RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 NAP1L5Q96NT1 182 aaPredicted RBP12.06□□□□□ -0.48
FN1-209ENST00000432072 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 MSH6P52701 1360 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
FN1-209ENST00000432072 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
FN1-209ENST00000432072 GOLGA6L19H0YKK7 550 aa12.05□□□□□ -0.48
FN1-209ENST00000432072 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
FN1-209ENST00000432072 REC8O95072 547 aa12.05□□□□□ -0.48
FN1-209ENST00000432072 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
FN1-209ENST00000432072 SLKQ9H2G2 1235 aaPredicted RBP12.05□□□□□ -0.48
FN1-209ENST00000432072 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
FN1-209ENST00000432072 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
FN1-209ENST00000432072 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
FN1-209ENST00000432072 CABP1Q9NZU7 370 aa12.04□□□□□ -0.48
FN1-209ENST00000432072 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.04□□□□□ -0.48
FN1-209ENST00000432072 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
FN1-209ENST00000432072 LRRC9Q6ZRR7 1453 aa12.04□□□□□ -0.48
FN1-209ENST00000432072 AKNAQ7Z591 1439 aa12.04□□□□□ -0.48
FN1-209ENST00000432072 FOXD4L6Q3SYB3 417 aaPredicted RBP12.04□□□□□ -0.48
FN1-209ENST00000432072 SULT6B1Q6IMI4 303 aa12.04□□□□□ -0.48
FN1-209ENST00000432072 FOXD4L3Q6VB84 417 aaPredicted RBP12.04□□□□□ -0.48
FN1-209ENST00000432072 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
FN1-209ENST00000432072 GZF1Q9H116 711 aaPredicted RBP12.03□□□□□ -0.48
FN1-209ENST00000432072 AK7Q96M32 723 aa12.03□□□□□ -0.48
FN1-209ENST00000432072 EXOC5O00471 708 aa12.03□□□□□ -0.48
FN1-209ENST00000432072 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
FN1-209ENST00000432072 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
FN1-209ENST00000432072 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
FN1-209ENST00000432072 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
FN1-209ENST00000432072 ADGRL1O94910 1474 aa12.02□□□□□ -0.48
FN1-209ENST00000432072 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.48
FN1-209ENST00000432072 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.48
FN1-209ENST00000432072 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.48
FN1-209ENST00000432072 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.49
FN1-209ENST00000432072 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
FN1-209ENST00000432072 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.49
FN1-209ENST00000432072 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.49
FN1-209ENST00000432072 FOSBP53539 338 aa12.02□□□□□ -0.49
FN1-209ENST00000432072 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.49
FN1-209ENST00000432072 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
FN1-209ENST00000432072 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
FN1-209ENST00000432072 TEX14Q8IWB6 1497 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
FN1-209ENST00000432072 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 CDK5RAP3Q96JB5 506 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 ZFYVE27Q5T4F4 411 aa12.01□□□□□ -0.49
FN1-209ENST00000432072 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
FN1-209ENST00000432072 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
FN1-209ENST00000432072 GRM1Q13255 1194 aa12□□□□□ -0.49
FN1-209ENST00000432072 BECN2A8MW95 431 aa12□□□□□ -0.49
FN1-209ENST00000432072 FOXO3O43524 673 aa12□□□□□ -0.49
FN1-209ENST00000432072 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
FN1-209ENST00000432072 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
FN1-209ENST00000432072 FAM161AQ3B820 660 aa12□□□□□ -0.49
FN1-209ENST00000432072 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
FN1-209ENST00000432072 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 PRKAR2BP31323 418 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 WDR78Q5VTH9 848 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 FSD1Q9BTV5 496 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 RFC4P35249 363 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
FN1-209ENST00000432072 RPGRIP1LQ68CZ1 1315 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 CHMP4BP1P59074 171 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 NBPF8Q3BBV2 869 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 NBPF14Q5TI25 921 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 KDM4AO75164 1064 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
FN1-209ENST00000432072 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 FAM135AQ9P2D6 1515 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 GNAI3P08754 354 aa11.98□□□□□ -0.49
FN1-209ENST00000432072 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
FN1-209ENST00000432072 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
FN1-209ENST00000432072 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
FN1-209ENST00000432072 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
FN1-209ENST00000432072 ZNF622Q969S3 477 aaKnown RBP eCLIP11.97□□□□□ -0.49
FN1-209ENST00000432072 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
FN1-209ENST00000432072 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
FN1-209ENST00000432072 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
FN1-209ENST00000432072 LRP2BPQ9P2M1 347 aa11.96□□□□□ -0.49
FN1-209ENST00000432072 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
FN1-209ENST00000432072 DENND4BO75064 1496 aaPredicted RBP11.96□□□□□ -0.49
FN1-209ENST00000432072 POLD1P28340 1107 aa11.96□□□□□ -0.49
FN1-209ENST00000432072 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.49
FN1-209ENST00000432072 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
FN1-209ENST00000432072 HIP1O00291 1037 aa11.96□□□□□ -0.5
FN1-209ENST00000432072 ZSCAN25Q6NSZ9 544 aa11.96□□□□□ -0.5
FN1-209ENST00000432072 SIL1Q9H173 461 aa11.96□□□□□ -0.5
FN1-209ENST00000432072 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
FN1-209ENST00000432072 KRT18P05783 430 aaKnown RBP11.96□□□□□ -0.5
FN1-209ENST00000432072 MATR3P43243 847 aaKnown RBP eCLIP11.96□□□□□ -0.59e-7■■□□□ 13.9
FN1-209ENST00000432072 PSMA5P28066 241 aa11.95□□□□□ -0.5
FN1-209ENST00000432072 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms