RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 C11orf95C9JLR9 678 aaPredicted RBP11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 PUS7Q96PZ0 661 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 TECPR2O15040 1411 aa11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
SMARCAL1-206ENST00000427645 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
SMARCAL1-206ENST00000427645 DDX10Q13206 875 aaKnown RBP11.41□□□□□ -0.58
SMARCAL1-206ENST00000427645 PMFBP1Q8TBY8 1022 aa11.41□□□□□ -0.58
SMARCAL1-206ENST00000427645 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
SMARCAL1-206ENST00000427645 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
SMARCAL1-206ENST00000427645 DEFB132Q7Z7B7 95 aa11.4□□□□□ -0.58
SMARCAL1-206ENST00000427645 CCDC9Q9Y3X0 531 aaKnown RBP11.4□□□□□ -0.58
SMARCAL1-206ENST00000427645 PSME1Q06323 249 aa11.39□□□□□ -0.59
SMARCAL1-206ENST00000427645 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
SMARCAL1-206ENST00000427645 ARHGEF28Q8N1W1 1705 aaKnown RBP11.39□□□□□ -0.59
SMARCAL1-206ENST00000427645 SLIT2O94813 1529 aa11.39□□□□□ -0.59
SMARCAL1-206ENST00000427645 EVC2Q86UK5 1308 aa11.38□□□□□ -0.59
SMARCAL1-206ENST00000427645 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
SMARCAL1-206ENST00000427645 GLI3P10071 1580 aa11.38□□□□□ -0.59
SMARCAL1-206ENST00000427645 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
SMARCAL1-206ENST00000427645 QRICH2Q9H0J4 1663 aa11.37□□□□□ -0.59
SMARCAL1-206ENST00000427645 FAM83GA6ND36 823 aa11.37□□□□□ -0.59
SMARCAL1-206ENST00000427645 CCDC125Q86Z20 511 aa11.37□□□□□ -0.59
SMARCAL1-206ENST00000427645 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
SMARCAL1-206ENST00000427645 A0A0G2JS52 829 aa11.36□□□□□ -0.59
SMARCAL1-206ENST00000427645 DCAF8L1A6NGE4 600 aa11.36□□□□□ -0.59
SMARCAL1-206ENST00000427645 MYT1Q01538 1121 aa11.36□□□□□ -0.59
SMARCAL1-206ENST00000427645 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
SMARCAL1-206ENST00000427645 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
SMARCAL1-206ENST00000427645 VPS72Q15906 364 aa11.35□□□□□ -0.59
SMARCAL1-206ENST00000427645 FAM182BQ5T319 152 aa11.35□□□□□ -0.59
SMARCAL1-206ENST00000427645 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
SMARCAL1-206ENST00000427645 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
SMARCAL1-206ENST00000427645 BLMP54132 1417 aaPredicted RBP11.34□□□□□ -0.59
SMARCAL1-206ENST00000427645 RGPD8O14715 1765 aaPredicted RBP11.33□□□□□ -0.59
SMARCAL1-206ENST00000427645 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-206ENST00000427645 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
SMARCAL1-206ENST00000427645 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
SMARCAL1-206ENST00000427645 KIF1AQ12756 1690 aa11.33□□□□□ -0.6
SMARCAL1-206ENST00000427645 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
SMARCAL1-206ENST00000427645 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 WASLO00401 505 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 ANP32CO43423 234 aa11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 SRPK2P78362 688 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 SF3B2Q13435 895 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 CDK19Q9BWU1 502 aa11.32□□□□□ -0.6
SMARCAL1-206ENST00000427645 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-206ENST00000427645 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-206ENST00000427645 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-206ENST00000427645 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
SMARCAL1-206ENST00000427645 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
SMARCAL1-206ENST00000427645 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
SMARCAL1-206ENST00000427645 NGDNQ8NEJ9 315 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-206ENST00000427645 PANK3Q9H999 370 aa11.29□□□□□ -0.6
SMARCAL1-206ENST00000427645 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
SMARCAL1-206ENST00000427645 PLCH1Q4KWH8 1693 aa11.28□□□□□ -0.6
SMARCAL1-206ENST00000427645 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-206ENST00000427645 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
SMARCAL1-206ENST00000427645 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
SMARCAL1-206ENST00000427645 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
SMARCAL1-206ENST00000427645 TULP4Q9NRJ4 1543 aa11.28□□□□□ -0.6
SMARCAL1-206ENST00000427645 ANKARQ7Z5J8 1434 aa11.27□□□□□ -0.6
SMARCAL1-206ENST00000427645 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-206ENST00000427645 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
SMARCAL1-206ENST00000427645 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
SMARCAL1-206ENST00000427645 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 ADGRB2O60241 1585 aa11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 PRDM11Q9NQV5 511 aa11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-206ENST00000427645 BAG6P46379 1132 aa11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 MIER1Q8N108 512 aa11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 NUDT16Q96DE0 195 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 USP35Q9P2H5 1018 aa11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 SPATA31A5Q5VU36 1347 aa11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 SPATA31A7Q8IWB4 1347 aa11.25□□□□□ -0.61
SMARCAL1-206ENST00000427645 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
SMARCAL1-206ENST00000427645 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 NWD2Q9ULI1 1742 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 R3HDM1Q15032 1099 aaKnown RBP11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 RALBP1Q15311 655 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 EZH2Q15910 746 aaKnown RBP11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 MYOM1P52179 1685 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 NRAPQ86VF7 1730 aa11.23□□□□□ -0.61
SMARCAL1-206ENST00000427645 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
SMARCAL1-206ENST00000427645 CCER2I3L3R5 266 aa11.22□□□□□ -0.61
SMARCAL1-206ENST00000427645 TRIM37O94972 964 aa11.22□□□□□ -0.61
SMARCAL1-206ENST00000427645 PRKRIP1Q9H875 184 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms