RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 PSME1Q06323 249 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 CGNL1Q0VF96 1302 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 NHSL1Q5SYE7 1610 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 NRKQ7Z2Y5 1582 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 TTC21AQ8NDW8 1320 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
COL6A4P2-201ENST00000430317 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
COL6A4P2-201ENST00000430317 NSD3Q9BZ95 1437 aa12.23□□□□□ -0.45
COL6A4P2-201ENST00000430317 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
COL6A4P2-201ENST00000430317 PMFBP1Q8TBY8 1022 aa12.23□□□□□ -0.45
COL6A4P2-201ENST00000430317 ORAI2Q96SN7 254 aa12.23□□□□□ -0.45
COL6A4P2-201ENST00000430317 PANK3Q9H999 370 aa12.23□□□□□ -0.45
COL6A4P2-201ENST00000430317 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
COL6A4P2-201ENST00000430317 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
COL6A4P2-201ENST00000430317 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
COL6A4P2-201ENST00000430317 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
COL6A4P2-201ENST00000430317 FOXO3O43524 673 aa12.2□□□□□ -0.46
COL6A4P2-201ENST00000430317 PXDNQ92626 1479 aa12.2□□□□□ -0.46
COL6A4P2-201ENST00000430317 SSH2Q76I76 1423 aa12.2□□□□□ -0.46
COL6A4P2-201ENST00000430317 ARHGEF10O15013 1369 aa12.19□□□□□ -0.46
COL6A4P2-201ENST00000430317 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
COL6A4P2-201ENST00000430317 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
COL6A4P2-201ENST00000430317 TNS3Q68CZ2 1445 aa12.19□□□□□ -0.46
COL6A4P2-201ENST00000430317 SOS2Q07890 1332 aaPredicted RBP12.18□□□□□ -0.46
COL6A4P2-201ENST00000430317 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
COL6A4P2-201ENST00000430317 KRT28Q7Z3Y7 464 aa12.18□□□□□ -0.46
COL6A4P2-201ENST00000430317 USP54Q70EL1 1684 aa12.18□□□□□ -0.46
COL6A4P2-201ENST00000430317 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
COL6A4P2-201ENST00000430317 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
COL6A4P2-201ENST00000430317 ALS2Q96Q42 1657 aa12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 MED1Q15648 1581 aaPredicted RBP12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
COL6A4P2-201ENST00000430317 ANP32CO43423 234 aa12.15□□□□□ -0.46
COL6A4P2-201ENST00000430317 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
COL6A4P2-201ENST00000430317 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
COL6A4P2-201ENST00000430317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
COL6A4P2-201ENST00000430317 LRRC59Q96AG4 307 aaKnown RBP12.15□□□□□ -0.46
COL6A4P2-201ENST00000430317 COG3Q96JB2 828 aa12.15□□□□□ -0.46
COL6A4P2-201ENST00000430317 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.47
COL6A4P2-201ENST00000430317 SPATA31A3Q5VYP0 1347 aa12.14□□□□□ -0.47
COL6A4P2-201ENST00000430317 OVOS2A0A0J9YW53 1432 aa12.14□□□□□ -0.47
COL6A4P2-201ENST00000430317 OVOS2Q6IE36 1432 aa12.14□□□□□ -0.47
COL6A4P2-201ENST00000430317 RALBP1Q15311 655 aa12.14□□□□□ -0.47
COL6A4P2-201ENST00000430317 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
COL6A4P2-201ENST00000430317 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
COL6A4P2-201ENST00000430317 FYB1O15117 783 aa12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 NLRP6P59044 892 aa12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
COL6A4P2-201ENST00000430317 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
COL6A4P2-201ENST00000430317 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
COL6A4P2-201ENST00000430317 NME9Q86XW9 330 aa12.11□□□□□ -0.47
COL6A4P2-201ENST00000430317 SLIT3O75094 1523 aa12.11□□□□□ -0.47
COL6A4P2-201ENST00000430317 USP19O94966 1318 aa12.11□□□□□ -0.47
COL6A4P2-201ENST00000430317 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
COL6A4P2-201ENST00000430317 AATKQ6ZMQ8 1374 aa12.1□□□□□ -0.47
COL6A4P2-201ENST00000430317 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
COL6A4P2-201ENST00000430317 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
COL6A4P2-201ENST00000430317 JCADQ9P266 1359 aa12.09□□□□□ -0.47
COL6A4P2-201ENST00000430317 PHRF1Q9P1Y6 1649 aaKnown RBP12.09□□□□□ -0.47
COL6A4P2-201ENST00000430317 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
COL6A4P2-201ENST00000430317 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
COL6A4P2-201ENST00000430317 PRKRIP1Q9H875 184 aaPredicted RBP12.09□□□□□ -0.47
COL6A4P2-201ENST00000430317 ABCC6O95255 1503 aa12.09□□□□□ -0.47
COL6A4P2-201ENST00000430317 KIF24Q5T7B8 1368 aa12.08□□□□□ -0.48
COL6A4P2-201ENST00000430317 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
COL6A4P2-201ENST00000430317 HAP1P54257 671 aaPredicted RBP12.08□□□□□ -0.48
COL6A4P2-201ENST00000430317 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
COL6A4P2-201ENST00000430317 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.48
COL6A4P2-201ENST00000430317 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
COL6A4P2-201ENST00000430317 ABCA3Q99758 1704 aa12.07□□□□□ -0.48
COL6A4P2-201ENST00000430317 RTL1A6NKG5 1358 aa12.06□□□□□ -0.48
COL6A4P2-201ENST00000430317 SMG6Q86US8 1419 aaKnown RBP12.06□□□□□ -0.48
COL6A4P2-201ENST00000430317 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
COL6A4P2-201ENST00000430317 NFAT5O94916 1531 aa12.06□□□□□ -0.48
COL6A4P2-201ENST00000430317 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
COL6A4P2-201ENST00000430317 CPDO75976 1380 aa12.05□□□□□ -0.48
COL6A4P2-201ENST00000430317 GCP02774 474 aa12.04□□□□□ -0.48
COL6A4P2-201ENST00000430317 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
COL6A4P2-201ENST00000430317 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
COL6A4P2-201ENST00000430317 FLT4P35916 1363 aa12.04□□□□□ -0.48
COL6A4P2-201ENST00000430317 HSPA1LP34931 641 aa12.03□□□□□ -0.48
COL6A4P2-201ENST00000430317 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
COL6A4P2-201ENST00000430317 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
COL6A4P2-201ENST00000430317 LTN1O94822 1766 aa12.02□□□□□ -0.48
COL6A4P2-201ENST00000430317 PPP2R1AP30153 589 aa12.02□□□□□ -0.49
COL6A4P2-201ENST00000430317 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
COL6A4P2-201ENST00000430317 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
COL6A4P2-201ENST00000430317 TNNT2P45379 298 aaPredicted RBP12.01□□□□□ -0.49
COL6A4P2-201ENST00000430317 COL14A1Q05707 1796 aaKnown RBP12□□□□□ -0.49
COL6A4P2-201ENST00000430317 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms