RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SLAIN2Q9P270 581 aa15.23■□□□□ 0.03
CECR3-201ENST00000428828 NSD3Q9BZ95 1437 aa15.23■□□□□ 0.03
CECR3-201ENST00000428828 CERKQ8TCT0 537 aa15.23■□□□□ 0.03
CECR3-201ENST00000428828 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CECR3-201ENST00000428828 PLEKHG3A1L390 1219 aa15.21■□□□□ 0.03
CECR3-201ENST00000428828 CPSF1Q10570 1443 aaKnown RBP15.21■□□□□ 0.03
CECR3-201ENST00000428828 IQSEC2Q5JU85 1478 aa15.21■□□□□ 0.03
CECR3-201ENST00000428828 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.02
CECR3-201ENST00000428828 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.02
CECR3-201ENST00000428828 POLR3AO14802 1390 aaPredicted RBP15.2■□□□□ 0.02
CECR3-201ENST00000428828 FOXO3O43524 673 aa15.2■□□□□ 0.02
CECR3-201ENST00000428828 NHSL1Q5SYE7 1610 aa15.2■□□□□ 0.02
CECR3-201ENST00000428828 DDX17Q92841 729 aaKnown RBP15.2■□□□□ 0.02
CECR3-201ENST00000428828 CARD14Q9BXL6 1004 aa15.2■□□□□ 0.02
CECR3-201ENST00000428828 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
CECR3-201ENST00000428828 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
CECR3-201ENST00000428828 PIP4K2BP78356 416 aa15.19■□□□□ 0.02
CECR3-201ENST00000428828 BRINP3Q76B58 766 aa15.19■□□□□ 0.02
CECR3-201ENST00000428828 TRPM3Q9HCF6 1732 aaPredicted RBP15.19■□□□□ 0.02
CECR3-201ENST00000428828 USP6P35125 1406 aa15.19■□□□□ 0.02
CECR3-201ENST00000428828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
CECR3-201ENST00000428828 KNSTRNQ9Y448 316 aa15.19■□□□□ 0.02
CECR3-201ENST00000428828 ANP32CO43423 234 aa15.18■□□□□ 0.02
CECR3-201ENST00000428828 TOM1O60784 492 aa15.17■□□□□ 0.02
CECR3-201ENST00000428828 PSME1Q06323 249 aa15.17■□□□□ 0.02
CECR3-201ENST00000428828 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
CECR3-201ENST00000428828 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
CECR3-201ENST00000428828 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
CECR3-201ENST00000428828 PHLPP1O60346 1717 aa15.17■□□□□ 0.02
CECR3-201ENST00000428828 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
CECR3-201ENST00000428828 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
CECR3-201ENST00000428828 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
CECR3-201ENST00000428828 ZNF692Q9BU19 519 aaPredicted RBP15.16■□□□□ 0.02
CECR3-201ENST00000428828 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
CECR3-201ENST00000428828 ALS2Q96Q42 1657 aa15.14■□□□□ 0.01
CECR3-201ENST00000428828 PXDNQ92626 1479 aa15.14■□□□□ 0.01
CECR3-201ENST00000428828 MARF1Q9Y4F3 1742 aaKnown RBP15.14■□□□□ 0.01
CECR3-201ENST00000428828 CGNL1Q0VF96 1302 aa15.14■□□□□ 0.01
CECR3-201ENST00000428828 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
CECR3-201ENST00000428828 TTC21BQ7Z4L5 1316 aa15.13■□□□□ 0.01
CECR3-201ENST00000428828 NME9Q86XW9 330 aa15.13■□□□□ 0.01
CECR3-201ENST00000428828 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
CECR3-201ENST00000428828 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
CECR3-201ENST00000428828 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
CECR3-201ENST00000428828 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
CECR3-201ENST00000428828 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
CECR3-201ENST00000428828 LMOD2Q6P5Q4 547 aa15.12■□□□□ 0.01
CECR3-201ENST00000428828 SSH2Q76I76 1423 aa15.12■□□□□ 0.01
CECR3-201ENST00000428828 AHDC1Q5TGY3 1603 aaPredicted RBP15.12■□□□□ 0.01
CECR3-201ENST00000428828 NBR1Q14596 966 aa15.11■□□□□ 0.01
CECR3-201ENST00000428828 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
CECR3-201ENST00000428828 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
CECR3-201ENST00000428828 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
CECR3-201ENST00000428828 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
CECR3-201ENST00000428828 FYB1O15117 783 aa15.09■□□□□ 0.01
CECR3-201ENST00000428828 TTC21AQ8NDW8 1320 aa15.09■□□□□ 0.01
CECR3-201ENST00000428828 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
CECR3-201ENST00000428828 ABTB2Q8N961 1025 aa15.09■□□□□ 0.01
CECR3-201ENST00000428828 COL16A1Q07092 1604 aaPredicted RBP15.09■□□□□ 0.01
CECR3-201ENST00000428828 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
CECR3-201ENST00000428828 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
CECR3-201ENST00000428828 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
CECR3-201ENST00000428828 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
CECR3-201ENST00000428828 NSD2O96028 1365 aa15.07■□□□□ 0
CECR3-201ENST00000428828 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
CECR3-201ENST00000428828 MORC1Q86VD1 984 aa15.07■□□□□ 0
CECR3-201ENST00000428828 LTN1O94822 1766 aa15.07■□□□□ 0
CECR3-201ENST00000428828 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
CECR3-201ENST00000428828 ABCA3Q99758 1704 aa15.06■□□□□ 0
CECR3-201ENST00000428828 CRYBG1Q9Y4K1 1723 aa15.06■□□□□ 0
CECR3-201ENST00000428828 SOX12O15370 315 aa15.06■□□□□ 0
CECR3-201ENST00000428828 NLRP6P59044 892 aa15.06■□□□□ 0
CECR3-201ENST00000428828 COG3Q96JB2 828 aa15.06■□□□□ 0
CECR3-201ENST00000428828 SBNO1A3KN83 1393 aa15.06■□□□□ 0
CECR3-201ENST00000428828 NPC1L1Q9UHC9 1359 aa15.06■□□□□ 0
CECR3-201ENST00000428828 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
CECR3-201ENST00000428828 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
CECR3-201ENST00000428828 EIF5BO60841 1220 aaKnown RBP15.05■□□□□ 0
CECR3-201ENST00000428828 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ 0
CECR3-201ENST00000428828 SPATA31A3Q5VYP0 1347 aa15.05■□□□□ -0
CECR3-201ENST00000428828 PARD3Q8TEW0 1356 aa15.05■□□□□ -0
CECR3-201ENST00000428828 PKNOX2Q96KN3 472 aa15.04■□□□□ -0
CECR3-201ENST00000428828 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
CECR3-201ENST00000428828 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
CECR3-201ENST00000428828 FBLN1P23142 703 aa15.02■□□□□ -0
CECR3-201ENST00000428828 ARHGEF10O15013 1369 aa15.02□□□□□ -0.01
CECR3-201ENST00000428828 USP31Q70CQ4 1352 aa15.02□□□□□ -0.01
CECR3-201ENST00000428828 RALBP1Q15311 655 aa15.02□□□□□ -0.01
CECR3-201ENST00000428828 NLRP13Q86W25 1043 aa15.02□□□□□ -0.01
CECR3-201ENST00000428828 CABLES1Q8TDN4 633 aa15.01□□□□□ -0.01
CECR3-201ENST00000428828 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
CECR3-201ENST00000428828 SHPRHQ149N8 1683 aa15□□□□□ -0.01
CECR3-201ENST00000428828 COL22A1Q8NFW1 1626 aaPredicted RBP15□□□□□ -0.01
CECR3-201ENST00000428828 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
CECR3-201ENST00000428828 ZBTB4Q9P1Z0 1013 aaPredicted RBP15□□□□□ -0.01
CECR3-201ENST00000428828 SLIT3O75094 1523 aa15□□□□□ -0.01
CECR3-201ENST00000428828 RGPD5Q99666 1765 aa14.99□□□□□ -0.01
CECR3-201ENST00000428828 MYBBP1AQ9BQG0 1328 aaKnown RBP14.99□□□□□ -0.01
CECR3-201ENST00000428828 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
CECR3-201ENST00000428828 PEAK1Q9H792 1746 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms