RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 KCNH2Q12809 1159 aa10.92□□□□□ -0.66
SFXN1-202ENST00000421887 SUZ12Q15022 739 aaKnown RBP10.91□□□□□ -0.66
SFXN1-202ENST00000421887 MAN1A2O60476 641 aa10.89□□□□□ -0.67
SFXN1-202ENST00000421887 PRR7Q8TB68 274 aa10.89□□□□□ -0.67
SFXN1-202ENST00000421887 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
SFXN1-202ENST00000421887 VSIG8P0DPA2 414 aa10.88□□□□□ -0.67
SFXN1-202ENST00000421887 NDUFV2P19404 249 aa10.88□□□□□ -0.67
SFXN1-202ENST00000421887 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
SFXN1-202ENST00000421887 C6orf118Q5T5N4 469 aa10.88□□□□□ -0.67
SFXN1-202ENST00000421887 MPNDQ8N594 471 aa10.87□□□□□ -0.67
SFXN1-202ENST00000421887 KCTD17Q8N5Z5 321 aa10.87□□□□□ -0.67
SFXN1-202ENST00000421887 CTHP32929 405 aa10.86□□□□□ -0.67
SFXN1-202ENST00000421887 ZIC2O95409 532 aaPredicted RBP10.85□□□□□ -0.67
SFXN1-202ENST00000421887 FAM174AQ8TBP5 190 aa10.85□□□□□ -0.67
SFXN1-202ENST00000421887 SPIRE2Q8WWL2 714 aa10.85□□□□□ -0.67
SFXN1-202ENST00000421887 MOXD2PA6NHM9 499 aa10.84□□□□□ -0.67
SFXN1-202ENST00000421887 KCNMA1Q12791 1236 aa10.84□□□□□ -0.67
SFXN1-202ENST00000421887 KLF16Q9BXK1 252 aaPredicted RBP10.84□□□□□ -0.67
SFXN1-202ENST00000421887 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
SFXN1-202ENST00000421887 PPFIA3O75145 1194 aa10.83□□□□□ -0.68
SFXN1-202ENST00000421887 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
SFXN1-202ENST00000421887 MTMR2Q13614 643 aa10.83□□□□□ -0.68
SFXN1-202ENST00000421887 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
SFXN1-202ENST00000421887 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
SFXN1-202ENST00000421887 BMP2P12643 396 aa10.81□□□□□ -0.68
SFXN1-202ENST00000421887 UPP2O95045 317 aa10.8□□□□□ -0.68
SFXN1-202ENST00000421887 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
SFXN1-202ENST00000421887 FOXJ1Q92949 421 aa10.8□□□□□ -0.68
SFXN1-202ENST00000421887 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
SFXN1-202ENST00000421887 AGERQ15109 404 aa10.79□□□□□ -0.68
SFXN1-202ENST00000421887 TMEM151AQ8N4L1 468 aa10.78□□□□□ -0.68
SFXN1-202ENST00000421887 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
SFXN1-202ENST00000421887 NR3C2P08235 984 aa10.77□□□□□ -0.69
SFXN1-202ENST00000421887 GSK3AP49840 483 aa10.77□□□□□ -0.69
SFXN1-202ENST00000421887 GDF11O95390 407 aa10.76□□□□□ -0.69
SFXN1-202ENST00000421887 NR5A1Q13285 461 aa10.76□□□□□ -0.69
SFXN1-202ENST00000421887 RASSF7Q02833 373 aa10.75□□□□□ -0.69
SFXN1-202ENST00000421887 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
SFXN1-202ENST00000421887 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
SFXN1-202ENST00000421887 LINC00528Q8N1L1 170 aa10.75□□□□□ -0.69
SFXN1-202ENST00000421887 MAP10Q9P2G4 905 aa10.75□□□□□ -0.69
SFXN1-202ENST00000421887 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
SFXN1-202ENST00000421887 CNTNAP3BQ96NU0 1288 aa10.74□□□□□ -0.69
SFXN1-202ENST00000421887 CNTNAP3Q9BZ76 1288 aa10.74□□□□□ -0.69
SFXN1-202ENST00000421887 NACADO15069 1562 aa10.73□□□□□ -0.69
SFXN1-202ENST00000421887 DNMT3LQ9UJW3 386 aa10.73□□□□□ -0.69
SFXN1-202ENST00000421887 GRM5P41594 1212 aa10.72□□□□□ -0.69
SFXN1-202ENST00000421887 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
SFXN1-202ENST00000421887 SPTLC1O15269 473 aa10.71□□□□□ -0.69
SFXN1-202ENST00000421887 KRT76Q01546 638 aa10.71□□□□□ -0.69
SFXN1-202ENST00000421887 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
SFXN1-202ENST00000421887 MEIOBQ8N635 442 aa10.71□□□□□ -0.69
SFXN1-202ENST00000421887 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
SFXN1-202ENST00000421887 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
SFXN1-202ENST00000421887 RNF225M0QZC1 329 aaPredicted RBP10.7□□□□□ -0.7
SFXN1-202ENST00000421887 C4orf48Q5BLP8 95 aa10.7□□□□□ -0.7
SFXN1-202ENST00000421887 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
SFXN1-202ENST00000421887 BPHLQ86WA6 291 aaPredicted RBP10.69□□□□□ -0.7
SFXN1-202ENST00000421887 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
SFXN1-202ENST00000421887 PCDHB15Q9Y5E8 787 aa10.69□□□□□ -0.7
SFXN1-202ENST00000421887 UNC13AQ9UPW8 1703 aa10.68□□□□□ -0.7
SFXN1-202ENST00000421887 F12P00748 615 aaPredicted RBP10.67□□□□□ -0.7
SFXN1-202ENST00000421887 FSHRP23945 695 aa10.67□□□□□ -0.7
SFXN1-202ENST00000421887 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
SFXN1-202ENST00000421887 TBC1D2Q9BYX2 928 aa10.67□□□□□ -0.7
SFXN1-202ENST00000421887 HRCP23327 699 aa10.66□□□□□ -0.7
SFXN1-202ENST00000421887 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.66□□□□□ -0.7
SFXN1-202ENST00000421887 RSBN1LQ6PCB5 846 aaPredicted RBP10.66□□□□□ -0.7
SFXN1-202ENST00000421887 TSC1Q92574 1164 aa10.66□□□□□ -0.7
SFXN1-202ENST00000421887 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
SFXN1-202ENST00000421887 COL25A1Q9BXS0 654 aaPredicted RBP10.66□□□□□ -0.7
SFXN1-202ENST00000421887 FIGNL2A6NMB9 653 aa10.65□□□□□ -0.7
SFXN1-202ENST00000421887 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
SFXN1-202ENST00000421887 PTSQ03393 145 aa10.65□□□□□ -0.7
SFXN1-202ENST00000421887 VASH1Q7L8A9 365 aaPredicted RBP10.65□□□□□ -0.7
SFXN1-202ENST00000421887 SVOPQ8N4V2 548 aa10.65□□□□□ -0.7
SFXN1-202ENST00000421887 ZBTB3Q9H5J0 574 aa10.65□□□□□ -0.7
SFXN1-202ENST00000421887 PER1O15534 1290 aaPredicted RBP10.63□□□□□ -0.71
SFXN1-202ENST00000421887 GJA5P36382 358 aa10.63□□□□□ -0.71
SFXN1-202ENST00000421887 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
SFXN1-202ENST00000421887 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
SFXN1-202ENST00000421887 GPAT2Q6NUI2 795 aa10.62□□□□□ -0.71
SFXN1-202ENST00000421887 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
SFXN1-202ENST00000421887 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
SFXN1-202ENST00000421887 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
SFXN1-202ENST00000421887 MAGEB6P1A0A0J9YX57 407 aa10.6□□□□□ -0.71
SFXN1-202ENST00000421887 IRS1P35568 1242 aa10.6□□□□□ -0.71
SFXN1-202ENST00000421887 AMHR2Q16671 573 aa10.6□□□□□ -0.71
SFXN1-202ENST00000421887 RNFT1Q5M7Z0 435 aa10.6□□□□□ -0.71
SFXN1-202ENST00000421887 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
SFXN1-202ENST00000421887 CCDC155Q8N6L0 562 aa10.59□□□□□ -0.71
SFXN1-202ENST00000421887 RIC3Q7Z5B4 369 aa10.58□□□□□ -0.72
SFXN1-202ENST00000421887 ARMC2Q8NEN0 867 aa10.58□□□□□ -0.72
SFXN1-202ENST00000421887 CDC14CA4D256 554 aa10.57□□□□□ -0.72
SFXN1-202ENST00000421887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.57□□□□□ -0.72
SFXN1-202ENST00000421887 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
SFXN1-202ENST00000421887 NANOS1Q8WY41 292 aaKnown RBP10.57□□□□□ -0.72
SFXN1-202ENST00000421887 C1QTNF2Q9BXJ5 285 aa10.57□□□□□ -0.72
SFXN1-202ENST00000421887 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
SFXN1-202ENST00000421887 MAP4K5Q9Y4K4 846 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms