RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 SPDYE5A6NIY4 337 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 SRPK2P78362 688 aaKnown RBP4.92□□□□□ -1.62
CCDC30-203ENST00000428554 MMRN1Q13201 1228 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 SAMD7Q7Z3H4 446 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 MTMR14Q8NCE2 650 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 IRX6P78412 446 aaPredicted RBP4.91□□□□□ -1.62
CCDC30-203ENST00000428554 FAM98CQ17RN3 349 aaKnown RBP4.91□□□□□ -1.62
CCDC30-203ENST00000428554 SPNS2Q8IVW8 549 aa4.91□□□□□ -1.62
CCDC30-203ENST00000428554 CCDC181Q5TID7 509 aa4.91□□□□□ -1.62
CCDC30-203ENST00000428554 BANK1Q8NDB2 785 aa4.91□□□□□ -1.62
CCDC30-203ENST00000428554 TPD52L2O43399 206 aaKnown RBP4.91□□□□□ -1.62
CCDC30-203ENST00000428554 SF3A1Q15459 793 aaKnown RBP4.91□□□□□ -1.62
CCDC30-203ENST00000428554 ZNF330Q9Y3S2 320 aaPredicted RBP4.91□□□□□ -1.62
CCDC30-203ENST00000428554 BHMG1C9JSJ3 638 aaPredicted RBP4.9□□□□□ -1.62
CCDC30-203ENST00000428554 AP1G2O75843 785 aa4.9□□□□□ -1.62
CCDC30-203ENST00000428554 FDX1P10109 184 aa4.9□□□□□ -1.62
CCDC30-203ENST00000428554 GJA5P36382 358 aa4.9□□□□□ -1.62
CCDC30-203ENST00000428554 ZC3H6P61129 1189 aaKnown RBP4.9□□□□□ -1.62
CCDC30-203ENST00000428554 TMEM259Q4ZIN3 620 aa4.9□□□□□ -1.62
CCDC30-203ENST00000428554 PLCD4Q9BRC7 762 aa4.9□□□□□ -1.62
CCDC30-203ENST00000428554 NUTM2BA6NNL0 878 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-203ENST00000428554 NUTM2EB1AL46 878 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-203ENST00000428554 FUT2Q10981 343 aa4.9□□□□□ -1.63
CCDC30-203ENST00000428554 NUTM2DQ5VT03 806 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-203ENST00000428554 DNAJC14Q6Y2X3 702 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-203ENST00000428554 NUTM2AQ8IVF1 878 aaPredicted RBP4.9□□□□□ -1.63
CCDC30-203ENST00000428554 STAC3Q96MF2 364 aa4.9□□□□□ -1.63
CCDC30-203ENST00000428554 HRO43593 1189 aa4.89□□□□□ -1.63
CCDC30-203ENST00000428554 RNF40O75150 1001 aa4.89□□□□□ -1.63
CCDC30-203ENST00000428554 MYT1LQ9UL68 1186 aa4.89□□□□□ -1.63
CCDC30-203ENST00000428554 CFHP08603 1231 aa4.89□□□□□ -1.63
CCDC30-203ENST00000428554 ANAPC15P60006 121 aa4.89□□□□□ -1.63
CCDC30-203ENST00000428554 GDPD2Q9HCC8 539 aa4.89□□□□□ -1.63
CCDC30-203ENST00000428554 USP46P62068 366 aa4.88□□□□□ -1.63
CCDC30-203ENST00000428554 ZNF526Q8TF50 670 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 ZFRQ96KR1 1074 aaKnown RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 NBPF3Q9H094 633 aa4.88□□□□□ -1.63
CCDC30-203ENST00000428554 SLC52A1Q9NWF4 448 aa4.88□□□□□ -1.63
CCDC30-203ENST00000428554 USP17L8P0C7I0 530 aa4.88□□□□□ -1.63
CCDC30-203ENST00000428554 CSB-PGBD3P0DP91 1061 aa4.88□□□□□ -1.63
CCDC30-203ENST00000428554 SYMPKQ92797 1274 aaKnown RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 ZBTB3Q9H5J0 574 aa4.88□□□□□ -1.63
CCDC30-203ENST00000428554 METTL14Q9HCE5 456 aaKnown RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 PRPF38BQ5VTL8 546 aaKnown RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 MAGEC2Q9UBF1 373 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-203ENST00000428554 HDGFP51858 240 aaKnown RBP4.87□□□□□ -1.63
CCDC30-203ENST00000428554 CTDSPL2Q05D32 466 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 GORABQ5T7V8 394 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 NOP9Q86U38 636 aaKnown RBP4.87□□□□□ -1.63
CCDC30-203ENST00000428554 SLF2Q8IX21 1173 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 HMX1Q9NP08 348 aaPredicted RBP4.87□□□□□ -1.63
CCDC30-203ENST00000428554 TBC1D2BQ9UPU7 963 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 CFAP99D6REC4 459 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 GIMAP6Q6P9H5 292 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 LAPTM4BQ86VI4 370 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 MICAL1Q8TDZ2 1067 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 UBA5Q9GZZ9 404 aa4.87□□□□□ -1.63
CCDC30-203ENST00000428554 GRIPAP1Q4V328 841 aa4.86□□□□□ -1.63
CCDC30-203ENST00000428554 SPTY2D1Q68D10 685 aaPredicted RBP4.86□□□□□ -1.63
CCDC30-203ENST00000428554 MRPL50Q8N5N7 158 aaKnown RBP4.86□□□□□ -1.63
CCDC30-203ENST00000428554 NAP1L5Q96NT1 182 aaPredicted RBP4.86□□□□□ -1.63
CCDC30-203ENST00000428554 PUS10Q3MIT2 529 aaKnown RBP4.86□□□□□ -1.63
CCDC30-203ENST00000428554 GJD4Q96KN9 370 aaPredicted RBP4.86□□□□□ -1.63
CCDC30-203ENST00000428554 DNAJC2Q99543 621 aaKnown RBP4.86□□□□□ -1.63
CCDC30-203ENST00000428554 ABL2P42684 1182 aa4.86□□□□□ -1.63
CCDC30-203ENST00000428554 MTMR2Q13614 643 aa4.86□□□□□ -1.63
CCDC30-203ENST00000428554 TSC1Q92574 1164 aa4.86□□□□□ -1.63
CCDC30-203ENST00000428554 VRTNQ9H8Y1 702 aa4.86□□□□□ -1.63
CCDC30-203ENST00000428554 C6orf229H3BNL8 230 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 LRRN4Q8WUT4 740 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 ERCC6L2Q5T890 1561 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 POM121CA8CG34 1229 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 GPR37L1O60883 481 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 ATP6V1AP38606 617 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 SMC5Q8IY18 1101 aa4.85□□□□□ -1.63
CCDC30-203ENST00000428554 RNF166Q96A37 237 aaPredicted RBP4.85□□□□□ -1.63
CCDC30-203ENST00000428554 GOLGA8CPA6NN73 597 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 HMGB1P1B2RPK0 211 aaPredicted RBP4.84□□□□□ -1.63
CCDC30-203ENST00000428554 PTMSP20962 102 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 MCCP23508 829 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 EPS8L1Q8TE68 723 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 TRIM34Q9BYJ4 488 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 BRINP2Q9C0B6 783 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 TMEM88BA6NKF7 163 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 EIF3JO75822 258 aaKnown RBP4.84□□□□□ -1.63
CCDC30-203ENST00000428554 ZNF662Q6ZS27 426 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 MORC4Q8TE76 937 aa4.84□□□□□ -1.63
CCDC30-203ENST00000428554 CALR3Q96L12 384 aaKnown RBP4.84□□□□□ -1.63
CCDC30-203ENST00000428554 RAB11FIP3O75154 756 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 CENPBP07199 599 aaPredicted RBP4.83□□□□□ -1.64
CCDC30-203ENST00000428554 SLC4A3P48751 1232 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 MORN1Q5T089 497 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 NME8Q8N427 588 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 LRCH3Q96II8 777 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 CCDC136Q96JN2 1154 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.83□□□□□ -1.64
CCDC30-203ENST00000428554 SLC27A5Q9Y2P5 690 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 PER1O15534 1290 aaPredicted RBP4.83□□□□□ -1.64
CCDC30-203ENST00000428554 BCAMP50895 628 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms