RNA–Protein interactions for RNA: ENST00000421003.5

LINC01341-202, Transcript of long intergenic non-protein coding RNA 1341, humanhuman

TSL 2 BASIC

Gene LINC01341, Length 2,600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01341-202ENST00000421003 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
LINC01341-202ENST00000421003 NUDT16Q96DE0 195 aaKnown RBP18.3■□□□□ 0.52
LINC01341-202ENST00000421003 PPIP5K1Q6PFW1 1433 aa18.3■□□□□ 0.52
LINC01341-202ENST00000421003 SLC26A8Q96RN1 970 aa18.29■□□□□ 0.52
LINC01341-202ENST00000421003 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
LINC01341-202ENST00000421003 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
LINC01341-202ENST00000421003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC01341-202ENST00000421003 WWC1Q8IX03 1113 aa18.27■□□□□ 0.52
LINC01341-202ENST00000421003 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
LINC01341-202ENST00000421003 KIF20BQ96Q89 1820 aa18.27■□□□□ 0.52
LINC01341-202ENST00000421003 E9PSI1 815 aa18.26■□□□□ 0.51
LINC01341-202ENST00000421003 TCP11L2Q8N4U5 519 aa18.26■□□□□ 0.51
LINC01341-202ENST00000421003 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
LINC01341-202ENST00000421003 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
LINC01341-202ENST00000421003 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
LINC01341-202ENST00000421003 NCKAP5LQ9HCH0 1330 aa18.26■□□□□ 0.51
LINC01341-202ENST00000421003 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
LINC01341-202ENST00000421003 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
LINC01341-202ENST00000421003 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
LINC01341-202ENST00000421003 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
LINC01341-202ENST00000421003 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
LINC01341-202ENST00000421003 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
LINC01341-202ENST00000421003 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
LINC01341-202ENST00000421003 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
LINC01341-202ENST00000421003 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
LINC01341-202ENST00000421003 ADGRB2O60241 1585 aa18.23■□□□□ 0.51
LINC01341-202ENST00000421003 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
LINC01341-202ENST00000421003 CDC42BPGQ6DT37 1551 aa18.23■□□□□ 0.51
LINC01341-202ENST00000421003 NKTRP30414 1462 aaKnown RBP18.23■□□□□ 0.51
LINC01341-202ENST00000421003 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
LINC01341-202ENST00000421003 PRR36Q9H6K5 1346 aa18.22■□□□□ 0.51
LINC01341-202ENST00000421003 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
LINC01341-202ENST00000421003 FBLN1P23142 703 aa18.21■□□□□ 0.51
LINC01341-202ENST00000421003 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
LINC01341-202ENST00000421003 PDE4AP27815 886 aa18.21■□□□□ 0.51
LINC01341-202ENST00000421003 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
LINC01341-202ENST00000421003 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
LINC01341-202ENST00000421003 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
LINC01341-202ENST00000421003 CRBNQ96SW2 442 aa18.2■□□□□ 0.5
LINC01341-202ENST00000421003 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
LINC01341-202ENST00000421003 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
LINC01341-202ENST00000421003 DIAPH1O60610 1272 aaKnown RBP18.19■□□□□ 0.5
LINC01341-202ENST00000421003 RIMS1Q86UR5 1692 aaKnown RBP18.19■□□□□ 0.5
LINC01341-202ENST00000421003 PTCH1Q13635 1447 aa18.19■□□□□ 0.5
LINC01341-202ENST00000421003 NME9Q86XW9 330 aa18.19■□□□□ 0.5
LINC01341-202ENST00000421003 WDR63Q8IWG1 891 aa18.19■□□□□ 0.5
LINC01341-202ENST00000421003 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
LINC01341-202ENST00000421003 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
LINC01341-202ENST00000421003 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
LINC01341-202ENST00000421003 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
LINC01341-202ENST00000421003 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
LINC01341-202ENST00000421003 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
LINC01341-202ENST00000421003 MON2Q7Z3U7 1717 aa18.17■□□□□ 0.5
LINC01341-202ENST00000421003 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
LINC01341-202ENST00000421003 COG3Q96JB2 828 aa18.17■□□□□ 0.5
LINC01341-202ENST00000421003 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
LINC01341-202ENST00000421003 AKAP12Q02952 1782 aa18.16■□□□□ 0.5
LINC01341-202ENST00000421003 BCAR3O75815 825 aa18.16■□□□□ 0.5
LINC01341-202ENST00000421003 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
LINC01341-202ENST00000421003 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
LINC01341-202ENST00000421003 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
LINC01341-202ENST00000421003 ACEP12821 1306 aa18.14■□□□□ 0.5
LINC01341-202ENST00000421003 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
LINC01341-202ENST00000421003 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
LINC01341-202ENST00000421003 BACH2Q9BYV9 841 aa18.14■□□□□ 0.49
LINC01341-202ENST00000421003 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
LINC01341-202ENST00000421003 SLC4A3P48751 1232 aa18.14■□□□□ 0.49
LINC01341-202ENST00000421003 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
LINC01341-202ENST00000421003 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
LINC01341-202ENST00000421003 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
LINC01341-202ENST00000421003 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
LINC01341-202ENST00000421003 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
LINC01341-202ENST00000421003 FCHSD2O94868 740 aa18.11■□□□□ 0.49
LINC01341-202ENST00000421003 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
LINC01341-202ENST00000421003 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
LINC01341-202ENST00000421003 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
LINC01341-202ENST00000421003 TTC21BQ7Z4L5 1316 aa18.11■□□□□ 0.49
LINC01341-202ENST00000421003 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
LINC01341-202ENST00000421003 KCNA6P17658 529 aa18.1■□□□□ 0.49
LINC01341-202ENST00000421003 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
LINC01341-202ENST00000421003 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
LINC01341-202ENST00000421003 USP6P35125 1406 aa18.09■□□□□ 0.49
LINC01341-202ENST00000421003 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
LINC01341-202ENST00000421003 ZNF142P52746 1687 aaPredicted RBP18.08■□□□□ 0.49
LINC01341-202ENST00000421003 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
LINC01341-202ENST00000421003 GSE1Q14687 1217 aa18.07■□□□□ 0.48
LINC01341-202ENST00000421003 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
LINC01341-202ENST00000421003 IL13P35225 146 aa18.06■□□□□ 0.48
LINC01341-202ENST00000421003 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
LINC01341-202ENST00000421003 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
LINC01341-202ENST00000421003 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
LINC01341-202ENST00000421003 LRRC7Q96NW7 1537 aa18.05■□□□□ 0.48
LINC01341-202ENST00000421003 RARSP54136 660 aaKnown RBP18.05■□□□□ 0.48
LINC01341-202ENST00000421003 RIPK4P57078 832 aa18.05■□□□□ 0.48
LINC01341-202ENST00000421003 PMFBP1Q8TBY8 1022 aa18.05■□□□□ 0.48
LINC01341-202ENST00000421003 SETD1BQ9UPS6 1966 aaKnown RBP18.05■□□□□ 0.48
LINC01341-202ENST00000421003 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
LINC01341-202ENST00000421003 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
LINC01341-202ENST00000421003 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
LINC01341-202ENST00000421003 SSH2Q76I76 1423 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms