RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 NLRP1Q9C000 1473 aa19.36■□□□□ 0.69
PSMD1-204ENST00000431051 COL3A1P02461 1466 aaPredicted RBP19.35■□□□□ 0.69
PSMD1-204ENST00000431051 ADGRB2O60241 1585 aa19.35■□□□□ 0.69
PSMD1-204ENST00000431051 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
PSMD1-204ENST00000431051 ARHGEF40Q8TER5 1519 aa19.34■□□□□ 0.69
PSMD1-204ENST00000431051 RIPK4P57078 832 aa19.34■□□□□ 0.69
PSMD1-204ENST00000431051 FTSJ3Q8IY81 847 aaKnown RBP19.33■□□□□ 0.69
PSMD1-204ENST00000431051 SMC4Q9NTJ3 1288 aa19.33■□□□□ 0.69
PSMD1-204ENST00000431051 PMFBP1Q8TBY8 1022 aa19.32■□□□□ 0.68
PSMD1-204ENST00000431051 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
PSMD1-204ENST00000431051 SEC24BO95487 1268 aa19.31■□□□□ 0.68
PSMD1-204ENST00000431051 DIP2BQ9P265 1576 aa19.31■□□□□ 0.68
PSMD1-204ENST00000431051 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
PSMD1-204ENST00000431051 CLTCQ00610 1675 aaKnown RBP19.31■□□□□ 0.68
PSMD1-204ENST00000431051 A2ML1A8K2U0 1454 aa19.31■□□□□ 0.68
PSMD1-204ENST00000431051 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
PSMD1-204ENST00000431051 DZIP1LQ8IYY4 767 aaKnown RBP19.3■□□□□ 0.68
PSMD1-204ENST00000431051 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
PSMD1-204ENST00000431051 RIMS2Q9UQ26 1411 aa19.3■□□□□ 0.68
PSMD1-204ENST00000431051 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
PSMD1-204ENST00000431051 MED14O60244 1454 aa19.29■□□□□ 0.68
PSMD1-204ENST00000431051 TRIM27P14373 513 aa19.28■□□□□ 0.68
PSMD1-204ENST00000431051 POLKQ9UBT6 870 aa19.28■□□□□ 0.68
PSMD1-204ENST00000431051 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
PSMD1-204ENST00000431051 HMOX1P09601 288 aa19.27■□□□□ 0.68
PSMD1-204ENST00000431051 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
PSMD1-204ENST00000431051 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
PSMD1-204ENST00000431051 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
PSMD1-204ENST00000431051 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.67
PSMD1-204ENST00000431051 RIMBP3CA6NJZ7 1639 aa19.27■□□□□ 0.67
PSMD1-204ENST00000431051 RIMBP3BA6NNM3 1639 aa19.27■□□□□ 0.67
PSMD1-204ENST00000431051 RIMBP3Q9UFD9 1639 aa19.27■□□□□ 0.67
PSMD1-204ENST00000431051 NCKAP5LQ9HCH0 1330 aa19.27■□□□□ 0.67
PSMD1-204ENST00000431051 AAMPQ13685 434 aa19.26■□□□□ 0.67
PSMD1-204ENST00000431051 USP19O94966 1318 aa19.26■□□□□ 0.67
PSMD1-204ENST00000431051 ITPRIPQ8IWB1 547 aa19.26■□□□□ 0.67
PSMD1-204ENST00000431051 NOB1Q9ULX3 412 aaKnown RBP19.26■□□□□ 0.67
PSMD1-204ENST00000431051 ZRANB1Q9UGI0 708 aa19.25■□□□□ 0.67
PSMD1-204ENST00000431051 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
PSMD1-204ENST00000431051 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
PSMD1-204ENST00000431051 EMILIN1Q9Y6C2 1016 aa19.25■□□□□ 0.67
PSMD1-204ENST00000431051 NME9Q86XW9 330 aa19.24■□□□□ 0.67
PSMD1-204ENST00000431051 METP08581 1390 aa19.24■□□□□ 0.67
PSMD1-204ENST00000431051 USP35Q9P2H5 1018 aa19.24■□□□□ 0.67
PSMD1-204ENST00000431051 FCHSD2O94868 740 aa19.23■□□□□ 0.67
PSMD1-204ENST00000431051 ATF7IPQ6VMQ6 1270 aa19.23■□□□□ 0.67
PSMD1-204ENST00000431051 PHACTR3Q96KR7 559 aa19.23■□□□□ 0.67
PSMD1-204ENST00000431051 THUMPD2Q9BTF0 503 aaKnown RBP19.23■□□□□ 0.67
PSMD1-204ENST00000431051 AGLP35573 1532 aa19.23■□□□□ 0.67
PSMD1-204ENST00000431051 KIF20BQ96Q89 1820 aa19.23■□□□□ 0.67
PSMD1-204ENST00000431051 RSPH6AQ9H0K4 717 aa19.23■□□□□ 0.67
PSMD1-204ENST00000431051 WASLO00401 505 aaPredicted RBP19.22■□□□□ 0.67
PSMD1-204ENST00000431051 PNNQ9H307 717 aaKnown RBP19.22■□□□□ 0.67
PSMD1-204ENST00000431051 ESF1Q9H501 851 aaKnown RBP19.22■□□□□ 0.67
PSMD1-204ENST00000431051 IL16Q14005 1332 aa19.22■□□□□ 0.67
PSMD1-204ENST00000431051 SPATA31D1Q6ZQQ2 1576 aa19.22■□□□□ 0.67
PSMD1-204ENST00000431051 NFKBIBQ15653 356 aa19.22■□□□□ 0.67
PSMD1-204ENST00000431051 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
PSMD1-204ENST00000431051 PPIP5K1Q6PFW1 1433 aa19.21■□□□□ 0.67
PSMD1-204ENST00000431051 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
PSMD1-204ENST00000431051 ATP7BP35670 1465 aa19.2■□□□□ 0.66
PSMD1-204ENST00000431051 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
PSMD1-204ENST00000431051 REREQ9P2R6 1566 aa19.2■□□□□ 0.66
PSMD1-204ENST00000431051 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
PSMD1-204ENST00000431051 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
PSMD1-204ENST00000431051 VIRMAQ69YN4 1812 aaKnown RBP19.18■□□□□ 0.66
PSMD1-204ENST00000431051 RRS1Q15050 365 aaKnown RBP19.18■□□□□ 0.66
PSMD1-204ENST00000431051 SETD1AO15047 1707 aaKnown RBP19.18■□□□□ 0.66
PSMD1-204ENST00000431051 ZMYM3Q14202 1370 aa19.18■□□□□ 0.66
PSMD1-204ENST00000431051 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
PSMD1-204ENST00000431051 MAP2P11137 1827 aaKnown RBP19.16■□□□□ 0.66
PSMD1-204ENST00000431051 ELL2O00472 640 aaPredicted RBP19.16■□□□□ 0.66
PSMD1-204ENST00000431051 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
PSMD1-204ENST00000431051 NFE2L2Q16236 605 aa19.15■□□□□ 0.66
PSMD1-204ENST00000431051 NRXN3Q9Y4C0 1643 aa19.15■□□□□ 0.66
PSMD1-204ENST00000431051 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
PSMD1-204ENST00000431051 KIF16BQ96L93 1317 aa19.15■□□□□ 0.66
PSMD1-204ENST00000431051 IL13P35225 146 aa19.15■□□□□ 0.66
PSMD1-204ENST00000431051 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
PSMD1-204ENST00000431051 COG3Q96JB2 828 aa19.14■□□□□ 0.65
PSMD1-204ENST00000431051 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
PSMD1-204ENST00000431051 IPO8O15397 1037 aaKnown RBP19.14■□□□□ 0.65
PSMD1-204ENST00000431051 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
PSMD1-204ENST00000431051 TSPYL6Q8N831 410 aa19.13■□□□□ 0.65
PSMD1-204ENST00000431051 UPF2Q9HAU5 1272 aaKnown RBP19.13■□□□□ 0.65
PSMD1-204ENST00000431051 HDAC1Q13547 482 aaPredicted RBP19.13■□□□□ 0.65
PSMD1-204ENST00000431051 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
PSMD1-204ENST00000431051 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
PSMD1-204ENST00000431051 FRAT2O75474 233 aaPredicted RBP19.12■□□□□ 0.65
PSMD1-204ENST00000431051 CPS1P31327 1500 aa19.12■□□□□ 0.65
PSMD1-204ENST00000431051 ALDH1L2Q3SY69 923 aa19.11■□□□□ 0.65
PSMD1-204ENST00000431051 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
PSMD1-204ENST00000431051 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
PSMD1-204ENST00000431051 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
PSMD1-204ENST00000431051 TBC1D32Q96NH3 1257 aa19.1■□□□□ 0.65
PSMD1-204ENST00000431051 VAMP4O75379 141 aa19.09■□□□□ 0.65
PSMD1-204ENST00000431051 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
PSMD1-204ENST00000431051 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
PSMD1-204ENST00000431051 BECN1Q14457 450 aa19.09■□□□□ 0.65
PSMD1-204ENST00000431051 TNRQ92752 1358 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms