RNA–Protein interactions for RNA: ENST00000428020.5

TMEM40-203, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM40, Length 431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-203ENST00000428020 FOXO3O43524 673 aa13.95□□□□□ -0.18
TMEM40-203ENST00000428020 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
TMEM40-203ENST00000428020 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
TMEM40-203ENST00000428020 BRD4O60885 1362 aaPredicted RBP13.94□□□□□ -0.18
TMEM40-203ENST00000428020 NSD2O96028 1365 aa13.94□□□□□ -0.18
TMEM40-203ENST00000428020 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
TMEM40-203ENST00000428020 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
TMEM40-203ENST00000428020 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
TMEM40-203ENST00000428020 TTC21AQ8NDW8 1320 aa13.93□□□□□ -0.18
TMEM40-203ENST00000428020 RALBP1Q15311 655 aa13.93□□□□□ -0.18
TMEM40-203ENST00000428020 BRINP3Q76B58 766 aa13.93□□□□□ -0.18
TMEM40-203ENST00000428020 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
TMEM40-203ENST00000428020 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
TMEM40-203ENST00000428020 MIER1Q8N108 512 aa13.92□□□□□ -0.18
TMEM40-203ENST00000428020 PRKRIP1Q9H875 184 aaPredicted RBP13.92□□□□□ -0.18
TMEM40-203ENST00000428020 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
TMEM40-203ENST00000428020 FYB1O15117 783 aa13.91□□□□□ -0.18
TMEM40-203ENST00000428020 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
TMEM40-203ENST00000428020 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
TMEM40-203ENST00000428020 NME9Q86XW9 330 aa13.9□□□□□ -0.18
TMEM40-203ENST00000428020 COG3Q96JB2 828 aa13.9□□□□□ -0.18
TMEM40-203ENST00000428020 NRKQ7Z2Y5 1582 aa13.9□□□□□ -0.18
TMEM40-203ENST00000428020 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
TMEM40-203ENST00000428020 ABTB2Q8N961 1025 aa13.89□□□□□ -0.19
TMEM40-203ENST00000428020 SSH2Q76I76 1423 aa13.89□□□□□ -0.19
TMEM40-203ENST00000428020 PARD3Q8TEW0 1356 aa13.88□□□□□ -0.19
TMEM40-203ENST00000428020 DDX17Q92841 729 aaKnown RBP13.88□□□□□ -0.19
TMEM40-203ENST00000428020 ROBO1Q9Y6N7 1651 aa13.88□□□□□ -0.19
TMEM40-203ENST00000428020 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
TMEM40-203ENST00000428020 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
TMEM40-203ENST00000428020 ANKRD26Q9UPS8 1709 aa13.87□□□□□ -0.19
TMEM40-203ENST00000428020 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
TMEM40-203ENST00000428020 NLRP6P59044 892 aa13.87□□□□□ -0.19
TMEM40-203ENST00000428020 SBNO1A3KN83 1393 aa13.86□□□□□ -0.19
TMEM40-203ENST00000428020 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
TMEM40-203ENST00000428020 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
TMEM40-203ENST00000428020 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
TMEM40-203ENST00000428020 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
TMEM40-203ENST00000428020 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
TMEM40-203ENST00000428020 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
TMEM40-203ENST00000428020 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
TMEM40-203ENST00000428020 PXDNQ92626 1479 aa13.84□□□□□ -0.19
TMEM40-203ENST00000428020 PIK3C2AO00443 1686 aa13.84□□□□□ -0.19
TMEM40-203ENST00000428020 SOS2Q07890 1332 aaPredicted RBP13.84□□□□□ -0.19
TMEM40-203ENST00000428020 ARHGEF10O15013 1369 aa13.83□□□□□ -0.19
TMEM40-203ENST00000428020 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
TMEM40-203ENST00000428020 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
TMEM40-203ENST00000428020 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
TMEM40-203ENST00000428020 OVOS2A0A0J9YW53 1432 aa13.82□□□□□ -0.2
TMEM40-203ENST00000428020 OVOS2Q6IE36 1432 aa13.82□□□□□ -0.2
TMEM40-203ENST00000428020 SOX12O15370 315 aa13.82□□□□□ -0.2
TMEM40-203ENST00000428020 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
TMEM40-203ENST00000428020 AHDC1Q5TGY3 1603 aaPredicted RBP13.82□□□□□ -0.2
TMEM40-203ENST00000428020 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
TMEM40-203ENST00000428020 LRRC59Q96AG4 307 aaKnown RBP13.81□□□□□ -0.2
TMEM40-203ENST00000428020 MRS2Q9HD23 443 aa13.81□□□□□ -0.2
TMEM40-203ENST00000428020 ALS2Q96Q42 1657 aa13.8□□□□□ -0.2
TMEM40-203ENST00000428020 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
TMEM40-203ENST00000428020 PHLPP1O60346 1717 aa13.8□□□□□ -0.2
TMEM40-203ENST00000428020 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
TMEM40-203ENST00000428020 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
TMEM40-203ENST00000428020 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
TMEM40-203ENST00000428020 MTHFSP49914 203 aa13.78□□□□□ -0.2
TMEM40-203ENST00000428020 AATKQ6ZMQ8 1374 aa13.78□□□□□ -0.2
TMEM40-203ENST00000428020 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
TMEM40-203ENST00000428020 USP19O94966 1318 aa13.76□□□□□ -0.21
TMEM40-203ENST00000428020 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
TMEM40-203ENST00000428020 GCP02774 474 aa13.76□□□□□ -0.21
TMEM40-203ENST00000428020 FBLN1P23142 703 aa13.76□□□□□ -0.21
TMEM40-203ENST00000428020 AMPHP49418 695 aa13.76□□□□□ -0.21
TMEM40-203ENST00000428020 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
TMEM40-203ENST00000428020 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
TMEM40-203ENST00000428020 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
TMEM40-203ENST00000428020 SLIT3O75094 1523 aa13.74□□□□□ -0.21
TMEM40-203ENST00000428020 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
TMEM40-203ENST00000428020 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
TMEM40-203ENST00000428020 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
TMEM40-203ENST00000428020 COL16A1Q07092 1604 aaPredicted RBP13.74□□□□□ -0.21
TMEM40-203ENST00000428020 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
TMEM40-203ENST00000428020 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
TMEM40-203ENST00000428020 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
TMEM40-203ENST00000428020 PHRF1Q9P1Y6 1649 aaKnown RBP13.72□□□□□ -0.21
TMEM40-203ENST00000428020 ZC3H6P61129 1189 aaKnown RBP13.72□□□□□ -0.21
TMEM40-203ENST00000428020 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
TMEM40-203ENST00000428020 NUDCQ9Y266 331 aa13.72□□□□□ -0.21
TMEM40-203ENST00000428020 NFAT5O94916 1531 aa13.72□□□□□ -0.21
TMEM40-203ENST00000428020 SMG6Q86US8 1419 aaKnown RBP13.72□□□□□ -0.21
TMEM40-203ENST00000428020 CDK12Q9NYV4 1490 aaPredicted RBP13.71□□□□□ -0.21
TMEM40-203ENST00000428020 LTN1O94822 1766 aa13.71□□□□□ -0.22
TMEM40-203ENST00000428020 FLT4P35916 1363 aa13.71□□□□□ -0.22
TMEM40-203ENST00000428020 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
TMEM40-203ENST00000428020 DIAPH1O60610 1272 aaKnown RBP13.7□□□□□ -0.22
TMEM40-203ENST00000428020 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
TMEM40-203ENST00000428020 JCADQ9P266 1359 aa13.7□□□□□ -0.22
TMEM40-203ENST00000428020 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
TMEM40-203ENST00000428020 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
TMEM40-203ENST00000428020 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
TMEM40-203ENST00000428020 U2SURPO15042 1029 aaKnown RBP13.68□□□□□ -0.22
TMEM40-203ENST00000428020 HOXC9P31274 260 aa13.68□□□□□ -0.22
TMEM40-203ENST00000428020 HSP90AB2PQ58FF8 381 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms