RNA–Protein interactions for RNA: ENST00000419068.1

UCHL3-202, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5

Gene UCHL3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-202ENST00000419068 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
UCHL3-202ENST00000419068 GMPRP36959 345 aa10.28□□□□□ -0.76
UCHL3-202ENST00000419068 NNTQ13423 1086 aa10.28□□□□□ -0.76
UCHL3-202ENST00000419068 FOXJ1Q92949 421 aa10.28□□□□□ -0.76
UCHL3-202ENST00000419068 SOBPA7XYQ1 873 aa10.27□□□□□ -0.77
UCHL3-202ENST00000419068 CTHP32929 405 aa10.27□□□□□ -0.77
UCHL3-202ENST00000419068 CABLES1Q8TDN4 633 aa10.27□□□□□ -0.77
UCHL3-202ENST00000419068 HRCP23327 699 aa10.26□□□□□ -0.77
UCHL3-202ENST00000419068 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
UCHL3-202ENST00000419068 LYPD8Q6UX82 237 aa10.26□□□□□ -0.77
UCHL3-202ENST00000419068 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
UCHL3-202ENST00000419068 LOC100996750A0A140TA64 210 aa10.25□□□□□ -0.77
UCHL3-202ENST00000419068 TIMP2P16035 220 aa10.25□□□□□ -0.77
UCHL3-202ENST00000419068 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
UCHL3-202ENST00000419068 VARSP26640 1264 aaKnown RBP10.25□□□□□ -0.77
UCHL3-202ENST00000419068 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
UCHL3-202ENST00000419068 KRTAP4-6Q9BYQ5 205 aa10.25□□□□□ -0.77
UCHL3-202ENST00000419068 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
UCHL3-202ENST00000419068 TRIM66O15016 1216 aa10.24□□□□□ -0.77
UCHL3-202ENST00000419068 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
UCHL3-202ENST00000419068 WDR4P57081 412 aaKnown RBP10.24□□□□□ -0.77
UCHL3-202ENST00000419068 PURBQ96QR8 312 aaKnown RBP10.24□□□□□ -0.77
UCHL3-202ENST00000419068 SPTLC1O15269 473 aa10.23□□□□□ -0.77
UCHL3-202ENST00000419068 C4orf48Q5BLP8 95 aa10.23□□□□□ -0.77
UCHL3-202ENST00000419068 KLF16Q9BXK1 252 aaPredicted RBP10.23□□□□□ -0.77
UCHL3-202ENST00000419068 F12P00748 615 aaPredicted RBP10.22□□□□□ -0.77
UCHL3-202ENST00000419068 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
UCHL3-202ENST00000419068 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
UCHL3-202ENST00000419068 ZFAND3Q9H8U3 227 aa10.22□□□□□ -0.77
UCHL3-202ENST00000419068 H3BM21 787 aa10.21□□□□□ -0.77
UCHL3-202ENST00000419068 ARID5BQ14865 1188 aa10.21□□□□□ -0.77
UCHL3-202ENST00000419068 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.77
UCHL3-202ENST00000419068 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
UCHL3-202ENST00000419068 NR3C2P08235 984 aa10.2□□□□□ -0.78
UCHL3-202ENST00000419068 QPCTQ16769 361 aa10.2□□□□□ -0.78
UCHL3-202ENST00000419068 MPNDQ8N594 471 aa10.2□□□□□ -0.78
UCHL3-202ENST00000419068 LIMD1Q9UGP4 676 aa10.2□□□□□ -0.78
UCHL3-202ENST00000419068 ADH1CP00326 375 aa10.19□□□□□ -0.78
UCHL3-202ENST00000419068 GJA5P36382 358 aa10.19□□□□□ -0.78
UCHL3-202ENST00000419068 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
UCHL3-202ENST00000419068 ZBTB3Q9H5J0 574 aa10.19□□□□□ -0.78
UCHL3-202ENST00000419068 TSC1Q92574 1164 aa10.18□□□□□ -0.78
UCHL3-202ENST00000419068 IRF7Q92985 503 aa10.18□□□□□ -0.78
UCHL3-202ENST00000419068 ITPKCQ96DU7 683 aa10.17□□□□□ -0.78
UCHL3-202ENST00000419068 CDK15Q96Q40 435 aa10.17□□□□□ -0.78
UCHL3-202ENST00000419068 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
UCHL3-202ENST00000419068 GRM5P41594 1212 aa10.16□□□□□ -0.78
UCHL3-202ENST00000419068 C6orf118Q5T5N4 469 aa10.15□□□□□ -0.78
UCHL3-202ENST00000419068 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
UCHL3-202ENST00000419068 SCARF1Q14162 830 aa10.14□□□□□ -0.79
UCHL3-202ENST00000419068 AGERQ15109 404 aa10.14□□□□□ -0.79
UCHL3-202ENST00000419068 NPAS3Q8IXF0 933 aa10.14□□□□□ -0.79
UCHL3-202ENST00000419068 ZSCAN1Q8NBB4 408 aa10.14□□□□□ -0.79
UCHL3-202ENST00000419068 AK7Q96M32 723 aa10.14□□□□□ -0.79
UCHL3-202ENST00000419068 DIXDC1Q155Q3 683 aa10.13□□□□□ -0.79
UCHL3-202ENST00000419068 PRPF38BQ5VTL8 546 aaKnown RBP10.13□□□□□ -0.79
UCHL3-202ENST00000419068 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
UCHL3-202ENST00000419068 PDE4DQ08499 809 aa10.11□□□□□ -0.79
UCHL3-202ENST00000419068 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
UCHL3-202ENST00000419068 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
UCHL3-202ENST00000419068 LILRB3O75022 631 aa10.1□□□□□ -0.79
UCHL3-202ENST00000419068 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
UCHL3-202ENST00000419068 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
UCHL3-202ENST00000419068 NR5A1Q13285 461 aa10.08□□□□□ -0.8
UCHL3-202ENST00000419068 BPHLQ86WA6 291 aaPredicted RBP10.08□□□□□ -0.8
UCHL3-202ENST00000419068 MAN1A2O60476 641 aa10.07□□□□□ -0.8
UCHL3-202ENST00000419068 FSHRP23945 695 aa10.07□□□□□ -0.8
UCHL3-202ENST00000419068 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
UCHL3-202ENST00000419068 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
UCHL3-202ENST00000419068 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
UCHL3-202ENST00000419068 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
UCHL3-202ENST00000419068 BMP2P12643 396 aa10.06□□□□□ -0.8
UCHL3-202ENST00000419068 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
UCHL3-202ENST00000419068 MEIOBQ8N635 442 aa10.06□□□□□ -0.8
UCHL3-202ENST00000419068 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
UCHL3-202ENST00000419068 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
UCHL3-202ENST00000419068 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
UCHL3-202ENST00000419068 DNMT3LQ9UJW3 386 aa10.05□□□□□ -0.8
UCHL3-202ENST00000419068 VSIG8P0DPA2 414 aa10.04□□□□□ -0.8
UCHL3-202ENST00000419068 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
UCHL3-202ENST00000419068 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
UCHL3-202ENST00000419068 SOS2Q07890 1332 aaPredicted RBP10.03□□□□□ -0.8
UCHL3-202ENST00000419068 FAM181BA6NEQ2 426 aa10.02□□□□□ -0.81
UCHL3-202ENST00000419068 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
UCHL3-202ENST00000419068 VASH1Q7L8A9 365 aaPredicted RBP10.02□□□□□ -0.81
UCHL3-202ENST00000419068 CLK2P49760 499 aaKnown RBP10.01□□□□□ -0.81
UCHL3-202ENST00000419068 CTDSPL2Q05D32 466 aa10.01□□□□□ -0.81
UCHL3-202ENST00000419068 CBLBQ13191 982 aa10□□□□□ -0.81
UCHL3-202ENST00000419068 HELBQ8NG08 1087 aaPredicted RBP10□□□□□ -0.81
UCHL3-202ENST00000419068 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
UCHL3-202ENST00000419068 NBPF14Q5TI25 921 aa9.99□□□□□ -0.81
UCHL3-202ENST00000419068 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
UCHL3-202ENST00000419068 GPR161Q8N6U8 529 aaKnown RBP9.99□□□□□ -0.81
UCHL3-202ENST00000419068 ARMC2Q8NEN0 867 aa9.99□□□□□ -0.81
UCHL3-202ENST00000419068 LRRN4Q8WUT4 740 aa9.99□□□□□ -0.81
UCHL3-202ENST00000419068 MAP4K5Q9Y4K4 846 aa9.99□□□□□ -0.81
UCHL3-202ENST00000419068 UPP2O95045 317 aa9.98□□□□□ -0.81
UCHL3-202ENST00000419068 CCDC116Q8IYX3 515 aa9.98□□□□□ -0.81
UCHL3-202ENST00000419068 FIGNL2A6NMB9 653 aa9.97□□□□□ -0.81
UCHL3-202ENST00000419068 KRT76Q01546 638 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms