RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CD163L1Q9NR16 1453 aa20.88■□□□□ 0.93
VARS2-203ENST00000428017 ARHGEF10O15013 1369 aa20.87■□□□□ 0.93
VARS2-203ENST00000428017 TTC21BQ7Z4L5 1316 aa20.86■□□□□ 0.93
VARS2-203ENST00000428017 ABTB2Q8N961 1025 aa20.86■□□□□ 0.93
VARS2-203ENST00000428017 PANK3Q9H999 370 aa20.86■□□□□ 0.93
VARS2-203ENST00000428017 TTC21AQ8NDW8 1320 aa20.85■□□□□ 0.93
VARS2-203ENST00000428017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
VARS2-203ENST00000428017 EDC4Q6P2E9 1401 aaKnown RBP20.85■□□□□ 0.93
VARS2-203ENST00000428017 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
VARS2-203ENST00000428017 PNPLA6Q8IY17 1366 aa20.83■□□□□ 0.92
VARS2-203ENST00000428017 MYOM1P52179 1685 aa20.83■□□□□ 0.92
VARS2-203ENST00000428017 SSH2Q76I76 1423 aa20.82■□□□□ 0.92
VARS2-203ENST00000428017 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
VARS2-203ENST00000428017 HAP1P54257 671 aaPredicted RBP20.82■□□□□ 0.92
VARS2-203ENST00000428017 NUTM2GQ5VZR2 741 aa20.82■□□□□ 0.92
VARS2-203ENST00000428017 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
VARS2-203ENST00000428017 AKAP12Q02952 1782 aa20.8■□□□□ 0.92
VARS2-203ENST00000428017 NLRP6P59044 892 aa20.8■□□□□ 0.92
VARS2-203ENST00000428017 NLRP13Q86W25 1043 aa20.8■□□□□ 0.92
VARS2-203ENST00000428017 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
VARS2-203ENST00000428017 SPATA31A6Q5VVP1 1343 aa20.79■□□□□ 0.92
VARS2-203ENST00000428017 TRPM3Q9HCF6 1732 aaPredicted RBP20.79■□□□□ 0.92
VARS2-203ENST00000428017 CARD14Q9BXL6 1004 aa20.79■□□□□ 0.92
VARS2-203ENST00000428017 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
VARS2-203ENST00000428017 NUTM2BA6NNL0 878 aaPredicted RBP20.78■□□□□ 0.92
VARS2-203ENST00000428017 NUTM2EB1AL46 878 aaPredicted RBP20.78■□□□□ 0.92
VARS2-203ENST00000428017 NME9Q86XW9 330 aa20.78■□□□□ 0.92
VARS2-203ENST00000428017 NUTM2AQ8IVF1 878 aaPredicted RBP20.78■□□□□ 0.92
VARS2-203ENST00000428017 MON2Q7Z3U7 1717 aa20.78■□□□□ 0.92
VARS2-203ENST00000428017 NRKQ7Z2Y5 1582 aa20.76■□□□□ 0.91
VARS2-203ENST00000428017 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
VARS2-203ENST00000428017 COG3Q96JB2 828 aa20.75■□□□□ 0.91
VARS2-203ENST00000428017 SHPRHQ149N8 1683 aa20.74■□□□□ 0.91
VARS2-203ENST00000428017 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
VARS2-203ENST00000428017 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
VARS2-203ENST00000428017 MEX3CQ5U5Q3 659 aaKnown RBP20.73■□□□□ 0.91
VARS2-203ENST00000428017 GGNBP2Q9H3C7 697 aa20.73■□□□□ 0.91
VARS2-203ENST00000428017 FYB1O15117 783 aa20.72■□□□□ 0.91
VARS2-203ENST00000428017 USP31Q70CQ4 1352 aa20.72■□□□□ 0.91
VARS2-203ENST00000428017 ADAMTS2O95450 1211 aa20.71■□□□□ 0.91
VARS2-203ENST00000428017 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
VARS2-203ENST00000428017 ZRANB1Q9UGI0 708 aa20.71■□□□□ 0.91
VARS2-203ENST00000428017 USP19O94966 1318 aa20.71■□□□□ 0.91
VARS2-203ENST00000428017 COL22A1Q8NFW1 1626 aaPredicted RBP20.71■□□□□ 0.91
VARS2-203ENST00000428017 SOX12O15370 315 aa20.7■□□□□ 0.9
VARS2-203ENST00000428017 PIK3C2AO00443 1686 aa20.7■□□□□ 0.9
VARS2-203ENST00000428017 MED1Q15648 1581 aaPredicted RBP20.69■□□□□ 0.9
VARS2-203ENST00000428017 GCP02774 474 aa20.69■□□□□ 0.9
VARS2-203ENST00000428017 NSD2O96028 1365 aa20.69■□□□□ 0.9
VARS2-203ENST00000428017 PER1O15534 1290 aaPredicted RBP20.68■□□□□ 0.9
VARS2-203ENST00000428017 OVOS2A0A0J9YW53 1432 aa20.67■□□□□ 0.9
VARS2-203ENST00000428017 OVOS2Q6IE36 1432 aa20.67■□□□□ 0.9
VARS2-203ENST00000428017 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
VARS2-203ENST00000428017 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
VARS2-203ENST00000428017 ZBTB7CA1YPR0 619 aa20.65■□□□□ 0.9
VARS2-203ENST00000428017 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
VARS2-203ENST00000428017 CC2D1BQ5T0F9 858 aaKnown RBP20.65■□□□□ 0.9
VARS2-203ENST00000428017 MORC1Q86VD1 984 aa20.65■□□□□ 0.9
VARS2-203ENST00000428017 PRDM11Q9NQV5 511 aa20.65■□□□□ 0.9
VARS2-203ENST00000428017 C8orf37Q96NL8 207 aa20.64■□□□□ 0.89
VARS2-203ENST00000428017 LRP6O75581 1613 aa20.64■□□□□ 0.89
VARS2-203ENST00000428017 SLIT3O75094 1523 aa20.63■□□□□ 0.89
VARS2-203ENST00000428017 NGLY1Q96IV0 654 aa20.63■□□□□ 0.89
VARS2-203ENST00000428017 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
VARS2-203ENST00000428017 NPC1L1Q9UHC9 1359 aa20.61■□□□□ 0.89
VARS2-203ENST00000428017 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
VARS2-203ENST00000428017 KIF20BQ96Q89 1820 aa20.61■□□□□ 0.89
VARS2-203ENST00000428017 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
VARS2-203ENST00000428017 PHRF1Q9P1Y6 1649 aaKnown RBP20.6■□□□□ 0.89
VARS2-203ENST00000428017 CPDO75976 1380 aa20.59■□□□□ 0.89
VARS2-203ENST00000428017 ABCA3Q99758 1704 aa20.58■□□□□ 0.89
VARS2-203ENST00000428017 USP54Q70EL1 1684 aa20.58■□□□□ 0.89
VARS2-203ENST00000428017 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
VARS2-203ENST00000428017 CHRNA2Q15822 529 aa20.58■□□□□ 0.89
VARS2-203ENST00000428017 ARHGEF25Q86VW2 580 aa20.57■□□□□ 0.88
VARS2-203ENST00000428017 CRYBG1Q9Y4K1 1723 aa20.57■□□□□ 0.88
VARS2-203ENST00000428017 AMPHP49418 695 aa20.56■□□□□ 0.88
VARS2-203ENST00000428017 NFAT5O94916 1531 aa20.56■□□□□ 0.88
VARS2-203ENST00000428017 RRS1Q15050 365 aaKnown RBP20.55■□□□□ 0.88
VARS2-203ENST00000428017 MARF1Q9Y4F3 1742 aaKnown RBP20.55■□□□□ 0.88
VARS2-203ENST00000428017 AFF2P51816 1311 aa20.54■□□□□ 0.88
VARS2-203ENST00000428017 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
VARS2-203ENST00000428017 FBLN1P23142 703 aa20.54■□□□□ 0.88
VARS2-203ENST00000428017 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
VARS2-203ENST00000428017 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
VARS2-203ENST00000428017 MAP3K19Q56UN5 1328 aa20.53■□□□□ 0.88
VARS2-203ENST00000428017 FNBP4Q8N3X1 1017 aaPredicted RBP20.53■□□□□ 0.88
VARS2-203ENST00000428017 USP21Q9UK80 565 aa20.53■□□□□ 0.88
VARS2-203ENST00000428017 EVA1CP58658 441 aa20.52■□□□□ 0.88
VARS2-203ENST00000428017 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
VARS2-203ENST00000428017 ANKRD26Q9UPS8 1709 aa20.5■□□□□ 0.87
VARS2-203ENST00000428017 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
VARS2-203ENST00000428017 UNC5CLQ8IV45 518 aa20.5■□□□□ 0.87
VARS2-203ENST00000428017 IP6K1Q92551 441 aa20.5■□□□□ 0.87
VARS2-203ENST00000428017 EMILIN1Q9Y6C2 1016 aa20.5■□□□□ 0.87
VARS2-203ENST00000428017 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
VARS2-203ENST00000428017 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
VARS2-203ENST00000428017 SLIT2O94813 1529 aa20.49■□□□□ 0.87
VARS2-203ENST00000428017 RALBP1Q15311 655 aa20.49■□□□□ 0.87
VARS2-203ENST00000428017 STRN4Q9NRL3 753 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms