RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 BAG4O95429 457 aaKnown RBP14.04□□□□□ -0.16
SEC61A1-202ENST00000424880 UTP14CQ5TAP6 766 aaKnown RBP14.04□□□□□ -0.16
SEC61A1-202ENST00000424880 ZSCAN23Q3MJ62 389 aa14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 MTERF4Q7Z6M4 381 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 NEO1Q92859 1461 aa14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 ATP7AQ04656 1500 aa14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 PRPF40AO75400 957 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 MVPQ14764 893 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 SKOR2Q2VWA4 1001 aaPredicted RBP14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 KIF2CQ99661 725 aa14.03□□□□□ -0.16
SEC61A1-202ENST00000424880 SMC5Q8IY18 1101 aa14.02□□□□□ -0.16
SEC61A1-202ENST00000424880 CD109Q6YHK3 1445 aa14.02□□□□□ -0.16
SEC61A1-202ENST00000424880 INO80Q9ULG1 1556 aaPredicted RBP14.02□□□□□ -0.16
SEC61A1-202ENST00000424880 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.17
SEC61A1-202ENST00000424880 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
SEC61A1-202ENST00000424880 NOL7Q9UMY1 257 aaKnown RBP14.02□□□□□ -0.17
SEC61A1-202ENST00000424880 SYCE3A1L190 88 aa14.02□□□□□ -0.17
SEC61A1-202ENST00000424880 NSFL1CQ9UNZ2 370 aaKnown RBP14.02□□□□□ -0.17
SEC61A1-202ENST00000424880 VGLL3A8MV65 326 aa14.01□□□□□ -0.17
SEC61A1-202ENST00000424880 ZBTB22O15209 634 aa14.01□□□□□ -0.17
SEC61A1-202ENST00000424880 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
SEC61A1-202ENST00000424880 DZIP1LQ8IYY4 767 aaKnown RBP14.01□□□□□ -0.17
SEC61A1-202ENST00000424880 SMC4Q9NTJ3 1288 aa14.01□□□□□ -0.17
SEC61A1-202ENST00000424880 KIF3BO15066 747 aa14□□□□□ -0.17
SEC61A1-202ENST00000424880 PTMAP06454 111 aaKnown RBP14□□□□□ -0.17
SEC61A1-202ENST00000424880 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
SEC61A1-202ENST00000424880 KLHL40Q2TBA0 621 aa14□□□□□ -0.17
SEC61A1-202ENST00000424880 K7ELQ4 463 aaPredicted RBP13.99□□□□□ -0.17
SEC61A1-202ENST00000424880 TRIM27P14373 513 aa13.99□□□□□ -0.17
SEC61A1-202ENST00000424880 ATP10AO60312 1499 aa13.99□□□□□ -0.17
SEC61A1-202ENST00000424880 A2MP01023 1474 aa13.99□□□□□ -0.17
SEC61A1-202ENST00000424880 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 ANKRD45Q5TZF3 282 aa13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 ZKSCAN5Q9Y2L8 839 aa13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 DMTNQ08495 405 aa13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 ATP2B3Q16720 1220 aa13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 CHMP4BQ9H444 224 aaKnown RBP13.98□□□□□ -0.17
SEC61A1-202ENST00000424880 KIDINS220Q9ULH0 1771 aa13.97□□□□□ -0.17
SEC61A1-202ENST00000424880 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
SEC61A1-202ENST00000424880 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
SEC61A1-202ENST00000424880 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
SEC61A1-202ENST00000424880 TMEM57Q8N5G2 664 aa13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 ZNF500O60304 480 aaPredicted RBP13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 PPP4R3BQ5MIZ7 849 aa13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 RICTORQ6R327 1708 aa13.96□□□□□ -0.17
SEC61A1-202ENST00000424880 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.18
SEC61A1-202ENST00000424880 CCDC94Q9BW85 323 aaPredicted RBP13.96□□□□□ -0.18
SEC61A1-202ENST00000424880 NCOA3Q9Y6Q9 1424 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 RAPGEF3O95398 923 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 SNX21Q969T3 373 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 FRMPD1Q5SYB0 1578 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 ZNF518AQ6AHZ1 1483 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 GPRASP1Q5JY77 1395 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 ZNF710Q8N1W2 664 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 SSH1Q8WYL5 1049 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
SEC61A1-202ENST00000424880 SASS6Q6UVJ0 657 aa13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 TBC1D9Q6ZT07 1266 aa13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 MROH1Q8NDA8 1641 aa13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 HS1BP3Q53T59 392 aa13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 CIZ1Q9ULV3 898 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-202ENST00000424880 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
SEC61A1-202ENST00000424880 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
SEC61A1-202ENST00000424880 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
SEC61A1-202ENST00000424880 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
SEC61A1-202ENST00000424880 PTPRTO14522 1441 aa13.93□□□□□ -0.18
SEC61A1-202ENST00000424880 APBB1O00213 710 aa13.92□□□□□ -0.18
SEC61A1-202ENST00000424880 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-202ENST00000424880 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC61A1-202ENST00000424880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■□□□ 11.9
SEC61A1-202ENST00000424880 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
SEC61A1-202ENST00000424880 TTC12Q9H892 705 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-202ENST00000424880 CHD1LQ86WJ1 897 aa13.92□□□□□ -0.18
SEC61A1-202ENST00000424880 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
SEC61A1-202ENST00000424880 PDLIM2Q96JY6 352 aa13.91□□□□□ -0.18
SEC61A1-202ENST00000424880 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
SEC61A1-202ENST00000424880 PRDM15P57071 1507 aaPredicted RBP13.91□□□□□ -0.18
SEC61A1-202ENST00000424880 MTHFSP49914 203 aa13.91□□□□□ -0.18
SEC61A1-202ENST00000424880 PTMSP20962 102 aa13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 ZNF445P59923 1031 aa13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 STAC3Q96MF2 364 aa13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.18
SEC61A1-202ENST00000424880 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 TRPM2O94759 1503 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 ARHGEF40Q8TER5 1519 aa13.89□□□□□ -0.19
SEC61A1-202ENST00000424880 MLH3Q9UHC1 1453 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms