RNA–Protein interactions for RNA: ENST00000423160.2

SCN4B-203, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 2

Gene SCN4B, Length 3,969 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-203ENST00000423160 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
SCN4B-203ENST00000423160 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 ITPRIPQ8IWB1 547 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 TNPO1Q92973 898 aaKnown RBP13.79□□□□□ -0.2
SCN4B-203ENST00000423160 SNX21Q969T3 373 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 FANCAO15360 1455 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
SCN4B-203ENST00000423160 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
SCN4B-203ENST00000423160 TRIM44Q96DX7 344 aaPredicted RBP13.78□□□□□ -0.2
SCN4B-203ENST00000423160 LMTK2Q8IWU2 1503 aa13.78□□□□□ -0.2
SCN4B-203ENST00000423160 NUCB1Q02818 461 aa13.78□□□□□ -0.2
SCN4B-203ENST00000423160 ANKRD36BQ8N2N9 1353 aa13.77□□□□□ -0.2
SCN4B-203ENST00000423160 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.2
SCN4B-203ENST00000423160 ARHGEF28Q8N1W1 1705 aaKnown RBP13.77□□□□□ -0.2
SCN4B-203ENST00000423160 CFAP74Q9C0B2 1584 aa13.77□□□□□ -0.21
SCN4B-203ENST00000423160 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
SCN4B-203ENST00000423160 ESPNB1AK53 854 aa13.76□□□□□ -0.21
SCN4B-203ENST00000423160 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
SCN4B-203ENST00000423160 GLI2P10070 1586 aa13.76□□□□□ -0.21
SCN4B-203ENST00000423160 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
SCN4B-203ENST00000423160 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
SCN4B-203ENST00000423160 NSD2O96028 1365 aa13.76□□□□□ -0.21
SCN4B-203ENST00000423160 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
SCN4B-203ENST00000423160 HSP90AA2PQ14568 343 aaPredicted RBP13.75□□□□□ -0.21
SCN4B-203ENST00000423160 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
SCN4B-203ENST00000423160 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
SCN4B-203ENST00000423160 MED14O60244 1454 aa13.73□□□□□ -0.21
SCN4B-203ENST00000423160 NPATQ14207 1427 aa13.73□□□□□ -0.21
SCN4B-203ENST00000423160 CFAP65Q6ZU64 1925 aaKnown RBP13.73□□□□□ -0.21
SCN4B-203ENST00000423160 CHD1LQ86WJ1 897 aa13.73□□□□□ -0.21
SCN4B-203ENST00000423160 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
SCN4B-203ENST00000423160 IL16Q14005 1332 aa13.72□□□□□ -0.21
SCN4B-203ENST00000423160 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
SCN4B-203ENST00000423160 CAMSAP1Q5T5Y3 1602 aa13.72□□□□□ -0.21
SCN4B-203ENST00000423160 BMP2KLQ5H9B9 411 aa13.72□□□□□ -0.21
SCN4B-203ENST00000423160 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
SCN4B-203ENST00000423160 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
SCN4B-203ENST00000423160 A0A1W2PP64 1363 aa13.71□□□□□ -0.21
SCN4B-203ENST00000423160 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
SCN4B-203ENST00000423160 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
SCN4B-203ENST00000423160 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.22
SCN4B-203ENST00000423160 RRP9O43818 475 aaKnown RBP13.71□□□□□ -0.22
SCN4B-203ENST00000423160 ZBTB7CA1YPR0 619 aa13.7□□□□□ -0.22
SCN4B-203ENST00000423160 ANP32BQ92688 251 aaKnown RBP13.7□□□□□ -0.22
SCN4B-203ENST00000423160 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
SCN4B-203ENST00000423160 EVC2Q86UK5 1308 aa13.7□□□□□ -0.22
SCN4B-203ENST00000423160 HSP90AB1P08238 724 aaKnown RBP13.7□□□□□ -0.22
SCN4B-203ENST00000423160 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
SCN4B-203ENST00000423160 KIF16BQ96L93 1317 aa13.69□□□□□ -0.22
SCN4B-203ENST00000423160 RIPK4P57078 832 aa13.69□□□□□ -0.22
SCN4B-203ENST00000423160 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
SCN4B-203ENST00000423160 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
SCN4B-203ENST00000423160 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 SIGLEC1Q9BZZ2 1709 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 ZBTB7BO15156 539 aaPredicted RBP13.68□□□□□ -0.22
SCN4B-203ENST00000423160 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 CD163L1Q9NR16 1453 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 SSFA2P28290 1259 aa13.68□□□□□ -0.22
SCN4B-203ENST00000423160 NCLP19338 710 aaKnown RBP13.67□□□□□ -0.22
SCN4B-203ENST00000423160 ALDH1L2Q3SY69 923 aa13.67□□□□□ -0.22
SCN4B-203ENST00000423160 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
SCN4B-203ENST00000423160 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
SCN4B-203ENST00000423160 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
SCN4B-203ENST00000423160 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
SCN4B-203ENST00000423160 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
SCN4B-203ENST00000423160 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 PIK3C2BO00750 1634 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 AK9Q5TCS8 1911 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-203ENST00000423160 NUTM2DQ5VT03 806 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-203ENST00000423160 C1orf115Q9H7X2 142 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 LRRC7Q96NW7 1537 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 FYB1O15117 783 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 IPO8O15397 1037 aaKnown RBP13.66□□□□□ -0.22
SCN4B-203ENST00000423160 ANKRD45Q5TZF3 282 aa13.66□□□□□ -0.22
SCN4B-203ENST00000423160 RPGRIP1LQ68CZ1 1315 aa13.65□□□□□ -0.22
SCN4B-203ENST00000423160 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
SCN4B-203ENST00000423160 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.23
SCN4B-203ENST00000423160 SAFB2Q14151 953 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCN4B-203ENST00000423160 IBTKQ9P2D0 1353 aaPredicted RBP13.64□□□□□ -0.23
SCN4B-203ENST00000423160 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
SCN4B-203ENST00000423160 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
SCN4B-203ENST00000423160 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
SCN4B-203ENST00000423160 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
SCN4B-203ENST00000423160 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
SCN4B-203ENST00000423160 GSPT1P15170 499 aaKnown RBP13.63□□□□□ -0.23
SCN4B-203ENST00000423160 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
SCN4B-203ENST00000423160 CCDC173Q0VFZ6 552 aa13.63□□□□□ -0.23
SCN4B-203ENST00000423160 KLHL40Q2TBA0 621 aa13.63□□□□□ -0.23
SCN4B-203ENST00000423160 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
SCN4B-203ENST00000423160 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
SCN4B-203ENST00000423160 ABCC3O15438 1527 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms