RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
SNRNP200-202ENST00000429650 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
SNRNP200-202ENST00000429650 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 FYB1O15117 783 aa17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 TERF2IPQ9NYB0 399 aa17.03■□□□□ 0.32
SNRNP200-202ENST00000429650 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
SNRNP200-202ENST00000429650 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.32
SNRNP200-202ENST00000429650 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
SNRNP200-202ENST00000429650 TRIM35Q9UPQ4 493 aa17.01■□□□□ 0.31
SNRNP200-202ENST00000429650 DZIP1LQ8IYY4 767 aaKnown RBP17■□□□□ 0.31
SNRNP200-202ENST00000429650 POGKQ9P215 609 aa17■□□□□ 0.31
SNRNP200-202ENST00000429650 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
SNRNP200-202ENST00000429650 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
SNRNP200-202ENST00000429650 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
SNRNP200-202ENST00000429650 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-202ENST00000429650 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
SNRNP200-202ENST00000429650 GSE1Q14687 1217 aa16.98■□□□□ 0.31
SNRNP200-202ENST00000429650 IL16Q14005 1332 aa16.98■□□□□ 0.31
SNRNP200-202ENST00000429650 ARHGEF40Q8TER5 1519 aa16.98■□□□□ 0.31
SNRNP200-202ENST00000429650 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
SNRNP200-202ENST00000429650 KIF20BQ96Q89 1820 aa16.97■□□□□ 0.31
SNRNP200-202ENST00000429650 PNPLA6Q8IY17 1366 aa16.97■□□□□ 0.31
SNRNP200-202ENST00000429650 TRIM27P14373 513 aa16.97■□□□□ 0.31
SNRNP200-202ENST00000429650 HDGFL2Q7Z4V5 671 aaPredicted RBP16.97■□□□□ 0.31
SNRNP200-202ENST00000429650 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
SNRNP200-202ENST00000429650 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
SNRNP200-202ENST00000429650 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
SNRNP200-202ENST00000429650 FRAT2O75474 233 aaPredicted RBP16.96■□□□□ 0.3
SNRNP200-202ENST00000429650 RIPK4P57078 832 aa16.95■□□□□ 0.3
SNRNP200-202ENST00000429650 BECN1Q14457 450 aa16.94■□□□□ 0.3
SNRNP200-202ENST00000429650 CABP1Q9NZU7 370 aa16.94■□□□□ 0.3
SNRNP200-202ENST00000429650 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
SNRNP200-202ENST00000429650 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
SNRNP200-202ENST00000429650 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
SNRNP200-202ENST00000429650 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
SNRNP200-202ENST00000429650 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
SNRNP200-202ENST00000429650 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
SNRNP200-202ENST00000429650 PDIA4P13667 645 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-202ENST00000429650 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
SNRNP200-202ENST00000429650 ITPRIPQ8IWB1 547 aa16.92■□□□□ 0.3
SNRNP200-202ENST00000429650 HOMEZQ8IX15 550 aa16.92■□□□□ 0.3
SNRNP200-202ENST00000429650 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-202ENST00000429650 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
SNRNP200-202ENST00000429650 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
SNRNP200-202ENST00000429650 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
SNRNP200-202ENST00000429650 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
SNRNP200-202ENST00000429650 FCHSD2O94868 740 aa16.9■□□□□ 0.3
SNRNP200-202ENST00000429650 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-202ENST00000429650 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
SNRNP200-202ENST00000429650 ATP7BP35670 1465 aa16.89■□□□□ 0.29
SNRNP200-202ENST00000429650 TMEM57Q8N5G2 664 aa16.89■□□□□ 0.29
SNRNP200-202ENST00000429650 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
SNRNP200-202ENST00000429650 SETD1AO15047 1707 aaKnown RBP16.88■□□□□ 0.29
SNRNP200-202ENST00000429650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNRNP200-202ENST00000429650 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
SNRNP200-202ENST00000429650 POLKQ9UBT6 870 aa16.88■□□□□ 0.29
SNRNP200-202ENST00000429650 A2ML1A8K2U0 1454 aa16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 ALDH1L2Q3SY69 923 aa16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 WAPLQ7Z5K2 1190 aa16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 MAP2P11137 1827 aaKnown RBP16.87■□□□□ 0.29
SNRNP200-202ENST00000429650 IPO8O15397 1037 aaKnown RBP16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 FBLN1P23142 703 aa16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 REREQ9P2R6 1566 aa16.86■□□□□ 0.29
SNRNP200-202ENST00000429650 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
SNRNP200-202ENST00000429650 ANTXR1Q9H6X2 564 aa16.85■□□□□ 0.29
SNRNP200-202ENST00000429650 RIMS2Q9UQ26 1411 aa16.85■□□□□ 0.29
SNRNP200-202ENST00000429650 AGLP35573 1532 aa16.85■□□□□ 0.29
SNRNP200-202ENST00000429650 PPIP5K1Q6PFW1 1433 aa16.84■□□□□ 0.29
SNRNP200-202ENST00000429650 SPATA31D1Q6ZQQ2 1576 aa16.84■□□□□ 0.29
SNRNP200-202ENST00000429650 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
SNRNP200-202ENST00000429650 BRPF1P55201 1214 aaPredicted RBP16.83■□□□□ 0.28
SNRNP200-202ENST00000429650 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
SNRNP200-202ENST00000429650 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
SNRNP200-202ENST00000429650 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
SNRNP200-202ENST00000429650 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
SNRNP200-202ENST00000429650 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
SNRNP200-202ENST00000429650 HMOX1P09601 288 aa16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 EDC4Q6P2E9 1401 aaKnown RBP16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
SNRNP200-202ENST00000429650 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
SNRNP200-202ENST00000429650 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms