RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 BAG4O95429 457 aaKnown RBP15.48■□□□□ 0.07
LRTOMT-206ENST00000427369 KLHL40Q2TBA0 621 aa15.48■□□□□ 0.07
LRTOMT-206ENST00000427369 ANKRD45Q5TZF3 282 aa15.48■□□□□ 0.07
LRTOMT-206ENST00000427369 FAM13BQ9NYF5 915 aa15.48■□□□□ 0.07
LRTOMT-206ENST00000427369 U2SURPO15042 1029 aaKnown RBP15.48■□□□□ 0.07
LRTOMT-206ENST00000427369 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
LRTOMT-206ENST00000427369 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
LRTOMT-206ENST00000427369 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
LRTOMT-206ENST00000427369 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
LRTOMT-206ENST00000427369 TBC1D9Q6ZT07 1266 aa15.46■□□□□ 0.07
LRTOMT-206ENST00000427369 AFAP1Q8N556 730 aa15.46■□□□□ 0.07
LRTOMT-206ENST00000427369 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
LRTOMT-206ENST00000427369 MCTP1Q6DN14 999 aa15.46■□□□□ 0.07
LRTOMT-206ENST00000427369 CAVIN1Q6NZI2 390 aaKnown RBP15.46■□□□□ 0.06
LRTOMT-206ENST00000427369 TRIM35Q9UPQ4 493 aa15.46■□□□□ 0.06
LRTOMT-206ENST00000427369 TMPOP42166 694 aaKnown RBP15.45■□□□□ 0.06
LRTOMT-206ENST00000427369 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
LRTOMT-206ENST00000427369 IPO8O15397 1037 aaKnown RBP15.44■□□□□ 0.06
LRTOMT-206ENST00000427369 C1orf115Q9H7X2 142 aa15.44■□□□□ 0.06
LRTOMT-206ENST00000427369 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
LRTOMT-206ENST00000427369 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
LRTOMT-206ENST00000427369 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
LRTOMT-206ENST00000427369 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
LRTOMT-206ENST00000427369 IBTKQ9P2D0 1353 aaPredicted RBP15.43■□□□□ 0.06
LRTOMT-206ENST00000427369 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
LRTOMT-206ENST00000427369 CD109Q6YHK3 1445 aa15.43■□□□□ 0.06
LRTOMT-206ENST00000427369 ZSCAN23Q3MJ62 389 aa15.43■□□□□ 0.06
LRTOMT-206ENST00000427369 ARID3AQ99856 593 aa15.43■□□□□ 0.06
LRTOMT-206ENST00000427369 CLEC17AQ6ZS10 378 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 RBSNQ9H1K0 784 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 NOS1P29475 1434 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 ZNF445P59923 1031 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 MYOM2P54296 1465 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 PLCH2O75038 1416 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 KIF3BO15066 747 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 TMEM132EQ6IEE7 984 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 PLEKHF1Q96S99 279 aa15.42■□□□□ 0.06
LRTOMT-206ENST00000427369 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
LRTOMT-206ENST00000427369 TERF1P54274 439 aa15.41■□□□□ 0.06
LRTOMT-206ENST00000427369 UQCRHLA0A096LP55 91 aa15.41■□□□□ 0.06
LRTOMT-206ENST00000427369 UQCRHP07919 91 aa15.41■□□□□ 0.06
LRTOMT-206ENST00000427369 NOL7Q9UMY1 257 aaKnown RBP15.41■□□□□ 0.06
LRTOMT-206ENST00000427369 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 TET3O43151 1660 aa15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 ABCC11Q96J66 1382 aa15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 PKP1Q13835 747 aa15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 MYO3AQ8NEV4 1616 aa15.4■□□□□ 0.06
LRTOMT-206ENST00000427369 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 ADGRL1O94910 1474 aa15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 ABCC1P33527 1531 aa15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 PPIP5K1Q6PFW1 1433 aa15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
LRTOMT-206ENST00000427369 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
LRTOMT-206ENST00000427369 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
LRTOMT-206ENST00000427369 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
LRTOMT-206ENST00000427369 CDC45O75419 566 aa15.37■□□□□ 0.05
LRTOMT-206ENST00000427369 MAP7D2Q96T17 732 aa15.37■□□□□ 0.05
LRTOMT-206ENST00000427369 ZBTB7BO15156 539 aaPredicted RBP15.37■□□□□ 0.05
LRTOMT-206ENST00000427369 NUCB2P80303 420 aa15.37■□□□□ 0.05
LRTOMT-206ENST00000427369 PDLIM2Q96JY6 352 aa15.37■□□□□ 0.05
LRTOMT-206ENST00000427369 IL16Q14005 1332 aa15.36■□□□□ 0.05
LRTOMT-206ENST00000427369 QRICH2Q9H0J4 1663 aa15.36■□□□□ 0.05
LRTOMT-206ENST00000427369 GGNBP2Q9H3C7 697 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 KIF1BO60333 1816 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 RABEP1Q15276 862 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 ZKSCAN5Q9Y2L8 839 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 GPT2Q8TD30 523 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 CABP2Q9NPB3 220 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
LRTOMT-206ENST00000427369 ZFYVE16Q7Z3T8 1539 aa15.34■□□□□ 0.05
LRTOMT-206ENST00000427369 USP32Q8NFA0 1604 aa15.34■□□□□ 0.05
LRTOMT-206ENST00000427369 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
LRTOMT-206ENST00000427369 CHAMP1Q96JM3 812 aa15.34■□□□□ 0.05
LRTOMT-206ENST00000427369 CYP2E1P05181 493 aaPredicted RBP15.34■□□□□ 0.05
LRTOMT-206ENST00000427369 MROH2AA6NES4 1674 aa15.34■□□□□ 0.05
LRTOMT-206ENST00000427369 ANKRD36BQ8N2N9 1353 aa15.33■□□□□ 0.04
LRTOMT-206ENST00000427369 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.04
LRTOMT-206ENST00000427369 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
LRTOMT-206ENST00000427369 NEURL4Q96JN8 1562 aa15.33■□□□□ 0.04
LRTOMT-206ENST00000427369 NRXN1Q9ULB1 1477 aa15.33■□□□□ 0.04
LRTOMT-206ENST00000427369 NSD2O96028 1365 aa15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 SYCE3A1L190 88 aa15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 ARHGAP31Q2M1Z3 1444 aa15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 IFT172Q9UG01 1749 aa15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
LRTOMT-206ENST00000427369 EVC2Q86UK5 1308 aa15.31■□□□□ 0.04
LRTOMT-206ENST00000427369 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
LRTOMT-206ENST00000427369 RNF214Q8ND24 703 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms