RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 E9PCH4 1651 aa10.3□□□□□ -0.76
EPHA4-206ENST00000424339 C3P01024 1663 aa10.3□□□□□ -0.76
EPHA4-206ENST00000424339 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
EPHA4-206ENST00000424339 SPATA31D1Q6ZQQ2 1576 aa10.29□□□□□ -0.76
EPHA4-206ENST00000424339 PREX1Q8TCU6 1659 aa10.28□□□□□ -0.76
EPHA4-206ENST00000424339 NOS1P29475 1434 aa10.28□□□□□ -0.76
EPHA4-206ENST00000424339 ERVK-7P63135 1459 aa10.28□□□□□ -0.76
EPHA4-206ENST00000424339 CLSPNQ9HAW4 1339 aa10.28□□□□□ -0.76
EPHA4-206ENST00000424339 SPHKAPQ2M3C7 1700 aa10.27□□□□□ -0.76
EPHA4-206ENST00000424339 PTPRTO14522 1441 aa10.27□□□□□ -0.77
EPHA4-206ENST00000424339 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
EPHA4-206ENST00000424339 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-206ENST00000424339 SLC52A1Q9NWF4 448 aa10.27□□□□□ -0.77
EPHA4-206ENST00000424339 NLRP1Q9C000 1473 aa10.27□□□□□ -0.77
EPHA4-206ENST00000424339 ADAM33Q9BZ11 813 aa10.26□□□□□ -0.77
EPHA4-206ENST00000424339 TRPM2O94759 1503 aa10.26□□□□□ -0.77
EPHA4-206ENST00000424339 DHX57Q6P158 1386 aaKnown RBP10.26□□□□□ -0.77
EPHA4-206ENST00000424339 TNRQ92752 1358 aa10.26□□□□□ -0.77
EPHA4-206ENST00000424339 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
EPHA4-206ENST00000424339 EVI5O60447 810 aa10.25□□□□□ -0.77
EPHA4-206ENST00000424339 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-206ENST00000424339 PPP1R15BQ5SWA1 713 aa10.25□□□□□ -0.77
EPHA4-206ENST00000424339 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
EPHA4-206ENST00000424339 CFAP65Q6ZU64 1925 aaKnown RBP10.23□□□□□ -0.77
EPHA4-206ENST00000424339 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
EPHA4-206ENST00000424339 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
EPHA4-206ENST00000424339 ANKRD30BQ9BXX2 1392 aa10.23□□□□□ -0.77
EPHA4-206ENST00000424339 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
EPHA4-206ENST00000424339 RABGEF1Q9UJ41 708 aa10.22□□□□□ -0.77
EPHA4-206ENST00000424339 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
EPHA4-206ENST00000424339 SYNMO15061 1565 aa10.22□□□□□ -0.77
EPHA4-206ENST00000424339 MYO3AQ8NEV4 1616 aa10.22□□□□□ -0.77
EPHA4-206ENST00000424339 ZNF142P52746 1687 aaPredicted RBP10.22□□□□□ -0.77
EPHA4-206ENST00000424339 PDE4AP27815 886 aa10.21□□□□□ -0.77
EPHA4-206ENST00000424339 CEBPAP49715 358 aaPredicted RBP10.21□□□□□ -0.77
EPHA4-206ENST00000424339 FBXO31Q5XUX0 539 aaPredicted RBP10.21□□□□□ -0.77
EPHA4-206ENST00000424339 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.77
EPHA4-206ENST00000424339 A2ML1A8K2U0 1454 aa10.21□□□□□ -0.78
EPHA4-206ENST00000424339 KIF1BO60333 1816 aa10.2□□□□□ -0.78
EPHA4-206ENST00000424339 BCAMP50895 628 aa10.2□□□□□ -0.78
EPHA4-206ENST00000424339 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
EPHA4-206ENST00000424339 KCNC4Q03721 635 aa10.2□□□□□ -0.78
EPHA4-206ENST00000424339 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
EPHA4-206ENST00000424339 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
EPHA4-206ENST00000424339 CEP170BQ9Y4F5 1589 aaPredicted RBP10.2□□□□□ -0.78
EPHA4-206ENST00000424339 ADGRB3O60242 1522 aa10.19□□□□□ -0.78
EPHA4-206ENST00000424339 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
EPHA4-206ENST00000424339 CLTCL1P53675 1640 aa10.18□□□□□ -0.78
EPHA4-206ENST00000424339 UGGT1Q9NYU2 1555 aa10.18□□□□□ -0.78
EPHA4-206ENST00000424339 PPP1R3GB7ZBB8 358 aa10.18□□□□□ -0.78
EPHA4-206ENST00000424339 CHGAP10645 457 aaKnown RBP10.18□□□□□ -0.78
EPHA4-206ENST00000424339 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
EPHA4-206ENST00000424339 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
EPHA4-206ENST00000424339 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
EPHA4-206ENST00000424339 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
EPHA4-206ENST00000424339 IDI1Q13907 227 aa10.17□□□□□ -0.78
EPHA4-206ENST00000424339 LAPTM4BQ86VI4 370 aa10.17□□□□□ -0.78
EPHA4-206ENST00000424339 THEMISQ8N1K5 641 aaPredicted RBP10.17□□□□□ -0.78
EPHA4-206ENST00000424339 CCER1Q8TC90 406 aaPredicted RBP10.17□□□□□ -0.78
EPHA4-206ENST00000424339 UBR1Q8IWV7 1749 aa10.16□□□□□ -0.78
EPHA4-206ENST00000424339 RPGRIP1LQ68CZ1 1315 aa10.16□□□□□ -0.78
EPHA4-206ENST00000424339 TMEM131LA2VDJ0 1609 aa10.16□□□□□ -0.78
EPHA4-206ENST00000424339 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
EPHA4-206ENST00000424339 SPATA31E1Q6ZUB1 1445 aa10.15□□□□□ -0.79
EPHA4-206ENST00000424339 SLIT1O75093 1534 aa10.14□□□□□ -0.79
EPHA4-206ENST00000424339 GFRA3O60609 400 aa10.14□□□□□ -0.79
EPHA4-206ENST00000424339 TRAF7Q6Q0C0 670 aa10.14□□□□□ -0.79
EPHA4-206ENST00000424339 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
EPHA4-206ENST00000424339 KIAA1468Q9P260 1216 aa10.14□□□□□ -0.79
EPHA4-206ENST00000424339 LMTK3Q96Q04 1460 aa10.14□□□□□ -0.79
EPHA4-206ENST00000424339 ARHGAP23Q9P227 1491 aa10.13□□□□□ -0.79
EPHA4-206ENST00000424339 COL9A1P20849 921 aa10.13□□□□□ -0.79
EPHA4-206ENST00000424339 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.13□□□□□ -0.79
EPHA4-206ENST00000424339 ZFRQ96KR1 1074 aaKnown RBP10.13□□□□□ -0.79
EPHA4-206ENST00000424339 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
EPHA4-206ENST00000424339 PCDHGA10Q9Y5H3 936 aa10.12□□□□□ -0.79
EPHA4-206ENST00000424339 EID1Q9Y6B2 187 aa10.12□□□□□ -0.79
EPHA4-206ENST00000424339 ZFYVE9O95405 1425 aa10.12□□□□□ -0.79
EPHA4-206ENST00000424339 MYO5BQ9ULV0 1848 aa10.12□□□□□ -0.79
EPHA4-206ENST00000424339 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
EPHA4-206ENST00000424339 TONSLQ96HA7 1378 aa10.11□□□□□ -0.79
EPHA4-206ENST00000424339 NCKAP5LQ9HCH0 1330 aa10.1□□□□□ -0.79
EPHA4-206ENST00000424339 ZNF326Q5BKZ1 582 aaKnown RBP10.1□□□□□ -0.79
EPHA4-206ENST00000424339 PPLO60437 1756 aa10.1□□□□□ -0.79
EPHA4-206ENST00000424339 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
EPHA4-206ENST00000424339 MYOM2P54296 1465 aa10.1□□□□□ -0.79
EPHA4-206ENST00000424339 SCAF11Q99590 1463 aaKnown RBP10.1□□□□□ -0.79
EPHA4-206ENST00000424339 RIMS2Q9UQ26 1411 aa10.09□□□□□ -0.79
EPHA4-206ENST00000424339 NEXMIFQ5QGS0 1516 aa10.09□□□□□ -0.79
EPHA4-206ENST00000424339 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
EPHA4-206ENST00000424339 ANKLE2Q86XL3 938 aa10.09□□□□□ -0.79
EPHA4-206ENST00000424339 FBXW7Q969H0 707 aa10.09□□□□□ -0.79
EPHA4-206ENST00000424339 POLR1AO95602 1720 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-206ENST00000424339 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
EPHA4-206ENST00000424339 MED14O60244 1454 aa10.08□□□□□ -0.8
EPHA4-206ENST00000424339 PLEKHG1Q9ULL1 1385 aa10.07□□□□□ -0.8
EPHA4-206ENST00000424339 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
EPHA4-206ENST00000424339 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
EPHA4-206ENST00000424339 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
EPHA4-206ENST00000424339 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms