RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.25■■■□□ 2.27
ABCF3-202ENST00000421340 FOXO3O43524 673 aa29.24■■■□□ 2.27
ABCF3-202ENST00000421340 BRINP3Q76B58 766 aa29.24■■■□□ 2.27
ABCF3-202ENST00000421340 MYBBP1AQ9BQG0 1328 aaKnown RBP29.23■■■□□ 2.27
ABCF3-202ENST00000421340 MORC1Q86VD1 984 aa29.23■■■□□ 2.27
ABCF3-202ENST00000421340 NRKQ7Z2Y5 1582 aa29.22■■■□□ 2.27
ABCF3-202ENST00000421340 NPHP3Q7Z494 1330 aa29.21■■■□□ 2.27
ABCF3-202ENST00000421340 CNGB1Q14028 1251 aaPredicted RBP29.2■■■□□ 2.26
ABCF3-202ENST00000421340 KRT28Q7Z3Y7 464 aa29.2■■■□□ 2.26
ABCF3-202ENST00000421340 GGNBP2Q9H3C7 697 aa29.2■■■□□ 2.26
ABCF3-202ENST00000421340 USP31Q70CQ4 1352 aa29.19■■■□□ 2.26
ABCF3-202ENST00000421340 NME9Q86XW9 330 aa29.19■■■□□ 2.26
ABCF3-202ENST00000421340 SCAF1Q9H7N4 1312 aaKnown RBP29.19■■■□□ 2.26
ABCF3-202ENST00000421340 TOM1O60784 492 aa29.17■■■□□ 2.26
ABCF3-202ENST00000421340 COG3Q96JB2 828 aa29.17■■■□□ 2.26
ABCF3-202ENST00000421340 NLRP13Q86W25 1043 aa29.16■■■□□ 2.26
ABCF3-202ENST00000421340 SBNO1A3KN83 1393 aa29.15■■■□□ 2.26
ABCF3-202ENST00000421340 PPP2R1AP30153 589 aa29.15■■■□□ 2.26
ABCF3-202ENST00000421340 CERKQ8TCT0 537 aa29.15■■■□□ 2.26
ABCF3-202ENST00000421340 KIF20BQ96Q89 1820 aa29.13■■■□□ 2.25
ABCF3-202ENST00000421340 PAK3O75914 559 aaPredicted RBP29.12■■■□□ 2.25
ABCF3-202ENST00000421340 ABTB2Q8N961 1025 aa29.12■■■□□ 2.25
ABCF3-202ENST00000421340 OVOS2A0A0J9YW53 1432 aa29.11■■■□□ 2.25
ABCF3-202ENST00000421340 OVOS2Q6IE36 1432 aa29.11■■■□□ 2.25
ABCF3-202ENST00000421340 SOS2Q07890 1332 aaPredicted RBP29.11■■■□□ 2.25
ABCF3-202ENST00000421340 ANKRD26Q9UPS8 1709 aa29.11■■■□□ 2.25
ABCF3-202ENST00000421340 PXDNQ92626 1479 aa29.1■■■□□ 2.25
ABCF3-202ENST00000421340 ZRANB1Q9UGI0 708 aa29.09■■■□□ 2.25
ABCF3-202ENST00000421340 AATKQ6ZMQ8 1374 aa29.09■■■□□ 2.25
ABCF3-202ENST00000421340 NLRP6P59044 892 aa29.08■■■□□ 2.25
ABCF3-202ENST00000421340 XPCQ01831 940 aaPredicted RBP29.07■■■□□ 2.24
ABCF3-202ENST00000421340 TRPM3Q9HCF6 1732 aaPredicted RBP29.06■■■□□ 2.24
ABCF3-202ENST00000421340 DDX17Q92841 729 aaKnown RBP29.06■■■□□ 2.24
ABCF3-202ENST00000421340 PIK3C2AO00443 1686 aa29.05■■■□□ 2.24
ABCF3-202ENST00000421340 USP54Q70EL1 1684 aa29.05■■■□□ 2.24
ABCF3-202ENST00000421340 SPATA31A3Q5VYP0 1347 aa29.04■■■□□ 2.24
ABCF3-202ENST00000421340 MRS2Q9HD23 443 aa29.04■■■□□ 2.24
ABCF3-202ENST00000421340 UBAP1LF5GYI3 381 aa29.03■■■□□ 2.24
ABCF3-202ENST00000421340 TNNT2P45379 298 aaPredicted RBP29.03■■■□□ 2.24
ABCF3-202ENST00000421340 TNS3Q68CZ2 1445 aa29.02■■■□□ 2.24
ABCF3-202ENST00000421340 ARHGEF10O15013 1369 aa29.01■■■□□ 2.24
ABCF3-202ENST00000421340 CCDC184Q52MB2 194 aa29.01■■■□□ 2.23
ABCF3-202ENST00000421340 NHSL1Q5SYE7 1610 aa29.01■■■□□ 2.23
ABCF3-202ENST00000421340 ROBO1Q9Y6N7 1651 aa28.99■■■□□ 2.23
ABCF3-202ENST00000421340 MTHFSP49914 203 aa28.99■■■□□ 2.23
ABCF3-202ENST00000421340 KCNH5Q8NCM2 988 aa28.99■■■□□ 2.23
ABCF3-202ENST00000421340 AHDC1Q5TGY3 1603 aaPredicted RBP28.98■■■□□ 2.23
ABCF3-202ENST00000421340 USP19O94966 1318 aa28.98■■■□□ 2.23
ABCF3-202ENST00000421340 POLKQ9UBT6 870 aa28.98■■■□□ 2.23
ABCF3-202ENST00000421340 ALS2Q96Q42 1657 aa28.97■■■□□ 2.23
ABCF3-202ENST00000421340 NUTM2GQ5VZR2 741 aa28.97■■■□□ 2.23
ABCF3-202ENST00000421340 INSRP06213 1382 aa28.96■■■□□ 2.23
ABCF3-202ENST00000421340 SMG6Q86US8 1419 aaKnown RBP28.95■■■□□ 2.23
ABCF3-202ENST00000421340 LMOD2Q6P5Q4 547 aa28.95■■■□□ 2.22
ABCF3-202ENST00000421340 LRRC59Q96AG4 307 aaKnown RBP28.95■■■□□ 2.22
ABCF3-202ENST00000421340 CFAP53Q96M91 514 aa28.95■■■□□ 2.22
ABCF3-202ENST00000421340 PNPLA6Q8IY17 1366 aa28.94■■■□□ 2.22
ABCF3-202ENST00000421340 PNISRQ8TF01 805 aaKnown RBP28.94■■■□□ 2.22
ABCF3-202ENST00000421340 KIF24Q5T7B8 1368 aa28.92■■■□□ 2.22
ABCF3-202ENST00000421340 PIP4K2BP78356 416 aa28.92■■■□□ 2.22
ABCF3-202ENST00000421340 SLIT3O75094 1523 aa28.92■■■□□ 2.22
ABCF3-202ENST00000421340 GCP02774 474 aa28.91■■■□□ 2.22
ABCF3-202ENST00000421340 MARF1Q9Y4F3 1742 aaKnown RBP28.91■■■□□ 2.22
ABCF3-202ENST00000421340 FBLN1P23142 703 aa28.9■■■□□ 2.22
ABCF3-202ENST00000421340 RRS1Q15050 365 aaKnown RBP28.88■■■□□ 2.21
ABCF3-202ENST00000421340 EMILIN1Q9Y6C2 1016 aa28.88■■■□□ 2.21
ABCF3-202ENST00000421340 MED1Q15648 1581 aaPredicted RBP28.88■■■□□ 2.21
ABCF3-202ENST00000421340 MAP3K19Q56UN5 1328 aa28.86■■■□□ 2.21
ABCF3-202ENST00000421340 CDK12Q9NYV4 1490 aaPredicted RBP28.85■■■□□ 2.21
ABCF3-202ENST00000421340 NFAT5O94916 1531 aa28.85■■■□□ 2.21
ABCF3-202ENST00000421340 ARHGEF25Q86VW2 580 aa28.83■■■□□ 2.21
ABCF3-202ENST00000421340 PPM1GO15355 546 aaPredicted RBP28.82■■■□□ 2.2
ABCF3-202ENST00000421340 SOX12O15370 315 aa28.82■■■□□ 2.2
ABCF3-202ENST00000421340 RTL1A6NKG5 1358 aa28.82■■■□□ 2.2
ABCF3-202ENST00000421340 MAP2P11137 1827 aaKnown RBP28.81■■■□□ 2.2
ABCF3-202ENST00000421340 COL3A1P02461 1466 aaPredicted RBP28.81■■■□□ 2.2
ABCF3-202ENST00000421340 FLT4P35916 1363 aa28.81■■■□□ 2.2
ABCF3-202ENST00000421340 NUDCQ9Y266 331 aa28.81■■■□□ 2.2
ABCF3-202ENST00000421340 DIAPH1O60610 1272 aaKnown RBP28.8■■■□□ 2.2
ABCF3-202ENST00000421340 AMPHP49418 695 aa28.8■■■□□ 2.2
ABCF3-202ENST00000421340 FAM9BQ8IZU0 186 aa28.8■■■□□ 2.2
ABCF3-202ENST00000421340 WDR43Q15061 677 aaKnown RBP eCLIP28.79■■■□□ 2.2
ABCF3-202ENST00000421340 COL16A1Q07092 1604 aaPredicted RBP28.79■■■□□ 2.2
ABCF3-202ENST00000421340 PHLPP1O60346 1717 aa28.78■■■□□ 2.2
ABCF3-202ENST00000421340 IP6K1Q92551 441 aa28.78■■■□□ 2.2
ABCF3-202ENST00000421340 CPDO75976 1380 aa28.77■■■□□ 2.2
ABCF3-202ENST00000421340 CABLES1Q8TDN4 633 aa28.77■■■□□ 2.2
ABCF3-202ENST00000421340 HOXC9P31274 260 aa28.76■■■□□ 2.19
ABCF3-202ENST00000421340 IL13P35225 146 aa28.76■■■□□ 2.19
ABCF3-202ENST00000421340 CRYBG1Q9Y4K1 1723 aa28.74■■■□□ 2.19
ABCF3-202ENST00000421340 PHRF1Q9P1Y6 1649 aaKnown RBP28.74■■■□□ 2.19
ABCF3-202ENST00000421340 HSP90AB2PQ58FF8 381 aa28.74■■■□□ 2.19
ABCF3-202ENST00000421340 ADAMTS8Q9UP79 889 aa28.74■■■□□ 2.19
ABCF3-202ENST00000421340 COL22A1Q8NFW1 1626 aaPredicted RBP28.73■■■□□ 2.19
ABCF3-202ENST00000421340 PEAK1Q9H792 1746 aa28.72■■■□□ 2.19
ABCF3-202ENST00000421340 ZC3H6P61129 1189 aaKnown RBP28.71■■■□□ 2.19
ABCF3-202ENST00000421340 ABCC6O95255 1503 aa28.7■■■□□ 2.19
ABCF3-202ENST00000421340 EIF4A2Q14240 407 aaKnown RBP28.7■■■□□ 2.18
ABCF3-202ENST00000421340 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
ABCF3-202ENST00000421340 PLEKHG5O94827 1062 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms