RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 A0A1W2PP64 1363 aa28.15■■■□□ 2.1
EGFR-204ENST00000420316 ARHGEF10O15013 1369 aa28.15■■■□□ 2.1
EGFR-204ENST00000420316 WASHC2AQ641Q2 1341 aa28.14■■■□□ 2.1
EGFR-204ENST00000420316 KTN1Q86UP2 1357 aaKnown RBP28.14■■■□□ 2.1
EGFR-204ENST00000420316 USP6P35125 1406 aa28.14■■■□□ 2.1
EGFR-204ENST00000420316 HDGFL2Q7Z4V5 671 aaPredicted RBP28.13■■■□□ 2.09
EGFR-204ENST00000420316 TERF2IPQ9NYB0 399 aa28.13■■■□□ 2.09
EGFR-204ENST00000420316 MON2Q7Z3U7 1717 aa28.13■■■□□ 2.09
EGFR-204ENST00000420316 CCDC7Q96M83 1385 aa28.13■■■□□ 2.09
EGFR-204ENST00000420316 NUTM2GQ5VZR2 741 aa28.12■■■□□ 2.09
EGFR-204ENST00000420316 ALS2Q96Q42 1657 aa28.1■■■□□ 2.09
EGFR-204ENST00000420316 SSH2Q76I76 1423 aa28.1■■■□□ 2.09
EGFR-204ENST00000420316 COL22A1Q8NFW1 1626 aaPredicted RBP28.09■■■□□ 2.09
EGFR-204ENST00000420316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.09■■■□□ 2.09
EGFR-204ENST00000420316 NRKQ7Z2Y5 1582 aa28.09■■■□□ 2.09
EGFR-204ENST00000420316 NUTM2BA6NNL0 878 aaPredicted RBP28.08■■■□□ 2.09
EGFR-204ENST00000420316 NUTM2EB1AL46 878 aaPredicted RBP28.08■■■□□ 2.09
EGFR-204ENST00000420316 NUTM2AQ8IVF1 878 aaPredicted RBP28.08■■■□□ 2.09
EGFR-204ENST00000420316 ANKRD36BQ8N2N9 1353 aa28.08■■■□□ 2.09
EGFR-204ENST00000420316 TTC21BQ7Z4L5 1316 aa28.07■■■□□ 2.08
EGFR-204ENST00000420316 ABTB2Q8N961 1025 aa28.07■■■□□ 2.08
EGFR-204ENST00000420316 CABLES1Q8TDN4 633 aa28.06■■■□□ 2.08
EGFR-204ENST00000420316 CARD14Q9BXL6 1004 aa28.05■■■□□ 2.08
EGFR-204ENST00000420316 TTC21AQ8NDW8 1320 aa28.04■■■□□ 2.08
EGFR-204ENST00000420316 LRP6O75581 1613 aa28.04■■■□□ 2.08
EGFR-204ENST00000420316 PANK3Q9H999 370 aa28.04■■■□□ 2.08
EGFR-204ENST00000420316 ZRANB1Q9UGI0 708 aa28.04■■■□□ 2.08
EGFR-204ENST00000420316 MED1Q15648 1581 aaPredicted RBP28.04■■■□□ 2.08
EGFR-204ENST00000420316 PIK3C2AO00443 1686 aa28.03■■■□□ 2.08
EGFR-204ENST00000420316 NME9Q86XW9 330 aa28.02■■■□□ 2.08
EGFR-204ENST00000420316 EDC4Q6P2E9 1401 aaKnown RBP28.02■■■□□ 2.08
EGFR-204ENST00000420316 MEX3CQ5U5Q3 659 aaKnown RBP28.01■■■□□ 2.07
EGFR-204ENST00000420316 NLRP13Q86W25 1043 aa28.01■■■□□ 2.07
EGFR-204ENST00000420316 NSD3Q9BZ95 1437 aa28■■■□□ 2.07
EGFR-204ENST00000420316 HAP1P54257 671 aaPredicted RBP27.99■■■□□ 2.07
EGFR-204ENST00000420316 ADAMTS2O95450 1211 aa27.98■■■□□ 2.07
EGFR-204ENST00000420316 NLRP6P59044 892 aa27.98■■■□□ 2.07
EGFR-204ENST00000420316 ABCA3Q99758 1704 aa27.97■■■□□ 2.07
EGFR-204ENST00000420316 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.07
EGFR-204ENST00000420316 USP19O94966 1318 aa27.95■■■□□ 2.06
EGFR-204ENST00000420316 CRYBG1Q9Y4K1 1723 aa27.95■■■□□ 2.06
EGFR-204ENST00000420316 PHF23Q9BUL5 403 aaPredicted RBP27.94■■■□□ 2.06
EGFR-204ENST00000420316 SOX12O15370 315 aa27.93■■■□□ 2.06
EGFR-204ENST00000420316 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
EGFR-204ENST00000420316 PHRF1Q9P1Y6 1649 aaKnown RBP27.93■■■□□ 2.06
EGFR-204ENST00000420316 KIF20BQ96Q89 1820 aa27.92■■■□□ 2.06
EGFR-204ENST00000420316 C8orf37Q96NL8 207 aa27.92■■■□□ 2.06
EGFR-204ENST00000420316 USP31Q70CQ4 1352 aa27.92■■■□□ 2.06
EGFR-204ENST00000420316 NGLY1Q96IV0 654 aa27.91■■■□□ 2.06
EGFR-204ENST00000420316 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
EGFR-204ENST00000420316 FYB1O15117 783 aa27.9■■■□□ 2.06
EGFR-204ENST00000420316 GCP02774 474 aa27.9■■■□□ 2.06
EGFR-204ENST00000420316 CNGB1Q14028 1251 aaPredicted RBP27.9■■■□□ 2.06
EGFR-204ENST00000420316 DDX10Q13206 875 aaKnown RBP27.87■■■□□ 2.05
EGFR-204ENST00000420316 FNBP4Q8N3X1 1017 aaPredicted RBP27.87■■■□□ 2.05
EGFR-204ENST00000420316 ZC3H6P61129 1189 aaKnown RBP27.86■■■□□ 2.05
EGFR-204ENST00000420316 RGS17Q9UGC6 210 aaPredicted RBP27.86■■■□□ 2.05
EGFR-204ENST00000420316 AFF2P51816 1311 aa27.86■■■□□ 2.05
EGFR-204ENST00000420316 KCNH5Q8NCM2 988 aa27.86■■■□□ 2.05
EGFR-204ENST00000420316 ZBTB7CA1YPR0 619 aa27.85■■■□□ 2.05
EGFR-204ENST00000420316 FAM83GA6ND36 823 aa27.85■■■□□ 2.05
EGFR-204ENST00000420316 SLIT3O75094 1523 aa27.84■■■□□ 2.05
EGFR-204ENST00000420316 OVOS2A0A0J9YW53 1432 aa27.84■■■□□ 2.05
EGFR-204ENST00000420316 OVOS2Q6IE36 1432 aa27.84■■■□□ 2.05
EGFR-204ENST00000420316 FBLN1P23142 703 aa27.84■■■□□ 2.05
EGFR-204ENST00000420316 ZNF772Q68DY9 489 aaPredicted RBP27.84■■■□□ 2.05
EGFR-204ENST00000420316 KNSTRNQ9Y448 316 aa27.84■■■□□ 2.05
EGFR-204ENST00000420316 CGNL1Q0VF96 1302 aa27.83■■■□□ 2.05
EGFR-204ENST00000420316 PER1O15534 1290 aaPredicted RBP27.83■■■□□ 2.05
EGFR-204ENST00000420316 COG3Q96JB2 828 aa27.83■■■□□ 2.05
EGFR-204ENST00000420316 USP54Q70EL1 1684 aa27.83■■■□□ 2.05
EGFR-204ENST00000420316 CPDO75976 1380 aa27.82■■■□□ 2.04
EGFR-204ENST00000420316 KIAA0232Q92628 1395 aa27.82■■■□□ 2.04
EGFR-204ENST00000420316 PRDM11Q9NQV5 511 aa27.82■■■□□ 2.04
EGFR-204ENST00000420316 CHRNA2Q15822 529 aa27.8■■■□□ 2.04
EGFR-204ENST00000420316 USP21Q9UK80 565 aa27.8■■■□□ 2.04
EGFR-204ENST00000420316 SLIT2O94813 1529 aa27.78■■■□□ 2.04
EGFR-204ENST00000420316 AMER1Q5JTC6 1135 aaPredicted RBP27.77■■■□□ 2.04
EGFR-204ENST00000420316 CC2D1BQ5T0F9 858 aaKnown RBP27.77■■■□□ 2.04
EGFR-204ENST00000420316 NFAT5O94916 1531 aa27.77■■■□□ 2.04
EGFR-204ENST00000420316 TNNT2P45379 298 aaPredicted RBP27.77■■■□□ 2.04
EGFR-204ENST00000420316 ANKRD26Q9UPS8 1709 aa27.76■■■□□ 2.03
EGFR-204ENST00000420316 BCL9LQ86UU0 1499 aa27.76■■■□□ 2.03
EGFR-204ENST00000420316 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.03
EGFR-204ENST00000420316 UNC5CLQ8IV45 518 aa27.75■■■□□ 2.03
EGFR-204ENST00000420316 POTEAQ6S8J7 498 aa27.74■■■□□ 2.03
EGFR-204ENST00000420316 BTG4Q9NY30 223 aa27.74■■■□□ 2.03
EGFR-204ENST00000420316 COL14A1Q05707 1796 aaKnown RBP27.73■■■□□ 2.03
EGFR-204ENST00000420316 PLCH1Q4KWH8 1693 aa27.73■■■□□ 2.03
EGFR-204ENST00000420316 QTRT2Q9H974 415 aaKnown RBP27.73■■■□□ 2.03
EGFR-204ENST00000420316 LTN1O94822 1766 aa27.73■■■□□ 2.03
EGFR-204ENST00000420316 TRPC5Q9UL62 973 aaPredicted RBP27.72■■■□□ 2.03
EGFR-204ENST00000420316 AATKQ6ZMQ8 1374 aa27.71■■■□□ 2.03
EGFR-204ENST00000420316 RRS1Q15050 365 aaKnown RBP27.71■■■□□ 2.03
EGFR-204ENST00000420316 MORC1Q86VD1 984 aa27.7■■■□□ 2.03
EGFR-204ENST00000420316 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
EGFR-204ENST00000420316 NSD2O96028 1365 aa27.68■■■□□ 2.02
EGFR-204ENST00000420316 NWD2Q9ULI1 1742 aa27.68■■■□□ 2.02
EGFR-204ENST00000420316 ATRNO75882 1429 aa27.67■■■□□ 2.02
EGFR-204ENST00000420316 COL18A1P39060 1754 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms