RNA–Protein interactions for RNA: ENST00000428260.1

ZNF646-203, Transcript of zinc finger protein 646, humanhuman

TSL 3

Gene ZNF646, Length 1,077 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF646-203ENST00000428260 TRPM3Q9HCF6 1732 aaPredicted RBP28.48■■■□□ 2.15
ZNF646-203ENST00000428260 ACEP12821 1306 aa28.47■■■□□ 2.15
ZNF646-203ENST00000428260 SBNO1A3KN83 1393 aa28.46■■■□□ 2.15
ZNF646-203ENST00000428260 NGLY1Q96IV0 654 aa28.45■■■□□ 2.14
ZNF646-203ENST00000428260 POLR3AO14802 1390 aaPredicted RBP28.45■■■□□ 2.14
ZNF646-203ENST00000428260 NINLQ9Y2I6 1382 aa28.43■■■□□ 2.14
ZNF646-203ENST00000428260 C11orf95C9JLR9 678 aaPredicted RBP28.42■■■□□ 2.14
ZNF646-203ENST00000428260 PLEKHG5O94827 1062 aa28.42■■■□□ 2.14
ZNF646-203ENST00000428260 SLC12A5Q9H2X9 1139 aa28.42■■■□□ 2.14
ZNF646-203ENST00000428260 ABCA3Q99758 1704 aa28.41■■■□□ 2.14
ZNF646-203ENST00000428260 LMOD2Q6P5Q4 547 aa28.41■■■□□ 2.14
ZNF646-203ENST00000428260 ALS2Q96Q42 1657 aa28.41■■■□□ 2.14
ZNF646-203ENST00000428260 MYOM1P52179 1685 aa28.4■■■□□ 2.14
ZNF646-203ENST00000428260 CABLES1Q8TDN4 633 aa28.39■■■□□ 2.14
ZNF646-203ENST00000428260 AKAP12Q02952 1782 aa28.39■■■□□ 2.13
ZNF646-203ENST00000428260 HDGFL2Q7Z4V5 671 aaPredicted RBP28.38■■■□□ 2.13
ZNF646-203ENST00000428260 TERF2IPQ9NYB0 399 aa28.38■■■□□ 2.13
ZNF646-203ENST00000428260 KIF7Q2M1P5 1343 aa28.38■■■□□ 2.13
ZNF646-203ENST00000428260 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
ZNF646-203ENST00000428260 USP6P35125 1406 aa28.36■■■□□ 2.13
ZNF646-203ENST00000428260 CD163L1Q9NR16 1453 aa28.36■■■□□ 2.13
ZNF646-203ENST00000428260 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
ZNF646-203ENST00000428260 RXRBP28702 533 aa28.36■■■□□ 2.13
ZNF646-203ENST00000428260 QTRT2Q9H974 415 aaKnown RBP28.36■■■□□ 2.13
ZNF646-203ENST00000428260 KTN1Q86UP2 1357 aaKnown RBP28.36■■■□□ 2.13
ZNF646-203ENST00000428260 CPSF1Q10570 1443 aaKnown RBP28.35■■■□□ 2.13
ZNF646-203ENST00000428260 FNBP4Q8N3X1 1017 aaPredicted RBP28.35■■■□□ 2.13
ZNF646-203ENST00000428260 ZNF692Q9BU19 519 aaPredicted RBP28.35■■■□□ 2.13
ZNF646-203ENST00000428260 USP21Q9UK80 565 aa28.35■■■□□ 2.13
ZNF646-203ENST00000428260 MON2Q7Z3U7 1717 aa28.34■■■□□ 2.13
ZNF646-203ENST00000428260 A0A1W2PP64 1363 aa28.34■■■□□ 2.13
ZNF646-203ENST00000428260 CCDC7Q96M83 1385 aa28.33■■■□□ 2.13
ZNF646-203ENST00000428260 HAP1P54257 671 aaPredicted RBP28.32■■■□□ 2.12
ZNF646-203ENST00000428260 ANKRD36BQ8N2N9 1353 aa28.32■■■□□ 2.12
ZNF646-203ENST00000428260 BCL9LQ86UU0 1499 aa28.31■■■□□ 2.12
ZNF646-203ENST00000428260 CRYBG1Q9Y4K1 1723 aa28.3■■■□□ 2.12
ZNF646-203ENST00000428260 NRKQ7Z2Y5 1582 aa28.3■■■□□ 2.12
ZNF646-203ENST00000428260 BRD4O60885 1362 aaPredicted RBP28.3■■■□□ 2.12
ZNF646-203ENST00000428260 WASHC2AQ641Q2 1341 aa28.3■■■□□ 2.12
ZNF646-203ENST00000428260 ATRNO75882 1429 aa28.27■■■□□ 2.12
ZNF646-203ENST00000428260 PLCH1Q4KWH8 1693 aa28.27■■■□□ 2.12
ZNF646-203ENST00000428260 RBM6P78332 1123 aaKnown RBP28.27■■■□□ 2.12
ZNF646-203ENST00000428260 SLIT2O94813 1529 aa28.27■■■□□ 2.12
ZNF646-203ENST00000428260 CDK12Q9NYV4 1490 aaPredicted RBP28.27■■■□□ 2.12
ZNF646-203ENST00000428260 EDC4Q6P2E9 1401 aaKnown RBP28.26■■■□□ 2.12
ZNF646-203ENST00000428260 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.26■■■□□ 2.12
ZNF646-203ENST00000428260 TRPC5Q9UL62 973 aaPredicted RBP28.26■■■□□ 2.11
ZNF646-203ENST00000428260 RGS12O14924 1447 aa28.26■■■□□ 2.11
ZNF646-203ENST00000428260 SSH2Q76I76 1423 aa28.26■■■□□ 2.11
ZNF646-203ENST00000428260 TTC21BQ7Z4L5 1316 aa28.25■■■□□ 2.11
ZNF646-203ENST00000428260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.24■■■□□ 2.11
ZNF646-203ENST00000428260 ABTB2Q8N961 1025 aa28.24■■■□□ 2.11
ZNF646-203ENST00000428260 TTC21AQ8NDW8 1320 aa28.22■■■□□ 2.11
ZNF646-203ENST00000428260 NUTM2GQ5VZR2 741 aa28.22■■■□□ 2.11
ZNF646-203ENST00000428260 PIK3C2AO00443 1686 aa28.21■■■□□ 2.11
ZNF646-203ENST00000428260 PHRF1Q9P1Y6 1649 aaKnown RBP28.21■■■□□ 2.11
ZNF646-203ENST00000428260 NSD3Q9BZ95 1437 aa28.2■■■□□ 2.11
ZNF646-203ENST00000428260 FAM83GA6ND36 823 aa28.2■■■□□ 2.1
ZNF646-203ENST00000428260 PANK3Q9H999 370 aa28.2■■■□□ 2.1
ZNF646-203ENST00000428260 NWD2Q9ULI1 1742 aa28.2■■■□□ 2.1
ZNF646-203ENST00000428260 UNC5CLQ8IV45 518 aa28.19■■■□□ 2.1
ZNF646-203ENST00000428260 CARD14Q9BXL6 1004 aa28.17■■■□□ 2.1
ZNF646-203ENST00000428260 NLRP6P59044 892 aa28.16■■■□□ 2.1
ZNF646-203ENST00000428260 NME9Q86XW9 330 aa28.16■■■□□ 2.1
ZNF646-203ENST00000428260 COL14A1Q05707 1796 aaKnown RBP28.15■■■□□ 2.1
ZNF646-203ENST00000428260 NLRP13Q86W25 1043 aa28.15■■■□□ 2.1
ZNF646-203ENST00000428260 GLI3P10071 1580 aa28.15■■■□□ 2.1
ZNF646-203ENST00000428260 NRAPQ86VF7 1730 aa28.15■■■□□ 2.1
ZNF646-203ENST00000428260 GJD4Q96KN9 370 aaPredicted RBP28.14■■■□□ 2.1
ZNF646-203ENST00000428260 KIF20BQ96Q89 1820 aa28.12■■■□□ 2.09
ZNF646-203ENST00000428260 ZRANB1Q9UGI0 708 aa28.11■■■□□ 2.09
ZNF646-203ENST00000428260 ZNF316A6NFI3 1004 aaPredicted RBP28.09■■■□□ 2.09
ZNF646-203ENST00000428260 BTG4Q9NY30 223 aa28.09■■■□□ 2.09
ZNF646-203ENST00000428260 USP19O94966 1318 aa28.09■■■□□ 2.09
ZNF646-203ENST00000428260 CGNL1Q0VF96 1302 aa28.09■■■□□ 2.09
ZNF646-203ENST00000428260 USP31Q70CQ4 1352 aa28.09■■■□□ 2.09
ZNF646-203ENST00000428260 KIAA0232Q92628 1395 aa28.09■■■□□ 2.09
ZNF646-203ENST00000428260 USP54Q70EL1 1684 aa28.07■■■□□ 2.08
ZNF646-203ENST00000428260 ZC3H6P61129 1189 aaKnown RBP28.07■■■□□ 2.08
ZNF646-203ENST00000428260 VPS72Q15906 364 aa28.07■■■□□ 2.08
ZNF646-203ENST00000428260 UPF1Q92900 1129 aaKnown RBP eCLIP28.07■■■□□ 2.08
ZNF646-203ENST00000428260 PRDM11Q9NQV5 511 aa28.07■■■□□ 2.08
ZNF646-203ENST00000428260 KNSTRNQ9Y448 316 aa28.07■■■□□ 2.08
ZNF646-203ENST00000428260 FYB1O15117 783 aa28.06■■■□□ 2.08
ZNF646-203ENST00000428260 CHRNA2Q15822 529 aa28.06■■■□□ 2.08
ZNF646-203ENST00000428260 GGNBP2Q9H3C7 697 aa28.06■■■□□ 2.08
ZNF646-203ENST00000428260 OVOS2A0A0J9YW53 1432 aa28.06■■■□□ 2.08
ZNF646-203ENST00000428260 OVOS2Q6IE36 1432 aa28.06■■■□□ 2.08
ZNF646-203ENST00000428260 SLIT3O75094 1523 aa28.06■■■□□ 2.08
ZNF646-203ENST00000428260 COG3Q96JB2 828 aa28.05■■■□□ 2.08
ZNF646-203ENST00000428260 SOX12O15370 315 aa28.04■■■□□ 2.08
ZNF646-203ENST00000428260 CCDC9Q9Y3X0 531 aaKnown RBP28.04■■■□□ 2.08
ZNF646-203ENST00000428260 BRWD3Q6RI45 1802 aa28.02■■■□□ 2.08
ZNF646-203ENST00000428260 GCP02774 474 aa28.02■■■□□ 2.08
ZNF646-203ENST00000428260 KCNH5Q8NCM2 988 aa28.01■■■□□ 2.07
ZNF646-203ENST00000428260 DDX10Q13206 875 aaKnown RBP28■■■□□ 2.07
ZNF646-203ENST00000428260 ANKRD26Q9UPS8 1709 aa27.98■■■□□ 2.07
ZNF646-203ENST00000428260 ZBTB7CA1YPR0 619 aa27.98■■■□□ 2.07
ZNF646-203ENST00000428260 PER1O15534 1290 aaPredicted RBP27.98■■■□□ 2.07
ZNF646-203ENST00000428260 NSD2O96028 1365 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms