RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
NF1-204ENST00000431387 L1TD1Q5T7N2 865 aaKnown RBP17.26■□□□□ 0.35
NF1-204ENST00000431387 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
NF1-204ENST00000431387 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
NF1-204ENST00000431387 PDZRN3Q9UPQ7 1066 aa17.26■□□□□ 0.35
NF1-204ENST00000431387 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
NF1-204ENST00000431387 YEATS2Q9ULM3 1422 aa17.24■□□□□ 0.35
NF1-204ENST00000431387 PRAM1Q96QH2 718 aa17.24■□□□□ 0.35
NF1-204ENST00000431387 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
NF1-204ENST00000431387 PTPRMP28827 1452 aa17.24■□□□□ 0.35
NF1-204ENST00000431387 FYB1O15117 783 aa17.23■□□□□ 0.35
NF1-204ENST00000431387 TMPOP42166 694 aaKnown RBP17.23■□□□□ 0.35
NF1-204ENST00000431387 ZKSCAN2Q63HK3 967 aa17.23■□□□□ 0.35
NF1-204ENST00000431387 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
NF1-204ENST00000431387 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
NF1-204ENST00000431387 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
NF1-204ENST00000431387 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
NF1-204ENST00000431387 NLRP1Q9C000 1473 aa17.22■□□□□ 0.35
NF1-204ENST00000431387 GOLGA6L3A6NEY3 463 aa17.22■□□□□ 0.35
NF1-204ENST00000431387 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
NF1-204ENST00000431387 MYO5BQ9ULV0 1848 aa17.22■□□□□ 0.35
NF1-204ENST00000431387 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
NF1-204ENST00000431387 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
NF1-204ENST00000431387 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
NF1-204ENST00000431387 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
NF1-204ENST00000431387 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
NF1-204ENST00000431387 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
NF1-204ENST00000431387 RICTORQ6R327 1708 aa17.21■□□□□ 0.34
NF1-204ENST00000431387 TMEM131LA2VDJ0 1609 aa17.2■□□□□ 0.34
NF1-204ENST00000431387 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
NF1-204ENST00000431387 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
NF1-204ENST00000431387 YTHDC2Q9H6S0 1430 aaKnown RBP17.2■□□□□ 0.34
NF1-204ENST00000431387 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
NF1-204ENST00000431387 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
NF1-204ENST00000431387 UPF2Q9HAU5 1272 aaKnown RBP17.19■□□□□ 0.34
NF1-204ENST00000431387 TRIM27P14373 513 aa17.18■□□□□ 0.34
NF1-204ENST00000431387 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
NF1-204ENST00000431387 PKNOX2Q96KN3 472 aa17.18■□□□□ 0.34
NF1-204ENST00000431387 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
NF1-204ENST00000431387 MCM4P33991 863 aa17.18■□□□□ 0.34
NF1-204ENST00000431387 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
NF1-204ENST00000431387 RIPK4P57078 832 aa17.17■□□□□ 0.34
NF1-204ENST00000431387 CDK19Q9BWU1 502 aa17.17■□□□□ 0.34
NF1-204ENST00000431387 MED14O60244 1454 aa17.17■□□□□ 0.34
NF1-204ENST00000431387 FSD2A1L4K1 749 aa17.16■□□□□ 0.34
NF1-204ENST00000431387 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
NF1-204ENST00000431387 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
NF1-204ENST00000431387 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
NF1-204ENST00000431387 CLTCQ00610 1675 aaKnown RBP17.15■□□□□ 0.34
NF1-204ENST00000431387 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
NF1-204ENST00000431387 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
NF1-204ENST00000431387 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
NF1-204ENST00000431387 NOB1Q9ULX3 412 aaKnown RBP17.15■□□□□ 0.34
NF1-204ENST00000431387 IL16Q14005 1332 aa17.15■□□□□ 0.34
NF1-204ENST00000431387 TRAK2O60296 914 aa17.14■□□□□ 0.33
NF1-204ENST00000431387 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
NF1-204ENST00000431387 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
NF1-204ENST00000431387 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
NF1-204ENST00000431387 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
NF1-204ENST00000431387 CLCN1P35523 988 aa17.13■□□□□ 0.33
NF1-204ENST00000431387 ARHGEF40Q8TER5 1519 aa17.13■□□□□ 0.33
NF1-204ENST00000431387 FBLN1P23142 703 aa17.12■□□□□ 0.33
NF1-204ENST00000431387 HSP90AA2PQ14568 343 aaPredicted RBP17.12■□□□□ 0.33
NF1-204ENST00000431387 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
NF1-204ENST00000431387 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
NF1-204ENST00000431387 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
NF1-204ENST00000431387 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
NF1-204ENST00000431387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■□□□□ 9
NF1-204ENST00000431387 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
NF1-204ENST00000431387 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
NF1-204ENST00000431387 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
NF1-204ENST00000431387 FCHSD2O94868 740 aa17.09■□□□□ 0.33
NF1-204ENST00000431387 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
NF1-204ENST00000431387 PRKAR2BP31323 418 aa17.08■□□□□ 0.33
NF1-204ENST00000431387 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.32
NF1-204ENST00000431387 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
NF1-204ENST00000431387 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
NF1-204ENST00000431387 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
NF1-204ENST00000431387 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
NF1-204ENST00000431387 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
NF1-204ENST00000431387 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
NF1-204ENST00000431387 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
NF1-204ENST00000431387 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
NF1-204ENST00000431387 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
NF1-204ENST00000431387 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
NF1-204ENST00000431387 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
NF1-204ENST00000431387 HMOX1P09601 288 aa17.05■□□□□ 0.32
NF1-204ENST00000431387 MRE11P49959 708 aa17.05■□□□□ 0.32
NF1-204ENST00000431387 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
NF1-204ENST00000431387 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
NF1-204ENST00000431387 ESPNB1AK53 854 aa17.04■□□□□ 0.32
NF1-204ENST00000431387 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
NF1-204ENST00000431387 GAS2L3Q86XJ1 694 aa17.03■□□□□ 0.32
NF1-204ENST00000431387 ATP7BP35670 1465 aa17.02■□□□□ 0.32
NF1-204ENST00000431387 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
NF1-204ENST00000431387 A2ML1A8K2U0 1454 aa17.02■□□□□ 0.32
NF1-204ENST00000431387 NFE2L2Q16236 605 aa17.02■□□□□ 0.31
NF1-204ENST00000431387 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
NF1-204ENST00000431387 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
NF1-204ENST00000431387 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms