RNA–Protein interactions for RNA: ENST00000424747.1

SLC52A1-202, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-202ENST00000424747 ADGRB2O60241 1585 aa21.73■■□□□ 1.07
SLC52A1-202ENST00000424747 WAPLQ7Z5K2 1190 aa21.72■■□□□ 1.07
SLC52A1-202ENST00000424747 USP19O94966 1318 aa21.71■■□□□ 1.07
SLC52A1-202ENST00000424747 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
SLC52A1-202ENST00000424747 HDGFL2Q7Z4V5 671 aaPredicted RBP21.7■■□□□ 1.06
SLC52A1-202ENST00000424747 CABP1Q9NZU7 370 aa21.7■■□□□ 1.06
SLC52A1-202ENST00000424747 FYB1O15117 783 aa21.7■■□□□ 1.06
SLC52A1-202ENST00000424747 U2AF1L5P0DN76 240 aaPredicted RBP21.7■■□□□ 1.06
SLC52A1-202ENST00000424747 U2AF1Q01081 240 aaKnown RBP eCLIP21.7■■□□□ 1.06
SLC52A1-202ENST00000424747 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
SLC52A1-202ENST00000424747 RLBP1P12271 317 aa21.68■■□□□ 1.06
SLC52A1-202ENST00000424747 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
SLC52A1-202ENST00000424747 SETD1AO15047 1707 aaKnown RBP21.67■■□□□ 1.06
SLC52A1-202ENST00000424747 MYH16Q9H6N6 1097 aa21.67■■□□□ 1.06
SLC52A1-202ENST00000424747 TNNQ9UQP3 1299 aa21.67■■□□□ 1.06
SLC52A1-202ENST00000424747 DLC1Q96QB1 1528 aa21.67■■□□□ 1.06
SLC52A1-202ENST00000424747 GSE1Q14687 1217 aa21.66■■□□□ 1.06
SLC52A1-202ENST00000424747 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
SLC52A1-202ENST00000424747 NLRP1Q9C000 1473 aa21.65■■□□□ 1.06
SLC52A1-202ENST00000424747 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
SLC52A1-202ENST00000424747 SEC24BO95487 1268 aa21.64■■□□□ 1.05
SLC52A1-202ENST00000424747 U2SURPO15042 1029 aaKnown RBP21.63■■□□□ 1.05
SLC52A1-202ENST00000424747 METP08581 1390 aa21.63■■□□□ 1.05
SLC52A1-202ENST00000424747 ANKRD26Q9UPS8 1709 aa21.63■■□□□ 1.05
SLC52A1-202ENST00000424747 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
SLC52A1-202ENST00000424747 MED14O60244 1454 aa21.62■■□□□ 1.05
SLC52A1-202ENST00000424747 TNRQ92752 1358 aa21.62■■□□□ 1.05
SLC52A1-202ENST00000424747 HDGFP51858 240 aaKnown RBP21.61■■□□□ 1.05
SLC52A1-202ENST00000424747 TXNDC2Q86VQ3 553 aa21.61■■□□□ 1.05
SLC52A1-202ENST00000424747 COL3A1P02461 1466 aaPredicted RBP21.61■■□□□ 1.05
SLC52A1-202ENST00000424747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.6■■□□□ 1.05
SLC52A1-202ENST00000424747 CT47B1P0C2W7 299 aaPredicted RBP21.59■■□□□ 1.05
SLC52A1-202ENST00000424747 IL27Q8NEV9 243 aa21.59■■□□□ 1.05
SLC52A1-202ENST00000424747 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
SLC52A1-202ENST00000424747 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
SLC52A1-202ENST00000424747 RWDD1Q9H446 243 aaPredicted RBP21.58■■□□□ 1.05
SLC52A1-202ENST00000424747 WASLO00401 505 aaPredicted RBP21.58■■□□□ 1.04
SLC52A1-202ENST00000424747 FRAT2O75474 233 aaPredicted RBP21.58■■□□□ 1.04
SLC52A1-202ENST00000424747 KIF20BQ96Q89 1820 aa21.58■■□□□ 1.04
SLC52A1-202ENST00000424747 ZKSCAN2Q63HK3 967 aa21.57■■□□□ 1.04
SLC52A1-202ENST00000424747 PLEKHF1Q96S99 279 aa21.57■■□□□ 1.04
SLC52A1-202ENST00000424747 ATP7BP35670 1465 aa21.56■■□□□ 1.04
SLC52A1-202ENST00000424747 BECN1Q14457 450 aa21.55■■□□□ 1.04
SLC52A1-202ENST00000424747 DIAPH1O60610 1272 aaKnown RBP21.55■■□□□ 1.04
SLC52A1-202ENST00000424747 DZIP1LQ8IYY4 767 aaKnown RBP21.55■■□□□ 1.04
SLC52A1-202ENST00000424747 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
SLC52A1-202ENST00000424747 TMEM2Q9UHN6 1383 aa21.54■■□□□ 1.04
SLC52A1-202ENST00000424747 TMPOP42166 694 aaKnown RBP21.54■■□□□ 1.04
SLC52A1-202ENST00000424747 FBLN1P23142 703 aa21.53■■□□□ 1.04
SLC52A1-202ENST00000424747 PPIP5K1Q6PFW1 1433 aa21.53■■□□□ 1.04
SLC52A1-202ENST00000424747 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
SLC52A1-202ENST00000424747 TRIM35Q9UPQ4 493 aa21.53■■□□□ 1.04
SLC52A1-202ENST00000424747 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.04
SLC52A1-202ENST00000424747 PNPLA6Q8IY17 1366 aa21.51■■□□□ 1.03
SLC52A1-202ENST00000424747 EXOSC9Q06265 439 aaKnown RBP21.51■■□□□ 1.03
SLC52A1-202ENST00000424747 NUDT16Q96DE0 195 aaKnown RBP21.51■■□□□ 1.03
SLC52A1-202ENST00000424747 UPF2Q9HAU5 1272 aaKnown RBP21.51■■□□□ 1.03
SLC52A1-202ENST00000424747 SIRT1Q96EB6 747 aa21.51■■□□□ 1.03
SLC52A1-202ENST00000424747 TBC1D32Q96NH3 1257 aa21.51■■□□□ 1.03
SLC52A1-202ENST00000424747 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
SLC52A1-202ENST00000424747 FAM135BQ49AJ0 1406 aa21.5■■□□□ 1.03
SLC52A1-202ENST00000424747 IL16Q14005 1332 aa21.5■■□□□ 1.03
SLC52A1-202ENST00000424747 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
SLC52A1-202ENST00000424747 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
SLC52A1-202ENST00000424747 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
SLC52A1-202ENST00000424747 CEBPAP49715 358 aaPredicted RBP21.49■■□□□ 1.03
SLC52A1-202ENST00000424747 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
SLC52A1-202ENST00000424747 TECPR2O15040 1411 aa21.48■■□□□ 1.03
SLC52A1-202ENST00000424747 TRIM27P14373 513 aa21.48■■□□□ 1.03
SLC52A1-202ENST00000424747 EDC4Q6P2E9 1401 aaKnown RBP21.48■■□□□ 1.03
SLC52A1-202ENST00000424747 NME9Q86XW9 330 aa21.47■■□□□ 1.03
SLC52A1-202ENST00000424747 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
SLC52A1-202ENST00000424747 CCDC61Q9Y6R9 512 aa21.47■■□□□ 1.03
SLC52A1-202ENST00000424747 PNNQ9H307 717 aaKnown RBP21.47■■□□□ 1.03
SLC52A1-202ENST00000424747 LTKP29376 864 aa21.46■■□□□ 1.03
SLC52A1-202ENST00000424747 RIPK4P57078 832 aa21.46■■□□□ 1.03
SLC52A1-202ENST00000424747 DDX19BQ9UMR2 479 aa21.46■■□□□ 1.03
SLC52A1-202ENST00000424747 CPS1P31327 1500 aa21.46■■□□□ 1.03
SLC52A1-202ENST00000424747 HDAC1Q13547 482 aaPredicted RBP21.46■■□□□ 1.03
SLC52A1-202ENST00000424747 ZRANB1Q9UGI0 708 aa21.46■■□□□ 1.03
SLC52A1-202ENST00000424747 CDC42BPGQ6DT37 1551 aa21.45■■□□□ 1.02
SLC52A1-202ENST00000424747 ATF7IPQ6VMQ6 1270 aa21.45■■□□□ 1.02
SLC52A1-202ENST00000424747 ADAMTS13Q76LX8 1427 aa21.45■■□□□ 1.02
SLC52A1-202ENST00000424747 ROBO2Q9HCK4 1378 aa21.45■■□□□ 1.02
SLC52A1-202ENST00000424747 BRPF3Q9ULD4 1205 aa21.45■■□□□ 1.02
SLC52A1-202ENST00000424747 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
SLC52A1-202ENST00000424747 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
SLC52A1-202ENST00000424747 FCHSD2O94868 740 aa21.44■■□□□ 1.02
SLC52A1-202ENST00000424747 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
SLC52A1-202ENST00000424747 EMILIN1Q9Y6C2 1016 aa21.43■■□□□ 1.02
SLC52A1-202ENST00000424747 ITPRIPQ8IWB1 547 aa21.43■■□□□ 1.02
SLC52A1-202ENST00000424747 SLKQ9H2G2 1235 aaPredicted RBP21.43■■□□□ 1.02
SLC52A1-202ENST00000424747 RTN4Q9NQC3 1192 aaKnown RBP21.42■■□□□ 1.02
SLC52A1-202ENST00000424747 NOB1Q9ULX3 412 aaKnown RBP21.42■■□□□ 1.02
SLC52A1-202ENST00000424747 PRR36Q9H6K5 1346 aa21.42■■□□□ 1.02
SLC52A1-202ENST00000424747 TBC1D2Q9BYX2 928 aa21.41■■□□□ 1.02
SLC52A1-202ENST00000424747 PLEKHG1Q9ULL1 1385 aa21.41■■□□□ 1.02
SLC52A1-202ENST00000424747 LRRC7Q96NW7 1537 aa21.41■■□□□ 1.02
SLC52A1-202ENST00000424747 PRKAR2BP31323 418 aa21.41■■□□□ 1.02
SLC52A1-202ENST00000424747 COG3Q96JB2 828 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms