RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
MBD4-203ENST00000429544 ROBO2Q9HCK4 1378 aa21.11■□□□□ 0.97
MBD4-203ENST00000429544 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
MBD4-203ENST00000429544 MON2Q7Z3U7 1717 aa21.11■□□□□ 0.97
MBD4-203ENST00000429544 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
MBD4-203ENST00000429544 NCKAP5LQ9HCH0 1330 aa21.11■□□□□ 0.97
MBD4-203ENST00000429544 AKAP12Q02952 1782 aa21.1■□□□□ 0.97
MBD4-203ENST00000429544 DIAPH1O60610 1272 aaKnown RBP21.1■□□□□ 0.97
MBD4-203ENST00000429544 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
MBD4-203ENST00000429544 PNPLA6Q8IY17 1366 aa21.09■□□□□ 0.97
MBD4-203ENST00000429544 MSH5O43196 834 aa21.09■□□□□ 0.97
MBD4-203ENST00000429544 FBLN1P23142 703 aa21.09■□□□□ 0.97
MBD4-203ENST00000429544 NCBP3Q53F19 620 aaKnown RBP21.09■□□□□ 0.97
MBD4-203ENST00000429544 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.08■□□□□ 0.97
MBD4-203ENST00000429544 MAPK8IP3Q9UPT6 1336 aa21.08■□□□□ 0.96
MBD4-203ENST00000429544 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
MBD4-203ENST00000429544 NME9Q86XW9 330 aa21.07■□□□□ 0.96
MBD4-203ENST00000429544 CCDC61Q9Y6R9 512 aa21.07■□□□□ 0.96
MBD4-203ENST00000429544 PPM1GO15355 546 aaPredicted RBP21.06■□□□□ 0.96
MBD4-203ENST00000429544 POLKQ9UBT6 870 aa21.06■□□□□ 0.96
MBD4-203ENST00000429544 PRR36Q9H6K5 1346 aa21.06■□□□□ 0.96
MBD4-203ENST00000429544 TMPOP42166 694 aaKnown RBP21.05■□□□□ 0.96
MBD4-203ENST00000429544 TRHP20396 242 aaPredicted RBP21.05■□□□□ 0.96
MBD4-203ENST00000429544 CANXP27824 592 aaKnown RBP21.05■□□□□ 0.96
MBD4-203ENST00000429544 ZRANB1Q9UGI0 708 aa21.05■□□□□ 0.96
MBD4-203ENST00000429544 EID1Q9Y6B2 187 aa21.05■□□□□ 0.96
MBD4-203ENST00000429544 KDM2BQ8NHM5 1336 aa21.05■□□□□ 0.96
MBD4-203ENST00000429544 SLIT1O75093 1534 aa21.04■□□□□ 0.96
MBD4-203ENST00000429544 SLC26A8Q96RN1 970 aa21.04■□□□□ 0.96
MBD4-203ENST00000429544 MYH16Q9H6N6 1097 aa21.04■□□□□ 0.96
MBD4-203ENST00000429544 LRRC7Q96NW7 1537 aa21.04■□□□□ 0.96
MBD4-203ENST00000429544 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
MBD4-203ENST00000429544 RARSP54136 660 aaKnown RBP21.03■□□□□ 0.96
MBD4-203ENST00000429544 ARHGAP23Q9P227 1491 aa21.03■□□□□ 0.96
MBD4-203ENST00000429544 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
MBD4-203ENST00000429544 TOPAZ1Q8N9V7 1692 aa21.03■□□□□ 0.96
MBD4-203ENST00000429544 CENPQQ7L2Z9 268 aaPredicted RBP21.01■□□□□ 0.95
MBD4-203ENST00000429544 TRIM35Q9UPQ4 493 aa21.01■□□□□ 0.95
MBD4-203ENST00000429544 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
MBD4-203ENST00000429544 PDE3AQ14432 1141 aa21.01■□□□□ 0.95
MBD4-203ENST00000429544 FRAT1Q92837 279 aaPredicted RBP21■□□□□ 0.95
MBD4-203ENST00000429544 ANP32EQ9BTT0 268 aa21■□□□□ 0.95
MBD4-203ENST00000429544 PNNQ9H307 717 aaKnown RBP21■□□□□ 0.95
MBD4-203ENST00000429544 PANK1Q8TE04 598 aa20.99■□□□□ 0.95
MBD4-203ENST00000429544 COG3Q96JB2 828 aa20.99■□□□□ 0.95
MBD4-203ENST00000429544 MS4A1P11836 297 aa20.99■□□□□ 0.95
MBD4-203ENST00000429544 TSR2Q969E8 191 aaKnown RBP20.99■□□□□ 0.95
MBD4-203ENST00000429544 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
MBD4-203ENST00000429544 RIPK4P57078 832 aa20.98■□□□□ 0.95
MBD4-203ENST00000429544 BCL2L13Q9BXK5 485 aa20.98■□□□□ 0.95
MBD4-203ENST00000429544 NRKQ7Z2Y5 1582 aa20.98■□□□□ 0.95
MBD4-203ENST00000429544 NUTM2FA1L443 756 aa20.98■□□□□ 0.95
MBD4-203ENST00000429544 FCHSD2O94868 740 aa20.98■□□□□ 0.95
MBD4-203ENST00000429544 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
MBD4-203ENST00000429544 RSPH6AQ9H0K4 717 aa20.97■□□□□ 0.95
MBD4-203ENST00000429544 AATKQ6ZMQ8 1374 aa20.97■□□□□ 0.95
MBD4-203ENST00000429544 PRKAR2BP31323 418 aa20.97■□□□□ 0.95
MBD4-203ENST00000429544 COG6Q9Y2V7 657 aa20.97■□□□□ 0.95
MBD4-203ENST00000429544 AMOTL2Q9Y2J4 779 aa20.96■□□□□ 0.95
MBD4-203ENST00000429544 PDE4AP27815 886 aa20.95■□□□□ 0.94
MBD4-203ENST00000429544 THEMISQ8N1K5 641 aaPredicted RBP20.95■□□□□ 0.94
MBD4-203ENST00000429544 DIP2AQ14689 1571 aa20.94■□□□□ 0.94
MBD4-203ENST00000429544 HMOX1P09601 288 aa20.94■□□□□ 0.94
MBD4-203ENST00000429544 RRS1Q15050 365 aaKnown RBP20.94■□□□□ 0.94
MBD4-203ENST00000429544 TBX22Q9Y458 520 aa20.94■□□□□ 0.94
MBD4-203ENST00000429544 ACEP12821 1306 aa20.94■□□□□ 0.94
MBD4-203ENST00000429544 TNNQ9UQP3 1299 aa20.94■□□□□ 0.94
MBD4-203ENST00000429544 IL16Q14005 1332 aa20.93■□□□□ 0.94
MBD4-203ENST00000429544 IL13P35225 146 aa20.93■□□□□ 0.94
MBD4-203ENST00000429544 EXOSC9Q06265 439 aaKnown RBP20.93■□□□□ 0.94
MBD4-203ENST00000429544 NEFMP07197 916 aa20.93■□□□□ 0.94
MBD4-203ENST00000429544 TTC21BQ7Z4L5 1316 aa20.92■□□□□ 0.94
MBD4-203ENST00000429544 PTCH1Q13635 1447 aa20.92■□□□□ 0.94
MBD4-203ENST00000429544 ANP32AP39687 249 aaKnown RBP20.92■□□□□ 0.94
MBD4-203ENST00000429544 BACH2Q9BYV9 841 aa20.92■□□□□ 0.94
MBD4-203ENST00000429544 RIMS1Q86UR5 1692 aaKnown RBP20.91■□□□□ 0.94
MBD4-203ENST00000429544 PLEKHG3A1L390 1219 aa20.91■□□□□ 0.94
MBD4-203ENST00000429544 CLUAP1Q96AJ1 413 aa20.91■□□□□ 0.94
MBD4-203ENST00000429544 CT47B1P0C2W7 299 aaPredicted RBP20.9■□□□□ 0.94
MBD4-203ENST00000429544 RLBP1P12271 317 aa20.9■□□□□ 0.94
MBD4-203ENST00000429544 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
MBD4-203ENST00000429544 USP6P35125 1406 aa20.9■□□□□ 0.94
MBD4-203ENST00000429544 XRN1Q8IZH2 1706 aaKnown RBP20.9■□□□□ 0.94
MBD4-203ENST00000429544 CEP170BQ9Y4F5 1589 aaPredicted RBP20.9■□□□□ 0.94
MBD4-203ENST00000429544 RGPD8O14715 1765 aaPredicted RBP20.9■□□□□ 0.94
MBD4-203ENST00000429544 PHACTR3Q96KR7 559 aa20.89■□□□□ 0.94
MBD4-203ENST00000429544 NFE2L2Q16236 605 aa20.88■□□□□ 0.93
MBD4-203ENST00000429544 OVOS2A0A0J9YW53 1432 aa20.88■□□□□ 0.93
MBD4-203ENST00000429544 OVOS2Q6IE36 1432 aa20.88■□□□□ 0.93
MBD4-203ENST00000429544 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
MBD4-203ENST00000429544 IGHDP01880 384 aa20.87■□□□□ 0.93
MBD4-203ENST00000429544 SMC4Q9NTJ3 1288 aa20.87■□□□□ 0.93
MBD4-203ENST00000429544 DLG5Q8TDM6 1919 aa20.87■□□□□ 0.93
MBD4-203ENST00000429544 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
MBD4-203ENST00000429544 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
MBD4-203ENST00000429544 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
MBD4-203ENST00000429544 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
MBD4-203ENST00000429544 RGS3P49796 1198 aa20.83■□□□□ 0.93
MBD4-203ENST00000429544 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.93
MBD4-203ENST00000429544 PEAK1Q9H792 1746 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms