RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.39
SMIM12-203ENST00000426886 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
SMIM12-203ENST00000426886 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
SMIM12-203ENST00000426886 C11orf95C9JLR9 678 aaPredicted RBP17.45■□□□□ 0.38
SMIM12-203ENST00000426886 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
SMIM12-203ENST00000426886 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
SMIM12-203ENST00000426886 ARHGEF10O15013 1369 aa17.44■□□□□ 0.38
SMIM12-203ENST00000426886 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
SMIM12-203ENST00000426886 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
SMIM12-203ENST00000426886 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
SMIM12-203ENST00000426886 SHPRHQ149N8 1683 aa17.44■□□□□ 0.38
SMIM12-203ENST00000426886 USP6P35125 1406 aa17.44■□□□□ 0.38
SMIM12-203ENST00000426886 NLRP6P59044 892 aa17.43■□□□□ 0.38
SMIM12-203ENST00000426886 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
SMIM12-203ENST00000426886 SOX12O15370 315 aa17.41■□□□□ 0.38
SMIM12-203ENST00000426886 RGS17Q9UGC6 210 aaPredicted RBP17.41■□□□□ 0.38
SMIM12-203ENST00000426886 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
SMIM12-203ENST00000426886 CPSF1Q10570 1443 aaKnown RBP17.41■□□□□ 0.38
SMIM12-203ENST00000426886 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
SMIM12-203ENST00000426886 ZC3H6P61129 1189 aaKnown RBP17.4■□□□□ 0.38
SMIM12-203ENST00000426886 CD163L1Q9NR16 1453 aa17.39■□□□□ 0.38
SMIM12-203ENST00000426886 TRPM3Q9HCF6 1732 aaPredicted RBP17.39■□□□□ 0.38
SMIM12-203ENST00000426886 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
SMIM12-203ENST00000426886 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
SMIM12-203ENST00000426886 NME9Q86XW9 330 aa17.39■□□□□ 0.37
SMIM12-203ENST00000426886 AFF2P51816 1311 aa17.39■□□□□ 0.37
SMIM12-203ENST00000426886 SSH2Q76I76 1423 aa17.37■□□□□ 0.37
SMIM12-203ENST00000426886 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
SMIM12-203ENST00000426886 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
SMIM12-203ENST00000426886 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
SMIM12-203ENST00000426886 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
SMIM12-203ENST00000426886 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
SMIM12-203ENST00000426886 GCP02774 474 aa17.35■□□□□ 0.37
SMIM12-203ENST00000426886 USP21Q9UK80 565 aa17.35■□□□□ 0.37
SMIM12-203ENST00000426886 COL22A1Q8NFW1 1626 aaPredicted RBP17.35■□□□□ 0.37
SMIM12-203ENST00000426886 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
SMIM12-203ENST00000426886 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
SMIM12-203ENST00000426886 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
SMIM12-203ENST00000426886 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
SMIM12-203ENST00000426886 PRDM11Q9NQV5 511 aa17.34■□□□□ 0.37
SMIM12-203ENST00000426886 BRD4O60885 1362 aaPredicted RBP17.33■□□□□ 0.36
SMIM12-203ENST00000426886 ZNF772Q68DY9 489 aaPredicted RBP17.33■□□□□ 0.36
SMIM12-203ENST00000426886 ILDR2Q71H61 639 aa17.33■□□□□ 0.36
SMIM12-203ENST00000426886 PANK3Q9H999 370 aa17.33■□□□□ 0.36
SMIM12-203ENST00000426886 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
SMIM12-203ENST00000426886 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
SMIM12-203ENST00000426886 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
SMIM12-203ENST00000426886 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
SMIM12-203ENST00000426886 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
SMIM12-203ENST00000426886 FNBP4Q8N3X1 1017 aaPredicted RBP17.31■□□□□ 0.36
SMIM12-203ENST00000426886 BTG4Q9NY30 223 aa17.31■□□□□ 0.36
SMIM12-203ENST00000426886 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
SMIM12-203ENST00000426886 FBLN1P23142 703 aa17.3■□□□□ 0.36
SMIM12-203ENST00000426886 USP19O94966 1318 aa17.3■□□□□ 0.36
SMIM12-203ENST00000426886 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
SMIM12-203ENST00000426886 FYB1O15117 783 aa17.29■□□□□ 0.36
SMIM12-203ENST00000426886 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
SMIM12-203ENST00000426886 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
SMIM12-203ENST00000426886 PIK3C2AO00443 1686 aa17.28■□□□□ 0.36
SMIM12-203ENST00000426886 NSD3Q9BZ95 1437 aa17.28■□□□□ 0.36
SMIM12-203ENST00000426886 COG3Q96JB2 828 aa17.28■□□□□ 0.36
SMIM12-203ENST00000426886 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
SMIM12-203ENST00000426886 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
SMIM12-203ENST00000426886 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.36
SMIM12-203ENST00000426886 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
SMIM12-203ENST00000426886 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
SMIM12-203ENST00000426886 MYOM1P52179 1685 aa17.26■□□□□ 0.35
SMIM12-203ENST00000426886 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
SMIM12-203ENST00000426886 NRKQ7Z2Y5 1582 aa17.25■□□□□ 0.35
SMIM12-203ENST00000426886 RXRBP28702 533 aa17.25■□□□□ 0.35
SMIM12-203ENST00000426886 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
SMIM12-203ENST00000426886 ABCA3Q99758 1704 aa17.25■□□□□ 0.35
SMIM12-203ENST00000426886 EVA1CP58658 441 aa17.24■□□□□ 0.35
SMIM12-203ENST00000426886 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
SMIM12-203ENST00000426886 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
SMIM12-203ENST00000426886 SLIT2O94813 1529 aa17.23■□□□□ 0.35
SMIM12-203ENST00000426886 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
SMIM12-203ENST00000426886 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
SMIM12-203ENST00000426886 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
SMIM12-203ENST00000426886 ARHGEF25Q86VW2 580 aa17.22■□□□□ 0.35
SMIM12-203ENST00000426886 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
SMIM12-203ENST00000426886 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
SMIM12-203ENST00000426886 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
SMIM12-203ENST00000426886 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
SMIM12-203ENST00000426886 RBM6P78332 1123 aaKnown RBP17.21■□□□□ 0.35
SMIM12-203ENST00000426886 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
SMIM12-203ENST00000426886 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
SMIM12-203ENST00000426886 OVOS2A0A0J9YW53 1432 aa17.2■□□□□ 0.34
SMIM12-203ENST00000426886 OVOS2Q6IE36 1432 aa17.2■□□□□ 0.34
SMIM12-203ENST00000426886 CPDO75976 1380 aa17.2■□□□□ 0.34
SMIM12-203ENST00000426886 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SMIM12-203ENST00000426886 SLIT3O75094 1523 aa17.2■□□□□ 0.34
SMIM12-203ENST00000426886 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
SMIM12-203ENST00000426886 VPS72Q15906 364 aa17.18■□□□□ 0.34
SMIM12-203ENST00000426886 A0A0G2JS52 829 aa17.18■□□□□ 0.34
SMIM12-203ENST00000426886 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
SMIM12-203ENST00000426886 ATRNO75882 1429 aa17.17■□□□□ 0.34
SMIM12-203ENST00000426886 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
SMIM12-203ENST00000426886 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
SMIM12-203ENST00000426886 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms