RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 CDC42BPGQ6DT37 1551 aa11.82□□□□□ -0.52
SNX20-203ENST00000423026 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
SNX20-203ENST00000423026 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
SNX20-203ENST00000423026 PTPRUQ92729 1446 aa11.82□□□□□ -0.52
SNX20-203ENST00000423026 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
SNX20-203ENST00000423026 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
SNX20-203ENST00000423026 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.81□□□□□ -0.52
SNX20-203ENST00000423026 U2SURPO15042 1029 aaKnown RBP11.81□□□□□ -0.52
SNX20-203ENST00000423026 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
SNX20-203ENST00000423026 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
SNX20-203ENST00000423026 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
SNX20-203ENST00000423026 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
SNX20-203ENST00000423026 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 DIAPH1O60610 1272 aaKnown RBP11.8□□□□□ -0.52
SNX20-203ENST00000423026 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 TRMT2AQ8IZ69 625 aaKnown RBP11.8□□□□□ -0.52
SNX20-203ENST00000423026 MON2Q7Z3U7 1717 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 PIK3R4Q99570 1358 aa11.8□□□□□ -0.52
SNX20-203ENST00000423026 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
SNX20-203ENST00000423026 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
SNX20-203ENST00000423026 COG3Q96JB2 828 aa11.79□□□□□ -0.52
SNX20-203ENST00000423026 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
SNX20-203ENST00000423026 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
SNX20-203ENST00000423026 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
SNX20-203ENST00000423026 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
SNX20-203ENST00000423026 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
SNX20-203ENST00000423026 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
SNX20-203ENST00000423026 NME9Q86XW9 330 aa11.78□□□□□ -0.52
SNX20-203ENST00000423026 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
SNX20-203ENST00000423026 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
SNX20-203ENST00000423026 NKTRP30414 1462 aaKnown RBP11.78□□□□□ -0.52
SNX20-203ENST00000423026 MAPK8IP3Q9UPT6 1336 aa11.77□□□□□ -0.52
SNX20-203ENST00000423026 IQSEC2Q5JU85 1478 aa11.77□□□□□ -0.53
SNX20-203ENST00000423026 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
SNX20-203ENST00000423026 POLKQ9UBT6 870 aa11.77□□□□□ -0.53
SNX20-203ENST00000423026 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
SNX20-203ENST00000423026 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
SNX20-203ENST00000423026 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
SNX20-203ENST00000423026 ACEP12821 1306 aa11.76□□□□□ -0.53
SNX20-203ENST00000423026 NEFMP07197 916 aa11.76□□□□□ -0.53
SNX20-203ENST00000423026 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
SNX20-203ENST00000423026 TOPAZ1Q8N9V7 1692 aa11.76□□□□□ -0.53
SNX20-203ENST00000423026 AATKQ6ZMQ8 1374 aa11.76□□□□□ -0.53
SNX20-203ENST00000423026 EXOC6Q8TAG9 804 aa11.75□□□□□ -0.53
SNX20-203ENST00000423026 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
SNX20-203ENST00000423026 XRN1Q8IZH2 1706 aaKnown RBP11.75□□□□□ -0.53
SNX20-203ENST00000423026 PLIN1O60240 522 aa11.75□□□□□ -0.53
SNX20-203ENST00000423026 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
SNX20-203ENST00000423026 FCHSD2O94868 740 aa11.74□□□□□ -0.53
SNX20-203ENST00000423026 KCNA6P17658 529 aa11.74□□□□□ -0.53
SNX20-203ENST00000423026 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
SNX20-203ENST00000423026 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
SNX20-203ENST00000423026 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
SNX20-203ENST00000423026 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
SNX20-203ENST00000423026 USP6P35125 1406 aa11.73□□□□□ -0.53
SNX20-203ENST00000423026 FBLN1P23142 703 aa11.72□□□□□ -0.53
SNX20-203ENST00000423026 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
SNX20-203ENST00000423026 NGDNQ8NEJ9 315 aaKnown RBP11.72□□□□□ -0.53
SNX20-203ENST00000423026 CDK12Q9NYV4 1490 aaPredicted RBP11.72□□□□□ -0.53
SNX20-203ENST00000423026 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
SNX20-203ENST00000423026 CHD2O14647 1828 aaKnown RBP11.72□□□□□ -0.53
SNX20-203ENST00000423026 TTC21AQ8NDW8 1320 aa11.72□□□□□ -0.53
SNX20-203ENST00000423026 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.53
SNX20-203ENST00000423026 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
SNX20-203ENST00000423026 ANKARQ7Z5J8 1434 aa11.71□□□□□ -0.53
SNX20-203ENST00000423026 NRKQ7Z2Y5 1582 aa11.71□□□□□ -0.54
SNX20-203ENST00000423026 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.54
SNX20-203ENST00000423026 RGPD8O14715 1765 aaPredicted RBP11.7□□□□□ -0.54
SNX20-203ENST00000423026 DEKP35659 375 aaKnown RBP11.7□□□□□ -0.54
SNX20-203ENST00000423026 IL13P35225 146 aa11.69□□□□□ -0.54
SNX20-203ENST00000423026 RIPK4P57078 832 aa11.69□□□□□ -0.54
SNX20-203ENST00000423026 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
SNX20-203ENST00000423026 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
SNX20-203ENST00000423026 RSPH6AQ9H0K4 717 aa11.69□□□□□ -0.54
SNX20-203ENST00000423026 IL16Q14005 1332 aa11.68□□□□□ -0.54
SNX20-203ENST00000423026 OVOS2A0A0J9YW53 1432 aa11.68□□□□□ -0.54
SNX20-203ENST00000423026 NPHP4O75161 1426 aaPredicted RBP11.68□□□□□ -0.54
SNX20-203ENST00000423026 OVOS2Q6IE36 1432 aa11.68□□□□□ -0.54
SNX20-203ENST00000423026 BCAR3O75815 825 aa11.68□□□□□ -0.54
SNX20-203ENST00000423026 CANXP27824 592 aaKnown RBP11.68□□□□□ -0.54
SNX20-203ENST00000423026 FMN2Q9NZ56 1722 aa11.68□□□□□ -0.54
SNX20-203ENST00000423026 SSH2Q76I76 1423 aa11.68□□□□□ -0.54
SNX20-203ENST00000423026 HMOX1P09601 288 aa11.67□□□□□ -0.54
SNX20-203ENST00000423026 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
SNX20-203ENST00000423026 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
SNX20-203ENST00000423026 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
SNX20-203ENST00000423026 CT47B1P0C2W7 299 aaPredicted RBP11.67□□□□□ -0.54
SNX20-203ENST00000423026 USP31Q70CQ4 1352 aa11.66□□□□□ -0.54
SNX20-203ENST00000423026 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
SNX20-203ENST00000423026 RARSP54136 660 aaKnown RBP11.65□□□□□ -0.54
SNX20-203ENST00000423026 CALD1Q05682 793 aaKnown RBP11.65□□□□□ -0.54
SNX20-203ENST00000423026 PDE3AQ14432 1141 aa11.65□□□□□ -0.54
SNX20-203ENST00000423026 NFE2L2Q16236 605 aa11.65□□□□□ -0.54
SNX20-203ENST00000423026 LMOD3Q0VAK6 560 aa11.64□□□□□ -0.55
SNX20-203ENST00000423026 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
SNX20-203ENST00000423026 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
SNX20-203ENST00000423026 SOX12O15370 315 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms