RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 AGLP35573 1532 aa20.22■□□□□ 0.83
PKP4-205ENST00000426248 RRS1Q15050 365 aaKnown RBP20.21■□□□□ 0.83
PKP4-205ENST00000426248 LRPPRCP42704 1394 aaKnown RBP20.21■□□□□ 0.83
PKP4-205ENST00000426248 FAM161AQ3B820 660 aa20.21■□□□□ 0.83
PKP4-205ENST00000426248 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
PKP4-205ENST00000426248 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
PKP4-205ENST00000426248 TRPM1Q7Z4N2 1603 aa20.21■□□□□ 0.83
PKP4-205ENST00000426248 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
PKP4-205ENST00000426248 BCORL1Q5H9F3 1711 aa20.2■□□□□ 0.82
PKP4-205ENST00000426248 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
PKP4-205ENST00000426248 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
PKP4-205ENST00000426248 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
PKP4-205ENST00000426248 UPF2Q9HAU5 1272 aaKnown RBP20.18■□□□□ 0.82
PKP4-205ENST00000426248 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
PKP4-205ENST00000426248 FYB1O15117 783 aa20.17■□□□□ 0.82
PKP4-205ENST00000426248 PANK2Q9BZ23 570 aa20.17■□□□□ 0.82
PKP4-205ENST00000426248 MADDQ8WXG6 1647 aa20.17■□□□□ 0.82
PKP4-205ENST00000426248 FOXO3O43524 673 aa20.17■□□□□ 0.82
PKP4-205ENST00000426248 ACEP12821 1306 aa20.16■□□□□ 0.82
PKP4-205ENST00000426248 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.16■□□□□ 0.82
PKP4-205ENST00000426248 FAM13BQ9NYF5 915 aa20.16■□□□□ 0.82
PKP4-205ENST00000426248 SYNMO15061 1565 aa20.15■□□□□ 0.82
PKP4-205ENST00000426248 PARD3Q8TEW0 1356 aa20.15■□□□□ 0.82
PKP4-205ENST00000426248 ANP32BQ92688 251 aaKnown RBP20.14■□□□□ 0.82
PKP4-205ENST00000426248 A0A1W2PP64 1363 aa20.14■□□□□ 0.81
PKP4-205ENST00000426248 ANKRD36BQ8N2N9 1353 aa20.14■□□□□ 0.81
PKP4-205ENST00000426248 KIF13AQ9H1H9 1805 aa20.14■□□□□ 0.81
PKP4-205ENST00000426248 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
PKP4-205ENST00000426248 TCP11L2Q8N4U5 519 aa20.13■□□□□ 0.81
PKP4-205ENST00000426248 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
PKP4-205ENST00000426248 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
PKP4-205ENST00000426248 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
PKP4-205ENST00000426248 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
PKP4-205ENST00000426248 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
PKP4-205ENST00000426248 PHF8Q9UPP1 1060 aa20.1■□□□□ 0.81
PKP4-205ENST00000426248 CSB-PGBD3P0DP91 1061 aa20.1■□□□□ 0.81
PKP4-205ENST00000426248 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
PKP4-205ENST00000426248 ROBO2Q9HCK4 1378 aa20.09■□□□□ 0.81
PKP4-205ENST00000426248 CLCN1P35523 988 aa20.09■□□□□ 0.81
PKP4-205ENST00000426248 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
PKP4-205ENST00000426248 A0A0G2JS52 829 aa20.08■□□□□ 0.81
PKP4-205ENST00000426248 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.81
PKP4-205ENST00000426248 XRCC6P12956 609 aaKnown RBP eCLIP20.08■□□□□ 0.81
PKP4-205ENST00000426248 RIPK4P57078 832 aa20.08■□□□□ 0.8
PKP4-205ENST00000426248 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
PKP4-205ENST00000426248 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
PKP4-205ENST00000426248 PUS7Q96PZ0 661 aaKnown RBP20.07■□□□□ 0.8
PKP4-205ENST00000426248 PIK3C2BO00750 1634 aa20.07■□□□□ 0.8
PKP4-205ENST00000426248 PRKAR2BP31323 418 aa20.07■□□□□ 0.8
PKP4-205ENST00000426248 NEXMIFQ5QGS0 1516 aa20.06■□□□□ 0.8
PKP4-205ENST00000426248 ESPNB1AK53 854 aa20.06■□□□□ 0.8
PKP4-205ENST00000426248 BCL2L13Q9BXK5 485 aa20.06■□□□□ 0.8
PKP4-205ENST00000426248 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
PKP4-205ENST00000426248 ELL2O00472 640 aaPredicted RBP20.05■□□□□ 0.8
PKP4-205ENST00000426248 PDE4CQ08493 712 aa20.05■□□□□ 0.8
PKP4-205ENST00000426248 RTF1Q92541 710 aaKnown RBP20.05■□□□□ 0.8
PKP4-205ENST00000426248 ZC3H13Q5T200 1668 aaKnown RBP20.05■□□□□ 0.8
PKP4-205ENST00000426248 NINLQ9Y2I6 1382 aa20.03■□□□□ 0.8
PKP4-205ENST00000426248 ALKQ9UM73 1620 aa20.03■□□□□ 0.8
PKP4-205ENST00000426248 MSNP26038 577 aaKnown RBP20.03■□□□□ 0.8
PKP4-205ENST00000426248 KIAA1211Q6ZU35 1233 aa20.03■□□□□ 0.8
PKP4-205ENST00000426248 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.8
PKP4-205ENST00000426248 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
PKP4-205ENST00000426248 CENPQQ7L2Z9 268 aaPredicted RBP20.02■□□□□ 0.8
PKP4-205ENST00000426248 PDCL3Q9H2J4 239 aa20.02■□□□□ 0.8
PKP4-205ENST00000426248 ZHX1Q9UKY1 873 aaPredicted RBP20.02■□□□□ 0.8
PKP4-205ENST00000426248 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
PKP4-205ENST00000426248 TPRNQ4KMQ1 711 aa20.02■□□□□ 0.79
PKP4-205ENST00000426248 PRDM10Q9NQV6 1147 aa20.02■□□□□ 0.79
PKP4-205ENST00000426248 ORAI2Q96SN7 254 aa20■□□□□ 0.79
PKP4-205ENST00000426248 E9PSI1 815 aa19.99■□□□□ 0.79
PKP4-205ENST00000426248 C20orf194Q5TEA3 1177 aa19.99■□□□□ 0.79
PKP4-205ENST00000426248 CLUAP1Q96AJ1 413 aa19.99■□□□□ 0.79
PKP4-205ENST00000426248 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
PKP4-205ENST00000426248 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
PKP4-205ENST00000426248 TPM2P07951 284 aa19.99■□□□□ 0.79
PKP4-205ENST00000426248 SIGLEC1Q9BZZ2 1709 aa19.98■□□□□ 0.79
PKP4-205ENST00000426248 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
PKP4-205ENST00000426248 POLKQ9UBT6 870 aa19.97■□□□□ 0.79
PKP4-205ENST00000426248 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
PKP4-205ENST00000426248 SPATA31D1Q6ZQQ2 1576 aa19.97■□□□□ 0.79
PKP4-205ENST00000426248 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
PKP4-205ENST00000426248 MRE11P49959 708 aa19.96■□□□□ 0.79
PKP4-205ENST00000426248 NSD2O96028 1365 aa19.96■□□□□ 0.79
PKP4-205ENST00000426248 SIRT1Q96EB6 747 aa19.96■□□□□ 0.79
PKP4-205ENST00000426248 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.79
PKP4-205ENST00000426248 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
PKP4-205ENST00000426248 AAMPQ13685 434 aa19.95■□□□□ 0.78
PKP4-205ENST00000426248 NRXN1Q9ULB1 1477 aa19.95■□□□□ 0.78
PKP4-205ENST00000426248 TRAK2O60296 914 aa19.95■□□□□ 0.78
PKP4-205ENST00000426248 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
PKP4-205ENST00000426248 R3HCC1Q9Y3T6 440 aaKnown RBP19.94■□□□□ 0.78
PKP4-205ENST00000426248 TSR2Q969E8 191 aaKnown RBP19.94■□□□□ 0.78
PKP4-205ENST00000426248 REREQ9P2R6 1566 aa19.93■□□□□ 0.78
PKP4-205ENST00000426248 KRT28Q7Z3Y7 464 aa19.93■□□□□ 0.78
PKP4-205ENST00000426248 THUMPD2Q9BTF0 503 aaKnown RBP19.93■□□□□ 0.78
PKP4-205ENST00000426248 SMC4Q9NTJ3 1288 aa19.93■□□□□ 0.78
PKP4-205ENST00000426248 C8orf34Q49A92 452 aa19.92■□□□□ 0.78
PKP4-205ENST00000426248 WWC1Q8IX03 1113 aa19.92■□□□□ 0.78
PKP4-205ENST00000426248 NCLP19338 710 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms