RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-207ENST00000430374 HDGFL2Q7Z4V5 671 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-207ENST00000430374 LRP6O75581 1613 aa13.21□□□□□ -0.3
SMARCAL1-207ENST00000430374 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-207ENST00000430374 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-207ENST00000430374 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
SMARCAL1-207ENST00000430374 TTC21BQ7Z4L5 1316 aa13.19□□□□□ -0.3
SMARCAL1-207ENST00000430374 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
SMARCAL1-207ENST00000430374 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-207ENST00000430374 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
SMARCAL1-207ENST00000430374 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
SMARCAL1-207ENST00000430374 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
SMARCAL1-207ENST00000430374 USP19O94966 1318 aa13.17□□□□□ -0.3
SMARCAL1-207ENST00000430374 NRKQ7Z2Y5 1582 aa13.17□□□□□ -0.3
SMARCAL1-207ENST00000430374 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-207ENST00000430374 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-207ENST00000430374 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-207ENST00000430374 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
SMARCAL1-207ENST00000430374 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
SMARCAL1-207ENST00000430374 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
SMARCAL1-207ENST00000430374 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
SMARCAL1-207ENST00000430374 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
SMARCAL1-207ENST00000430374 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
SMARCAL1-207ENST00000430374 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 NLRP6P59044 892 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 MYOM1P52179 1685 aa13.14□□□□□ -0.31
SMARCAL1-207ENST00000430374 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-207ENST00000430374 NME9Q86XW9 330 aa13.13□□□□□ -0.31
SMARCAL1-207ENST00000430374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCAL1-207ENST00000430374 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
SMARCAL1-207ENST00000430374 GCP02774 474 aa13.12□□□□□ -0.31
SMARCAL1-207ENST00000430374 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-207ENST00000430374 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-207ENST00000430374 PANK3Q9H999 370 aa13.12□□□□□ -0.31
SMARCAL1-207ENST00000430374 SLIT3O75094 1523 aa13.12□□□□□ -0.31
SMARCAL1-207ENST00000430374 CPDO75976 1380 aa13.11□□□□□ -0.31
SMARCAL1-207ENST00000430374 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
SMARCAL1-207ENST00000430374 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-207ENST00000430374 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
SMARCAL1-207ENST00000430374 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
SMARCAL1-207ENST00000430374 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
SMARCAL1-207ENST00000430374 FYB1O15117 783 aa13.1□□□□□ -0.31
SMARCAL1-207ENST00000430374 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
SMARCAL1-207ENST00000430374 KCNH5Q8NCM2 988 aa13.1□□□□□ -0.31
SMARCAL1-207ENST00000430374 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
SMARCAL1-207ENST00000430374 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
SMARCAL1-207ENST00000430374 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
SMARCAL1-207ENST00000430374 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
SMARCAL1-207ENST00000430374 NGLY1Q96IV0 654 aa13.09□□□□□ -0.31
SMARCAL1-207ENST00000430374 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
SMARCAL1-207ENST00000430374 AFF2P51816 1311 aa13.09□□□□□ -0.31
SMARCAL1-207ENST00000430374 SLIT2O94813 1529 aa13.08□□□□□ -0.31
SMARCAL1-207ENST00000430374 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
SMARCAL1-207ENST00000430374 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-207ENST00000430374 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
SMARCAL1-207ENST00000430374 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.32
SMARCAL1-207ENST00000430374 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-207ENST00000430374 COG3Q96JB2 828 aa13.07□□□□□ -0.32
SMARCAL1-207ENST00000430374 PRDM11Q9NQV5 511 aa13.07□□□□□ -0.32
SMARCAL1-207ENST00000430374 BCL9LQ86UU0 1499 aa13.07□□□□□ -0.32
SMARCAL1-207ENST00000430374 NFAT5O94916 1531 aa13.07□□□□□ -0.32
SMARCAL1-207ENST00000430374 PER1O15534 1290 aaPredicted RBP13.06□□□□□ -0.32
SMARCAL1-207ENST00000430374 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-207ENST00000430374 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
SMARCAL1-207ENST00000430374 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
SMARCAL1-207ENST00000430374 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
SMARCAL1-207ENST00000430374 MARF1Q9Y4F3 1742 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-207ENST00000430374 UNC5CLQ8IV45 518 aa13.05□□□□□ -0.32
SMARCAL1-207ENST00000430374 USP21Q9UK80 565 aa13.05□□□□□ -0.32
SMARCAL1-207ENST00000430374 NSD2O96028 1365 aa13.05□□□□□ -0.32
SMARCAL1-207ENST00000430374 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
SMARCAL1-207ENST00000430374 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
SMARCAL1-207ENST00000430374 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
SMARCAL1-207ENST00000430374 POTEAQ6S8J7 498 aa13.03□□□□□ -0.32
SMARCAL1-207ENST00000430374 BTG4Q9NY30 223 aa13.03□□□□□ -0.32
SMARCAL1-207ENST00000430374 ATRNO75882 1429 aa13.03□□□□□ -0.32
SMARCAL1-207ENST00000430374 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-207ENST00000430374 SOX12O15370 315 aa13.02□□□□□ -0.33
SMARCAL1-207ENST00000430374 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
SMARCAL1-207ENST00000430374 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
SMARCAL1-207ENST00000430374 ABCC6O95255 1503 aa13.02□□□□□ -0.33
SMARCAL1-207ENST00000430374 VPS72Q15906 364 aa13.01□□□□□ -0.33
SMARCAL1-207ENST00000430374 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-207ENST00000430374 LMO7Q8WWI1 1683 aa13□□□□□ -0.33
SMARCAL1-207ENST00000430374 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
SMARCAL1-207ENST00000430374 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
SMARCAL1-207ENST00000430374 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
SMARCAL1-207ENST00000430374 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
SMARCAL1-207ENST00000430374 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
SMARCAL1-207ENST00000430374 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
SMARCAL1-207ENST00000430374 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
SMARCAL1-207ENST00000430374 FBLN1P23142 703 aa12.98□□□□□ -0.33
SMARCAL1-207ENST00000430374 RBM6P78332 1123 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-207ENST00000430374 IP6K1Q92551 441 aa12.98□□□□□ -0.33
SMARCAL1-207ENST00000430374 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-207ENST00000430374 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms