RNA–Protein interactions for RNA: ENST00000427137.1

TTC4P1-201, Transcript of tetratricopeptide repeat domain 4 pseudogene 1, humanhuman

BASIC

Gene TTC4P1, Length 1,158 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4P1-201ENST00000427137 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.49
TTC4P1-201ENST00000427137 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
TTC4P1-201ENST00000427137 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
TTC4P1-201ENST00000427137 QRICH2Q9H0J4 1663 aa11.95□□□□□ -0.5
TTC4P1-201ENST00000427137 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
TTC4P1-201ENST00000427137 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
TTC4P1-201ENST00000427137 PSME1Q06323 249 aa11.94□□□□□ -0.5
TTC4P1-201ENST00000427137 PLEKHH1Q9ULM0 1364 aa11.93□□□□□ -0.5
TTC4P1-201ENST00000427137 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
TTC4P1-201ENST00000427137 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
TTC4P1-201ENST00000427137 RGPD8O14715 1765 aaPredicted RBP11.92□□□□□ -0.5
TTC4P1-201ENST00000427137 SAFB2Q14151 953 aaKnown RBP eCLIP11.92□□□□□ -0.5
TTC4P1-201ENST00000427137 RALBP1Q15311 655 aa11.92□□□□□ -0.5
TTC4P1-201ENST00000427137 ZNF772Q68DY9 489 aaPredicted RBP11.92□□□□□ -0.5
TTC4P1-201ENST00000427137 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
TTC4P1-201ENST00000427137 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
TTC4P1-201ENST00000427137 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
TTC4P1-201ENST00000427137 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
TTC4P1-201ENST00000427137 MINK1Q8N4C8 1332 aaPredicted RBP11.9□□□□□ -0.5
TTC4P1-201ENST00000427137 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
TTC4P1-201ENST00000427137 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
TTC4P1-201ENST00000427137 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.5
TTC4P1-201ENST00000427137 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
TTC4P1-201ENST00000427137 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
TTC4P1-201ENST00000427137 FOXO3O43524 673 aa11.89□□□□□ -0.51
TTC4P1-201ENST00000427137 NUTM2BA6NNL0 878 aaPredicted RBP11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 NUTM2EB1AL46 878 aaPredicted RBP11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 SOCS7O14512 581 aa11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 PANK3Q9H999 370 aa11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 ATAD2Q6PL18 1390 aa11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 PXDNQ92626 1479 aa11.88□□□□□ -0.51
TTC4P1-201ENST00000427137 ARHGEF10O15013 1369 aa11.87□□□□□ -0.51
TTC4P1-201ENST00000427137 MARF1Q9Y4F3 1742 aaKnown RBP11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 ILDR2Q71H61 639 aa11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
TTC4P1-201ENST00000427137 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
TTC4P1-201ENST00000427137 SRPK2P78362 688 aaKnown RBP11.85□□□□□ -0.51
TTC4P1-201ENST00000427137 LRP6O75581 1613 aa11.85□□□□□ -0.51
TTC4P1-201ENST00000427137 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
TTC4P1-201ENST00000427137 SPATA31A3Q5VYP0 1347 aa11.85□□□□□ -0.51
TTC4P1-201ENST00000427137 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
TTC4P1-201ENST00000427137 NUDT16Q96DE0 195 aaKnown RBP11.84□□□□□ -0.51
TTC4P1-201ENST00000427137 NGLY1Q96IV0 654 aa11.84□□□□□ -0.51
TTC4P1-201ENST00000427137 CDK19Q9BWU1 502 aa11.84□□□□□ -0.51
TTC4P1-201ENST00000427137 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
TTC4P1-201ENST00000427137 MYBBP1AQ9BQG0 1328 aaKnown RBP11.84□□□□□ -0.51
TTC4P1-201ENST00000427137 PMFBP1Q8TBY8 1022 aa11.83□□□□□ -0.52
TTC4P1-201ENST00000427137 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
TTC4P1-201ENST00000427137 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
TTC4P1-201ENST00000427137 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
TTC4P1-201ENST00000427137 MYOM1P52179 1685 aa11.83□□□□□ -0.52
TTC4P1-201ENST00000427137 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
TTC4P1-201ENST00000427137 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
TTC4P1-201ENST00000427137 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
TTC4P1-201ENST00000427137 AFF2P51816 1311 aa11.82□□□□□ -0.52
TTC4P1-201ENST00000427137 ATP7BP35670 1465 aa11.82□□□□□ -0.52
TTC4P1-201ENST00000427137 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 BRD4O60885 1362 aaPredicted RBP11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 ADAMTS2O95450 1211 aa11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 XPCQ01831 940 aaPredicted RBP11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 HDGFL2Q7Z4V5 671 aaPredicted RBP11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 NLRP13Q86W25 1043 aa11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
TTC4P1-201ENST00000427137 PARD3Q8TEW0 1356 aa11.8□□□□□ -0.52
TTC4P1-201ENST00000427137 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
TTC4P1-201ENST00000427137 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
TTC4P1-201ENST00000427137 RXRBP28702 533 aa11.8□□□□□ -0.52
TTC4P1-201ENST00000427137 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
TTC4P1-201ENST00000427137 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
TTC4P1-201ENST00000427137 NSD2O96028 1365 aa11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 POTEAQ6S8J7 498 aa11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 TRPC5Q9UL62 973 aaPredicted RBP11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 CGNL1Q0VF96 1302 aa11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
TTC4P1-201ENST00000427137 ALS2Q96Q42 1657 aa11.78□□□□□ -0.52
TTC4P1-201ENST00000427137 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.78□□□□□ -0.52
TTC4P1-201ENST00000427137 RBM6P78332 1123 aaKnown RBP11.78□□□□□ -0.52
TTC4P1-201ENST00000427137 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
TTC4P1-201ENST00000427137 CABP2Q9NPB3 220 aa11.78□□□□□ -0.52
TTC4P1-201ENST00000427137 USP21Q9UK80 565 aa11.78□□□□□ -0.52
TTC4P1-201ENST00000427137 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.52
TTC4P1-201ENST00000427137 CC2D1BQ5T0F9 858 aaKnown RBP11.77□□□□□ -0.53
TTC4P1-201ENST00000427137 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
TTC4P1-201ENST00000427137 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
TTC4P1-201ENST00000427137 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.53
TTC4P1-201ENST00000427137 ABCA3Q99758 1704 aa11.77□□□□□ -0.53
TTC4P1-201ENST00000427137 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
TTC4P1-201ENST00000427137 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms