RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 NBPF1Q3BBV0 1214 aa11.86□□□□□ -0.51
TRIM43CP-201ENST00000422468 NBPF8Q3BBV2 869 aa11.86□□□□□ -0.51
TRIM43CP-201ENST00000422468 PMFBP1Q8TBY8 1022 aa11.86□□□□□ -0.51
TRIM43CP-201ENST00000422468 L3MBTL2Q969R5 705 aa11.86□□□□□ -0.51
TRIM43CP-201ENST00000422468 BCL9LQ86UU0 1499 aa11.86□□□□□ -0.51
TRIM43CP-201ENST00000422468 ARHGEF10O15013 1369 aa11.85□□□□□ -0.51
TRIM43CP-201ENST00000422468 PRR36Q9H6K5 1346 aa11.85□□□□□ -0.51
TRIM43CP-201ENST00000422468 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
TRIM43CP-201ENST00000422468 PCGF6Q9BYE7 350 aa11.84□□□□□ -0.51
TRIM43CP-201ENST00000422468 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
TRIM43CP-201ENST00000422468 NWD2Q9ULI1 1742 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 SLIT2O94813 1529 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 POLA2Q14181 598 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 EP400Q96L91 3159 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 ATP7BP35670 1465 aa11.83□□□□□ -0.52
TRIM43CP-201ENST00000422468 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
TRIM43CP-201ENST00000422468 CABLES1Q8TDN4 633 aa11.82□□□□□ -0.52
TRIM43CP-201ENST00000422468 UNC5CLQ8IV45 518 aa11.81□□□□□ -0.52
TRIM43CP-201ENST00000422468 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
TRIM43CP-201ENST00000422468 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
TRIM43CP-201ENST00000422468 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 GLI3P10071 1580 aa11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 NGDNQ8NEJ9 315 aaKnown RBP11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 CDK19Q9BWU1 502 aa11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 QRICH2Q9H0J4 1663 aa11.8□□□□□ -0.52
TRIM43CP-201ENST00000422468 RALGAPBQ86X10 1494 aa11.79□□□□□ -0.52
TRIM43CP-201ENST00000422468 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
TRIM43CP-201ENST00000422468 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
TRIM43CP-201ENST00000422468 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
TRIM43CP-201ENST00000422468 NRAPQ86VF7 1730 aa11.77□□□□□ -0.52
TRIM43CP-201ENST00000422468 FAM83GA6ND36 823 aa11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 ABCB7O75027 752 aa11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 VPS72Q15906 364 aa11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 CENPJQ9HC77 1338 aaPredicted RBP11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.53
TRIM43CP-201ENST00000422468 PHRF1Q9P1Y6 1649 aaKnown RBP11.76□□□□□ -0.53
TRIM43CP-201ENST00000422468 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
TRIM43CP-201ENST00000422468 ACEP12821 1306 aa11.75□□□□□ -0.53
TRIM43CP-201ENST00000422468 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
TRIM43CP-201ENST00000422468 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
TRIM43CP-201ENST00000422468 PPIP5K1Q6PFW1 1433 aa11.73□□□□□ -0.53
TRIM43CP-201ENST00000422468 BTG4Q9NY30 223 aa11.73□□□□□ -0.53
TRIM43CP-201ENST00000422468 CCDC9Q9Y3X0 531 aaKnown RBP11.73□□□□□ -0.53
TRIM43CP-201ENST00000422468 ROCK2O75116 1388 aaKnown RBP11.72□□□□□ -0.53
TRIM43CP-201ENST00000422468 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
TRIM43CP-201ENST00000422468 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
TRIM43CP-201ENST00000422468 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
TRIM43CP-201ENST00000422468 SEPT12Q8IYM1 358 aa11.71□□□□□ -0.53
TRIM43CP-201ENST00000422468 NRKQ7Z2Y5 1582 aa11.71□□□□□ -0.54
TRIM43CP-201ENST00000422468 BRD4O60885 1362 aaPredicted RBP11.7□□□□□ -0.54
TRIM43CP-201ENST00000422468 KIAA0232Q92628 1395 aa11.7□□□□□ -0.54
TRIM43CP-201ENST00000422468 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
TRIM43CP-201ENST00000422468 ABTB2Q8N961 1025 aa11.7□□□□□ -0.54
TRIM43CP-201ENST00000422468 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
TRIM43CP-201ENST00000422468 NUTM2GQ5VZR2 741 aa11.69□□□□□ -0.54
TRIM43CP-201ENST00000422468 USP19O94966 1318 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 SPATA31A5Q5VU36 1347 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 SPATA31A7Q8IWB4 1347 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 KRT27Q7Z3Y8 459 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 USP6P35125 1406 aa11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
TRIM43CP-201ENST00000422468 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
TRIM43CP-201ENST00000422468 NLRP13Q86W25 1043 aa11.67□□□□□ -0.54
TRIM43CP-201ENST00000422468 THSD7AQ9UPZ6 1657 aa11.67□□□□□ -0.54
TRIM43CP-201ENST00000422468 CPDO75976 1380 aa11.67□□□□□ -0.54
TRIM43CP-201ENST00000422468 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
TRIM43CP-201ENST00000422468 LMO7Q8WWI1 1683 aa11.66□□□□□ -0.54
TRIM43CP-201ENST00000422468 A0A0G2JS52 829 aa11.66□□□□□ -0.54
TRIM43CP-201ENST00000422468 MYT1Q01538 1121 aa11.66□□□□□ -0.54
TRIM43CP-201ENST00000422468 PIK3C2AO00443 1686 aa11.65□□□□□ -0.54
TRIM43CP-201ENST00000422468 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
TRIM43CP-201ENST00000422468 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
TRIM43CP-201ENST00000422468 SBNO2Q9Y2G9 1366 aa11.65□□□□□ -0.55
TRIM43CP-201ENST00000422468 CAMTA1Q9Y6Y1 1673 aa11.65□□□□□ -0.55
TRIM43CP-201ENST00000422468 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 GCP02774 474 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 CARD11Q9BXL7 1154 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 SLIT3O75094 1523 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
TRIM43CP-201ENST00000422468 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 EVA1CP58658 441 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 NLRP6P59044 892 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 POTEHQ6S545 545 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 TESK2Q96S53 571 aa11.63□□□□□ -0.55
TRIM43CP-201ENST00000422468 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms