RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 DUSP27Q5VZP5 1158 aa15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 ZNF530Q6P9A1 599 aaPredicted RBP15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 DDX54Q8TDD1 881 aaKnown RBP15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 PDZRN3Q9UPQ7 1066 aa15.49■□□□□ 0.07
LRRTM1-206ENST00000433224 TEX14Q8IWB6 1497 aa15.48■□□□□ 0.07
LRRTM1-206ENST00000433224 HSPA2P54652 639 aa15.48■□□□□ 0.07
LRRTM1-206ENST00000433224 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
LRRTM1-206ENST00000433224 FCHSD2O94868 740 aa15.48■□□□□ 0.07
LRRTM1-206ENST00000433224 ARID3AQ99856 593 aa15.47■□□□□ 0.07
LRRTM1-206ENST00000433224 TNRQ92752 1358 aa15.47■□□□□ 0.07
LRRTM1-206ENST00000433224 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 ATF7IPQ6VMQ6 1270 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 AEBP1Q8IUX7 1158 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 YEATS2Q9ULM3 1422 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 NUTM2BA6NNL0 878 aaPredicted RBP15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 NUTM2EB1AL46 878 aaPredicted RBP15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 DNTTIP2Q5QJE6 756 aaKnown RBP15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 NUTM2AQ8IVF1 878 aaPredicted RBP15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 WDR63Q8IWG1 891 aa15.46■□□□□ 0.07
LRRTM1-206ENST00000433224 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.06
LRRTM1-206ENST00000433224 FAM177BA6PVY3 158 aa15.46■□□□□ 0.06
LRRTM1-206ENST00000433224 TMEM57Q8N5G2 664 aa15.46■□□□□ 0.06
LRRTM1-206ENST00000433224 TNNQ9UQP3 1299 aa15.46■□□□□ 0.06
LRRTM1-206ENST00000433224 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
LRRTM1-206ENST00000433224 GAS2L2Q8NHY3 880 aa15.45■□□□□ 0.06
LRRTM1-206ENST00000433224 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
LRRTM1-206ENST00000433224 PRDM11Q9NQV5 511 aa15.45■□□□□ 0.06
LRRTM1-206ENST00000433224 ADGRL2O95490 1459 aa15.44■□□□□ 0.06
LRRTM1-206ENST00000433224 MCCP23508 829 aa15.44■□□□□ 0.06
LRRTM1-206ENST00000433224 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
LRRTM1-206ENST00000433224 ABCA8O94911 1581 aa15.44■□□□□ 0.06
LRRTM1-206ENST00000433224 ZMYM3Q14202 1370 aa15.44■□□□□ 0.06
LRRTM1-206ENST00000433224 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
LRRTM1-206ENST00000433224 PIP4K2BP78356 416 aa15.43■□□□□ 0.06
LRRTM1-206ENST00000433224 RIC3Q7Z5B4 369 aa15.43■□□□□ 0.06
LRRTM1-206ENST00000433224 PDE3AQ14432 1141 aa15.43■□□□□ 0.06
LRRTM1-206ENST00000433224 F6X3S4 739 aa15.42■□□□□ 0.06
LRRTM1-206ENST00000433224 MYL6BP14649 208 aa15.42■□□□□ 0.06
LRRTM1-206ENST00000433224 NEXNQ0ZGT2 675 aa15.42■□□□□ 0.06
LRRTM1-206ENST00000433224 CHRNA2Q15822 529 aa15.42■□□□□ 0.06
LRRTM1-206ENST00000433224 KCNA6P17658 529 aa15.42■□□□□ 0.06
LRRTM1-206ENST00000433224 GBP4Q96PP9 640 aa15.42■□□□□ 0.06
LRRTM1-206ENST00000433224 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
LRRTM1-206ENST00000433224 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
LRRTM1-206ENST00000433224 MPRIPQ6WCQ1 1025 aa15.41■□□□□ 0.06
LRRTM1-206ENST00000433224 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
LRRTM1-206ENST00000433224 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
LRRTM1-206ENST00000433224 PLEKHO1Q53GL0 409 aaPredicted RBP15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 UBTFL1P0CB47 393 aaPredicted RBP15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 MSNP26038 577 aaKnown RBP15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 TTC37Q6PGP7 1564 aa15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 ARHGEF12Q9NZN5 1544 aa15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 ANXA1P04083 346 aa15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
LRRTM1-206ENST00000433224 KRT24Q2M2I5 525 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 UGGT1Q9NYU2 1555 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 CABLES1Q8TDN4 633 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 PHACTR3Q96KR7 559 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 CHD1O14646 1710 aa15.39■□□□□ 0.05
LRRTM1-206ENST00000433224 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
LRRTM1-206ENST00000433224 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
LRRTM1-206ENST00000433224 PTCD1O75127 700 aaKnown RBP15.38■□□□□ 0.05
LRRTM1-206ENST00000433224 CCDC30Q5VVM6 783 aa15.38■□□□□ 0.05
LRRTM1-206ENST00000433224 NPATQ14207 1427 aa15.37■□□□□ 0.05
LRRTM1-206ENST00000433224 SAMD9LQ8IVG5 1584 aa15.37■□□□□ 0.05
LRRTM1-206ENST00000433224 A0A1W2PP64 1363 aa15.37■□□□□ 0.05
LRRTM1-206ENST00000433224 KAT6BQ8WYB5 2073 aa15.37■□□□□ 0.05
LRRTM1-206ENST00000433224 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
LRRTM1-206ENST00000433224 TRIM27P14373 513 aa15.36■□□□□ 0.05
LRRTM1-206ENST00000433224 SIL1Q9H173 461 aa15.36■□□□□ 0.05
LRRTM1-206ENST00000433224 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
LRRTM1-206ENST00000433224 LTKP29376 864 aa15.36■□□□□ 0.05
LRRTM1-206ENST00000433224 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 CCDC85AQ96PX6 553 aaPredicted RBP15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
LRRTM1-206ENST00000433224 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 IFIT2P09913 472 aaKnown RBP15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 NEUROD6Q96NK8 337 aa15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 C22orf23Q9BZE7 217 aa15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 KRT28Q7Z3Y7 464 aa15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 PPIP5K1Q6PFW1 1433 aa15.34■□□□□ 0.05
LRRTM1-206ENST00000433224 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.05
LRRTM1-206ENST00000433224 ISY1Q9ULR0 285 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms