RNA–Protein interactions for RNA: ENST00000428400.5

CDK16-203, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 3,016 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-203ENST00000428400 YTHDC2Q9H6S0 1430 aaKnown RBP15.47■□□□□ 0.07
CDK16-203ENST00000428400 FYB1O15117 783 aa15.46■□□□□ 0.07
CDK16-203ENST00000428400 WDR63Q8IWG1 891 aa15.46■□□□□ 0.07
CDK16-203ENST00000428400 NSD2O96028 1365 aa15.46■□□□□ 0.07
CDK16-203ENST00000428400 RRAGDQ9NQL2 400 aaPredicted RBP15.46■□□□□ 0.07
CDK16-203ENST00000428400 PDE4CQ08493 712 aa15.45■□□□□ 0.06
CDK16-203ENST00000428400 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
CDK16-203ENST00000428400 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
CDK16-203ENST00000428400 PCDHB15Q9Y5E8 787 aa15.45■□□□□ 0.06
CDK16-203ENST00000428400 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
CDK16-203ENST00000428400 AAMPQ13685 434 aa15.44■□□□□ 0.06
CDK16-203ENST00000428400 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
CDK16-203ENST00000428400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDK16-203ENST00000428400 DDRGK1Q96HY6 314 aa15.44■□□□□ 0.06
CDK16-203ENST00000428400 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
CDK16-203ENST00000428400 CD163L1Q9NR16 1453 aa15.44■□□□□ 0.06
CDK16-203ENST00000428400 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
CDK16-203ENST00000428400 FGD1P98174 961 aa15.43■□□□□ 0.06
CDK16-203ENST00000428400 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
CDK16-203ENST00000428400 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
CDK16-203ENST00000428400 NINLQ9Y2I6 1382 aa15.42■□□□□ 0.06
CDK16-203ENST00000428400 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
CDK16-203ENST00000428400 ATAD2Q6PL18 1390 aa15.42■□□□□ 0.06
CDK16-203ENST00000428400 PLEKHF1Q96S99 279 aa15.42■□□□□ 0.06
CDK16-203ENST00000428400 TMPOP42166 694 aaKnown RBP15.41■□□□□ 0.06
CDK16-203ENST00000428400 EXOSC9Q06265 439 aaKnown RBP15.41■□□□□ 0.06
CDK16-203ENST00000428400 PNNQ9H307 717 aaKnown RBP15.41■□□□□ 0.06
CDK16-203ENST00000428400 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
CDK16-203ENST00000428400 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
CDK16-203ENST00000428400 SEC24BO95487 1268 aa15.41■□□□□ 0.06
CDK16-203ENST00000428400 TRIM35Q9UPQ4 493 aa15.41■□□□□ 0.06
CDK16-203ENST00000428400 COL3A1P02461 1466 aaPredicted RBP15.4■□□□□ 0.06
CDK16-203ENST00000428400 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
CDK16-203ENST00000428400 HDGFL2Q7Z4V5 671 aaPredicted RBP15.4■□□□□ 0.06
CDK16-203ENST00000428400 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
CDK16-203ENST00000428400 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
CDK16-203ENST00000428400 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
CDK16-203ENST00000428400 RIPK4P57078 832 aa15.38■□□□□ 0.05
CDK16-203ENST00000428400 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
CDK16-203ENST00000428400 ARHGEF40Q8TER5 1519 aa15.37■□□□□ 0.05
CDK16-203ENST00000428400 FRAT2O75474 233 aaPredicted RBP15.37■□□□□ 0.05
CDK16-203ENST00000428400 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
CDK16-203ENST00000428400 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
CDK16-203ENST00000428400 ARXQ96QS3 562 aa15.36■□□□□ 0.05
CDK16-203ENST00000428400 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
CDK16-203ENST00000428400 MVPQ14764 893 aaKnown RBP15.36■□□□□ 0.05
CDK16-203ENST00000428400 ANKRD26Q9UPS8 1709 aa15.36■□□□□ 0.05
CDK16-203ENST00000428400 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
CDK16-203ENST00000428400 PMFBP1Q8TBY8 1022 aa15.35■□□□□ 0.05
CDK16-203ENST00000428400 USP19O94966 1318 aa15.35■□□□□ 0.05
CDK16-203ENST00000428400 DIP2BQ9P265 1576 aa15.35■□□□□ 0.05
CDK16-203ENST00000428400 HMOX1P09601 288 aa15.35■□□□□ 0.05
CDK16-203ENST00000428400 TRIM27P14373 513 aa15.35■□□□□ 0.05
CDK16-203ENST00000428400 DZIP1LQ8IYY4 767 aaKnown RBP15.35■□□□□ 0.05
CDK16-203ENST00000428400 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
CDK16-203ENST00000428400 A2ML1A8K2U0 1454 aa15.34■□□□□ 0.05
CDK16-203ENST00000428400 VIRMAQ69YN4 1812 aaKnown RBP15.34■□□□□ 0.05
CDK16-203ENST00000428400 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
CDK16-203ENST00000428400 RIMS2Q9UQ26 1411 aa15.34■□□□□ 0.05
CDK16-203ENST00000428400 PRKAR2BP31323 418 aa15.33■□□□□ 0.05
CDK16-203ENST00000428400 THUMPD2Q9BTF0 503 aaKnown RBP15.33■□□□□ 0.05
CDK16-203ENST00000428400 KIF20BQ96Q89 1820 aa15.33■□□□□ 0.05
CDK16-203ENST00000428400 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
CDK16-203ENST00000428400 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
CDK16-203ENST00000428400 POLKQ9UBT6 870 aa15.33■□□□□ 0.04
CDK16-203ENST00000428400 NOB1Q9ULX3 412 aaKnown RBP15.33■□□□□ 0.04
CDK16-203ENST00000428400 LRRC7Q96NW7 1537 aa15.32■□□□□ 0.04
CDK16-203ENST00000428400 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
CDK16-203ENST00000428400 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
CDK16-203ENST00000428400 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
CDK16-203ENST00000428400 NME9Q86XW9 330 aa15.32■□□□□ 0.04
CDK16-203ENST00000428400 MED14O60244 1454 aa15.31■□□□□ 0.04
CDK16-203ENST00000428400 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
CDK16-203ENST00000428400 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
CDK16-203ENST00000428400 METP08581 1390 aa15.3■□□□□ 0.04
CDK16-203ENST00000428400 PNPLA6Q8IY17 1366 aa15.3■□□□□ 0.04
CDK16-203ENST00000428400 ATF7IPQ6VMQ6 1270 aa15.3■□□□□ 0.04
CDK16-203ENST00000428400 TMEM57Q8N5G2 664 aa15.29■□□□□ 0.04
CDK16-203ENST00000428400 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
CDK16-203ENST00000428400 MAP2P11137 1827 aaKnown RBP15.28■□□□□ 0.04
CDK16-203ENST00000428400 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
CDK16-203ENST00000428400 RRS1Q15050 365 aaKnown RBP15.28■□□□□ 0.04
CDK16-203ENST00000428400 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
CDK16-203ENST00000428400 PPIP5K1Q6PFW1 1433 aa15.28■□□□□ 0.04
CDK16-203ENST00000428400 ELL2O00472 640 aaPredicted RBP15.27■□□□□ 0.04
CDK16-203ENST00000428400 SPATA31D1Q6ZQQ2 1576 aa15.27■□□□□ 0.04
CDK16-203ENST00000428400 WASLO00401 505 aaPredicted RBP15.27■□□□□ 0.03
CDK16-203ENST00000428400 NUTM2FA1L443 756 aa15.26■□□□□ 0.03
CDK16-203ENST00000428400 FCHSD2O94868 740 aa15.26■□□□□ 0.03
CDK16-203ENST00000428400 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
CDK16-203ENST00000428400 FAM135BQ49AJ0 1406 aa15.25■□□□□ 0.03
CDK16-203ENST00000428400 PDIA4P13667 645 aaKnown RBP15.25■□□□□ 0.03
CDK16-203ENST00000428400 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
CDK16-203ENST00000428400 ATP7BP35670 1465 aa15.25■□□□□ 0.03
CDK16-203ENST00000428400 IL16Q14005 1332 aa15.25■□□□□ 0.03
CDK16-203ENST00000428400 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
CDK16-203ENST00000428400 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
CDK16-203ENST00000428400 DDX19BQ9UMR2 479 aa15.25■□□□□ 0.03
CDK16-203ENST00000428400 NUDT16Q96DE0 195 aaKnown RBP15.25■□□□□ 0.03
CDK16-203ENST00000428400 AGLP35573 1532 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms