RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TCP11L2Q8N4U5 519 aa18.94■□□□□ 0.62
HLA-DPA1-242ENST00000419277 CCDC61Q9Y6R9 512 aa18.94■□□□□ 0.62
HLA-DPA1-242ENST00000419277 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
HLA-DPA1-242ENST00000419277 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
HLA-DPA1-242ENST00000419277 IL16Q14005 1332 aa18.93■□□□□ 0.62
HLA-DPA1-242ENST00000419277 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
HLA-DPA1-242ENST00000419277 PIK3R4Q99570 1358 aa18.92■□□□□ 0.62
HLA-DPA1-242ENST00000419277 TCERG1O14776 1098 aaKnown RBP18.92■□□□□ 0.62
HLA-DPA1-242ENST00000419277 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
HLA-DPA1-242ENST00000419277 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
HLA-DPA1-242ENST00000419277 PDE3AQ14432 1141 aa18.92■□□□□ 0.62
HLA-DPA1-242ENST00000419277 GGNBP2Q9H3C7 697 aa18.92■□□□□ 0.62
HLA-DPA1-242ENST00000419277 MS4A1P11836 297 aa18.91■□□□□ 0.62
HLA-DPA1-242ENST00000419277 WAPLQ7Z5K2 1190 aa18.91■□□□□ 0.62
HLA-DPA1-242ENST00000419277 ZNF142P52746 1687 aaPredicted RBP18.91■□□□□ 0.62
HLA-DPA1-242ENST00000419277 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
HLA-DPA1-242ENST00000419277 XRN1Q8IZH2 1706 aaKnown RBP18.9■□□□□ 0.62
HLA-DPA1-242ENST00000419277 DIAPH1O60610 1272 aaKnown RBP18.9■□□□□ 0.62
HLA-DPA1-242ENST00000419277 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
HLA-DPA1-242ENST00000419277 NALCNQ8IZF0 1738 aa18.89■□□□□ 0.61
HLA-DPA1-242ENST00000419277 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.89■□□□□ 0.61
HLA-DPA1-242ENST00000419277 TBX22Q9Y458 520 aa18.88■□□□□ 0.61
HLA-DPA1-242ENST00000419277 CEP170BQ9Y4F5 1589 aaPredicted RBP18.88■□□□□ 0.61
HLA-DPA1-242ENST00000419277 FCHSD2O94868 740 aa18.88■□□□□ 0.61
HLA-DPA1-242ENST00000419277 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
HLA-DPA1-242ENST00000419277 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
HLA-DPA1-242ENST00000419277 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
HLA-DPA1-242ENST00000419277 NEFMP07197 916 aa18.87■□□□□ 0.61
HLA-DPA1-242ENST00000419277 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
HLA-DPA1-242ENST00000419277 LRRC7Q96NW7 1537 aa18.87■□□□□ 0.61
HLA-DPA1-242ENST00000419277 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
HLA-DPA1-242ENST00000419277 PLEKHF1Q96S99 279 aa18.86■□□□□ 0.61
HLA-DPA1-242ENST00000419277 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
HLA-DPA1-242ENST00000419277 PLIN1O60240 522 aa18.83■□□□□ 0.61
HLA-DPA1-242ENST00000419277 COG3Q96JB2 828 aa18.83■□□□□ 0.61
HLA-DPA1-242ENST00000419277 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.6
HLA-DPA1-242ENST00000419277 PLEKHG3A1L390 1219 aa18.83■□□□□ 0.6
HLA-DPA1-242ENST00000419277 LTKP29376 864 aa18.83■□□□□ 0.6
HLA-DPA1-242ENST00000419277 CALD1Q05682 793 aaKnown RBP18.83■□□□□ 0.6
HLA-DPA1-242ENST00000419277 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
HLA-DPA1-242ENST00000419277 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
HLA-DPA1-242ENST00000419277 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
HLA-DPA1-242ENST00000419277 ZNF428Q96B54 188 aa18.81■□□□□ 0.6
HLA-DPA1-242ENST00000419277 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
HLA-DPA1-242ENST00000419277 USP54Q70EL1 1684 aa18.81■□□□□ 0.6
HLA-DPA1-242ENST00000419277 OVOS2A0A0J9YW53 1432 aa18.8■□□□□ 0.6
HLA-DPA1-242ENST00000419277 USP6P35125 1406 aa18.8■□□□□ 0.6
HLA-DPA1-242ENST00000419277 OVOS2Q6IE36 1432 aa18.8■□□□□ 0.6
HLA-DPA1-242ENST00000419277 TTC21AQ8NDW8 1320 aa18.79■□□□□ 0.6
HLA-DPA1-242ENST00000419277 SETD1BQ9UPS6 1966 aaKnown RBP18.79■□□□□ 0.6
HLA-DPA1-242ENST00000419277 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
HLA-DPA1-242ENST00000419277 CANXP27824 592 aaKnown RBP18.78■□□□□ 0.6
HLA-DPA1-242ENST00000419277 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
HLA-DPA1-242ENST00000419277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
HLA-DPA1-242ENST00000419277 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
HLA-DPA1-242ENST00000419277 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
HLA-DPA1-242ENST00000419277 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
HLA-DPA1-242ENST00000419277 ADAMTSL3P82987 1691 aa18.77■□□□□ 0.6
HLA-DPA1-242ENST00000419277 NEUROD2Q15784 382 aa18.77■□□□□ 0.59
HLA-DPA1-242ENST00000419277 C20orf194Q5TEA3 1177 aa18.77■□□□□ 0.59
HLA-DPA1-242ENST00000419277 PRR36Q9H6K5 1346 aa18.76■□□□□ 0.59
HLA-DPA1-242ENST00000419277 FMN2Q9NZ56 1722 aa18.76■□□□□ 0.59
HLA-DPA1-242ENST00000419277 RSPH6AQ9H0K4 717 aa18.76■□□□□ 0.59
HLA-DPA1-242ENST00000419277 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
HLA-DPA1-242ENST00000419277 USP31Q70CQ4 1352 aa18.76■□□□□ 0.59
HLA-DPA1-242ENST00000419277 SSH2Q76I76 1423 aa18.76■□□□□ 0.59
HLA-DPA1-242ENST00000419277 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
HLA-DPA1-242ENST00000419277 BCAR3O75815 825 aa18.74■□□□□ 0.59
HLA-DPA1-242ENST00000419277 CHD2O14647 1828 aaKnown RBP18.73■□□□□ 0.59
HLA-DPA1-242ENST00000419277 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
HLA-DPA1-242ENST00000419277 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
HLA-DPA1-242ENST00000419277 TRIM35Q9UPQ4 493 aa18.73■□□□□ 0.59
HLA-DPA1-242ENST00000419277 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
HLA-DPA1-242ENST00000419277 RGPD1P0DJD0 1748 aa18.72■□□□□ 0.59
HLA-DPA1-242ENST00000419277 CEBPAP49715 358 aaPredicted RBP18.72■□□□□ 0.59
HLA-DPA1-242ENST00000419277 RIPK4P57078 832 aa18.72■□□□□ 0.59
HLA-DPA1-242ENST00000419277 NME9Q86XW9 330 aa18.72■□□□□ 0.59
HLA-DPA1-242ENST00000419277 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
HLA-DPA1-242ENST00000419277 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
HLA-DPA1-242ENST00000419277 IL13P35225 146 aa18.71■□□□□ 0.59
HLA-DPA1-242ENST00000419277 ACEP12821 1306 aa18.71■□□□□ 0.59
HLA-DPA1-242ENST00000419277 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
HLA-DPA1-242ENST00000419277 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
HLA-DPA1-242ENST00000419277 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
HLA-DPA1-242ENST00000419277 PMFBP1Q8TBY8 1022 aa18.7■□□□□ 0.58
HLA-DPA1-242ENST00000419277 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
HLA-DPA1-242ENST00000419277 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
HLA-DPA1-242ENST00000419277 PRKAR2BP31323 418 aa18.69■□□□□ 0.58
HLA-DPA1-242ENST00000419277 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
HLA-DPA1-242ENST00000419277 ZKSCAN2Q63HK3 967 aa18.69■□□□□ 0.58
HLA-DPA1-242ENST00000419277 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
HLA-DPA1-242ENST00000419277 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
HLA-DPA1-242ENST00000419277 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
HLA-DPA1-242ENST00000419277 BACH2Q9BYV9 841 aa18.67■□□□□ 0.58
HLA-DPA1-242ENST00000419277 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
HLA-DPA1-242ENST00000419277 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
HLA-DPA1-242ENST00000419277 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
HLA-DPA1-242ENST00000419277 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
HLA-DPA1-242ENST00000419277 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
HLA-DPA1-242ENST00000419277 GNAI1P63096 354 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms