RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 CCDC27Q2M243 656 aa16.64■□□□□ 0.25
LINC00840-201ENST00000431737 TBX22Q9Y458 520 aa16.64■□□□□ 0.25
LINC00840-201ENST00000431737 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
LINC00840-201ENST00000431737 NUDT16Q96DE0 195 aaKnown RBP16.62■□□□□ 0.25
LINC00840-201ENST00000431737 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
LINC00840-201ENST00000431737 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
LINC00840-201ENST00000431737 CDK12Q9NYV4 1490 aaPredicted RBP16.61■□□□□ 0.25
LINC00840-201ENST00000431737 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
LINC00840-201ENST00000431737 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
LINC00840-201ENST00000431737 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
LINC00840-201ENST00000431737 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
LINC00840-201ENST00000431737 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
LINC00840-201ENST00000431737 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
LINC00840-201ENST00000431737 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
LINC00840-201ENST00000431737 WDR63Q8IWG1 891 aa16.58■□□□□ 0.25
LINC00840-201ENST00000431737 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.25
LINC00840-201ENST00000431737 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
LINC00840-201ENST00000431737 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
LINC00840-201ENST00000431737 CHD2O14647 1828 aaKnown RBP16.57■□□□□ 0.24
LINC00840-201ENST00000431737 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
LINC00840-201ENST00000431737 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
LINC00840-201ENST00000431737 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
LINC00840-201ENST00000431737 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
LINC00840-201ENST00000431737 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00840-201ENST00000431737 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
LINC00840-201ENST00000431737 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
LINC00840-201ENST00000431737 USP54Q70EL1 1684 aa16.55■□□□□ 0.24
LINC00840-201ENST00000431737 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
LINC00840-201ENST00000431737 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
LINC00840-201ENST00000431737 SLC26A8Q96RN1 970 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 POLKQ9UBT6 870 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 OVOS2A0A0J9YW53 1432 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 USP6P35125 1406 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 OVOS2Q6IE36 1432 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 ANKARQ7Z5J8 1434 aa16.54■□□□□ 0.24
LINC00840-201ENST00000431737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00840-201ENST00000431737 RGPD8O14715 1765 aaPredicted RBP16.53■□□□□ 0.24
LINC00840-201ENST00000431737 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
LINC00840-201ENST00000431737 PLIN1O60240 522 aa16.51■□□□□ 0.23
LINC00840-201ENST00000431737 NME9Q86XW9 330 aa16.51■□□□□ 0.23
LINC00840-201ENST00000431737 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
LINC00840-201ENST00000431737 CRBNQ96SW2 442 aa16.5■□□□□ 0.23
LINC00840-201ENST00000431737 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
LINC00840-201ENST00000431737 FCHSD2O94868 740 aa16.49■□□□□ 0.23
LINC00840-201ENST00000431737 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
LINC00840-201ENST00000431737 IL16Q14005 1332 aa16.49■□□□□ 0.23
LINC00840-201ENST00000431737 COG3Q96JB2 828 aa16.49■□□□□ 0.23
LINC00840-201ENST00000431737 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
LINC00840-201ENST00000431737 U2SURPO15042 1029 aaKnown RBP16.48■□□□□ 0.23
LINC00840-201ENST00000431737 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
LINC00840-201ENST00000431737 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
LINC00840-201ENST00000431737 ACEP12821 1306 aa16.48■□□□□ 0.23
LINC00840-201ENST00000431737 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
LINC00840-201ENST00000431737 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
LINC00840-201ENST00000431737 C20orf194Q5TEA3 1177 aa16.47■□□□□ 0.23
LINC00840-201ENST00000431737 MYH16Q9H6N6 1097 aa16.47■□□□□ 0.23
LINC00840-201ENST00000431737 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
LINC00840-201ENST00000431737 PIK3C2AO00443 1686 aa16.47■□□□□ 0.23
LINC00840-201ENST00000431737 PEAK1Q9H792 1746 aa16.47■□□□□ 0.23
LINC00840-201ENST00000431737 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
LINC00840-201ENST00000431737 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.23
LINC00840-201ENST00000431737 MARF1Q9Y4F3 1742 aaKnown RBP16.46■□□□□ 0.23
LINC00840-201ENST00000431737 IL13P35225 146 aa16.46■□□□□ 0.22
LINC00840-201ENST00000431737 NEUROD2Q15784 382 aa16.46■□□□□ 0.22
LINC00840-201ENST00000431737 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.22
LINC00840-201ENST00000431737 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
LINC00840-201ENST00000431737 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
LINC00840-201ENST00000431737 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
LINC00840-201ENST00000431737 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
LINC00840-201ENST00000431737 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
LINC00840-201ENST00000431737 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
LINC00840-201ENST00000431737 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
LINC00840-201ENST00000431737 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
LINC00840-201ENST00000431737 BCAR3O75815 825 aa16.42■□□□□ 0.22
LINC00840-201ENST00000431737 KCNA6P17658 529 aa16.42■□□□□ 0.22
LINC00840-201ENST00000431737 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
LINC00840-201ENST00000431737 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
LINC00840-201ENST00000431737 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
LINC00840-201ENST00000431737 FBLN1P23142 703 aa16.4■□□□□ 0.22
LINC00840-201ENST00000431737 PRKAR2BP31323 418 aa16.4■□□□□ 0.22
LINC00840-201ENST00000431737 NPHP4O75161 1426 aaPredicted RBP16.39■□□□□ 0.21
LINC00840-201ENST00000431737 ADGRL3Q9HAR2 1447 aa16.39■□□□□ 0.21
LINC00840-201ENST00000431737 RIPK4P57078 832 aa16.38■□□□□ 0.21
LINC00840-201ENST00000431737 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
LINC00840-201ENST00000431737 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
LINC00840-201ENST00000431737 AAMPQ13685 434 aa16.38■□□□□ 0.21
LINC00840-201ENST00000431737 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
LINC00840-201ENST00000431737 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
LINC00840-201ENST00000431737 NEFMP07197 916 aa16.37■□□□□ 0.21
LINC00840-201ENST00000431737 CENPQQ7L2Z9 268 aaPredicted RBP16.37■□□□□ 0.21
LINC00840-201ENST00000431737 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
LINC00840-201ENST00000431737 MS4A1P11836 297 aa16.35■□□□□ 0.21
LINC00840-201ENST00000431737 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
LINC00840-201ENST00000431737 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
LINC00840-201ENST00000431737 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
LINC00840-201ENST00000431737 PHACTR3Q96KR7 559 aa16.34■□□□□ 0.21
LINC00840-201ENST00000431737 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
LINC00840-201ENST00000431737 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms