA3B-204ENST00000433753 DIP2BQ9P265 1576 aa21.91■■□□□ 1.1
SEMA3B-204ENST00000433753 CPS1P31327 1500 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms