RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 HDGFL2Q7Z4V5 671 aaPredicted RBP27.68■■■□□ 2.02
RPUSD3-202ENST00000418713 TERF2IPQ9NYB0 399 aa27.67■■■□□ 2.02
RPUSD3-202ENST00000418713 ADAMTS2O95450 1211 aa27.65■■■□□ 2.02
RPUSD3-202ENST00000418713 ABTB2Q8N961 1025 aa27.65■■■□□ 2.02
RPUSD3-202ENST00000418713 NGLY1Q96IV0 654 aa27.64■■■□□ 2.02
RPUSD3-202ENST00000418713 NLRP13Q86W25 1043 aa27.63■■■□□ 2.01
RPUSD3-202ENST00000418713 LRP6O75581 1613 aa27.63■■■□□ 2.01
RPUSD3-202ENST00000418713 C8orf37Q96NL8 207 aa27.62■■■□□ 2.01
RPUSD3-202ENST00000418713 TRPM3Q9HCF6 1732 aaPredicted RBP27.61■■■□□ 2.01
RPUSD3-202ENST00000418713 USP6P35125 1406 aa27.61■■■□□ 2.01
RPUSD3-202ENST00000418713 KTN1Q86UP2 1357 aaKnown RBP27.6■■■□□ 2.01
RPUSD3-202ENST00000418713 HSPA5P11021 654 aaKnown RBP27.59■■■□□ 2.01
RPUSD3-202ENST00000418713 SLC12A5Q9H2X9 1139 aa27.59■■■□□ 2.01
RPUSD3-202ENST00000418713 TTC21AQ8NDW8 1320 aa27.59■■■□□ 2.01
RPUSD3-202ENST00000418713 CPSF1Q10570 1443 aaKnown RBP27.58■■■□□ 2
RPUSD3-202ENST00000418713 ALS2Q96Q42 1657 aa27.56■■■□□ 2
RPUSD3-202ENST00000418713 AFF2P51816 1311 aa27.56■■■□□ 2
RPUSD3-202ENST00000418713 CABLES1Q8TDN4 633 aa27.55■■■□□ 2
RPUSD3-202ENST00000418713 NLRP6P59044 892 aa27.54■■■□□ 2
RPUSD3-202ENST00000418713 TTC21BQ7Z4L5 1316 aa27.54■■■□□ 2
RPUSD3-202ENST00000418713 FNBP4Q8N3X1 1017 aaPredicted RBP27.54■■■□□ 2
RPUSD3-202ENST00000418713 PLEKHG5O94827 1062 aa27.53■■■□□ 2
RPUSD3-202ENST00000418713 RGS17Q9UGC6 210 aaPredicted RBP27.53■■■□□ 2
RPUSD3-202ENST00000418713 USP21Q9UK80 565 aa27.52■■■□□ 2
RPUSD3-202ENST00000418713 SSH2Q76I76 1423 aa27.5■■□□□ 1.99
RPUSD3-202ENST00000418713 AKAP12Q02952 1782 aa27.5■■□□□ 1.99
RPUSD3-202ENST00000418713 NUTM2GQ5VZR2 741 aa27.5■■□□□ 1.99
RPUSD3-202ENST00000418713 KCNH5Q8NCM2 988 aa27.48■■□□□ 1.99
RPUSD3-202ENST00000418713 TRPC5Q9UL62 973 aaPredicted RBP27.48■■□□□ 1.99
RPUSD3-202ENST00000418713 EDC4Q6P2E9 1401 aaKnown RBP27.48■■□□□ 1.99
RPUSD3-202ENST00000418713 ANKRD36BQ8N2N9 1353 aa27.48■■□□□ 1.99
RPUSD3-202ENST00000418713 MARF1Q9Y4F3 1742 aaKnown RBP27.47■■□□□ 1.99
RPUSD3-202ENST00000418713 QTRT2Q9H974 415 aaKnown RBP27.47■■□□□ 1.99
RPUSD3-202ENST00000418713 A0A1W2PP64 1363 aa27.46■■□□□ 1.99
RPUSD3-202ENST00000418713 USP19O94966 1318 aa27.45■■□□□ 1.99
RPUSD3-202ENST00000418713 GCP02774 474 aa27.45■■□□□ 1.98
RPUSD3-202ENST00000418713 RXRBP28702 533 aa27.45■■□□□ 1.98
RPUSD3-202ENST00000418713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.45■■□□□ 1.98
RPUSD3-202ENST00000418713 POLR3GLQ9BT43 218 aa27.45■■□□□ 1.98
RPUSD3-202ENST00000418713 PRDM11Q9NQV5 511 aa27.45■■□□□ 1.98
RPUSD3-202ENST00000418713 CD163L1Q9NR16 1453 aa27.44■■□□□ 1.98
RPUSD3-202ENST00000418713 POTEAQ6S8J7 498 aa27.44■■□□□ 1.98
RPUSD3-202ENST00000418713 UNC5CLQ8IV45 518 aa27.44■■□□□ 1.98
RPUSD3-202ENST00000418713 ZEB1P37275 1124 aaPredicted RBP27.43■■□□□ 1.98
RPUSD3-202ENST00000418713 MON2Q7Z3U7 1717 aa27.42■■□□□ 1.98
RPUSD3-202ENST00000418713 FAM83GA6ND36 823 aa27.42■■□□□ 1.98
RPUSD3-202ENST00000418713 RBM6P78332 1123 aaKnown RBP27.41■■□□□ 1.98
RPUSD3-202ENST00000418713 USP31Q70CQ4 1352 aa27.4■■□□□ 1.98
RPUSD3-202ENST00000418713 ZC3H6P61129 1189 aaKnown RBP27.4■■□□□ 1.98
RPUSD3-202ENST00000418713 ABCA3Q99758 1704 aa27.39■■□□□ 1.98
RPUSD3-202ENST00000418713 CPDO75976 1380 aa27.38■■□□□ 1.97
RPUSD3-202ENST00000418713 SLIT2O94813 1529 aa27.38■■□□□ 1.97
RPUSD3-202ENST00000418713 BTG4Q9NY30 223 aa27.37■■□□□ 1.97
RPUSD3-202ENST00000418713 KIAA0232Q92628 1395 aa27.36■■□□□ 1.97
RPUSD3-202ENST00000418713 COG3Q96JB2 828 aa27.36■■□□□ 1.97
RPUSD3-202ENST00000418713 BCL9LQ86UU0 1499 aa27.36■■□□□ 1.97
RPUSD3-202ENST00000418713 NRKQ7Z2Y5 1582 aa27.35■■□□□ 1.97
RPUSD3-202ENST00000418713 COL14A1Q05707 1796 aaKnown RBP27.35■■□□□ 1.97
RPUSD3-202ENST00000418713 NME9Q86XW9 330 aa27.35■■□□□ 1.97
RPUSD3-202ENST00000418713 CRYBG1Q9Y4K1 1723 aa27.35■■□□□ 1.97
RPUSD3-202ENST00000418713 PHRF1Q9P1Y6 1649 aaKnown RBP27.34■■□□□ 1.97
RPUSD3-202ENST00000418713 PIK3C2AO00443 1686 aa27.33■■□□□ 1.97
RPUSD3-202ENST00000418713 EVA1CP58658 441 aa27.33■■□□□ 1.97
RPUSD3-202ENST00000418713 VPS72Q15906 364 aa27.33■■□□□ 1.97
RPUSD3-202ENST00000418713 NWD2Q9ULI1 1742 aa27.33■■□□□ 1.96
RPUSD3-202ENST00000418713 SLIT3O75094 1523 aa27.32■■□□□ 1.96
RPUSD3-202ENST00000418713 GJD4Q96KN9 370 aaPredicted RBP27.32■■□□□ 1.96
RPUSD3-202ENST00000418713 ATRNO75882 1429 aa27.32■■□□□ 1.96
RPUSD3-202ENST00000418713 CCDC9Q9Y3X0 531 aaKnown RBP27.31■■□□□ 1.96
RPUSD3-202ENST00000418713 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.3■■□□□ 1.96
RPUSD3-202ENST00000418713 CHRNA2Q15822 529 aa27.29■■□□□ 1.96
RPUSD3-202ENST00000418713 CDK12Q9NYV4 1490 aaPredicted RBP27.29■■□□□ 1.96
RPUSD3-202ENST00000418713 AATKQ6ZMQ8 1374 aa27.28■■□□□ 1.96
RPUSD3-202ENST00000418713 CGNL1Q0VF96 1302 aa27.28■■□□□ 1.96
RPUSD3-202ENST00000418713 ZBTB7CA1YPR0 619 aa27.28■■□□□ 1.96
RPUSD3-202ENST00000418713 FYB1O15117 783 aa27.27■■□□□ 1.96
RPUSD3-202ENST00000418713 ARHGEF25Q86VW2 580 aa27.27■■□□□ 1.96
RPUSD3-202ENST00000418713 PANK3Q9H999 370 aa27.27■■□□□ 1.96
RPUSD3-202ENST00000418713 KIF7Q2M1P5 1343 aa27.26■■□□□ 1.95
RPUSD3-202ENST00000418713 C11orf95C9JLR9 678 aaPredicted RBP27.26■■□□□ 1.95
RPUSD3-202ENST00000418713 SOX12O15370 315 aa27.26■■□□□ 1.95
RPUSD3-202ENST00000418713 PLCH1Q4KWH8 1693 aa27.26■■□□□ 1.95
RPUSD3-202ENST00000418713 CARD14Q9BXL6 1004 aa27.25■■□□□ 1.95
RPUSD3-202ENST00000418713 ZRANB1Q9UGI0 708 aa27.25■■□□□ 1.95
RPUSD3-202ENST00000418713 USP54Q70EL1 1684 aa27.24■■□□□ 1.95
RPUSD3-202ENST00000418713 NSD3Q9BZ95 1437 aa27.24■■□□□ 1.95
RPUSD3-202ENST00000418713 MYOM1P52179 1685 aa27.24■■□□□ 1.95
RPUSD3-202ENST00000418713 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
RPUSD3-202ENST00000418713 OVOS2A0A0J9YW53 1432 aa27.23■■□□□ 1.95
RPUSD3-202ENST00000418713 OVOS2Q6IE36 1432 aa27.23■■□□□ 1.95
RPUSD3-202ENST00000418713 GGNBP2Q9H3C7 697 aa27.22■■□□□ 1.95
RPUSD3-202ENST00000418713 KNSTRNQ9Y448 316 aa27.22■■□□□ 1.95
RPUSD3-202ENST00000418713 SPATA31A5Q5VU36 1347 aa27.18■■□□□ 1.94
RPUSD3-202ENST00000418713 SPATA31A7Q8IWB4 1347 aa27.18■■□□□ 1.94
RPUSD3-202ENST00000418713 ABCC6O95255 1503 aa27.17■■□□□ 1.94
RPUSD3-202ENST00000418713 CCDC7Q96M83 1385 aa27.17■■□□□ 1.94
RPUSD3-202ENST00000418713 NFAT5O94916 1531 aa27.16■■□□□ 1.94
RPUSD3-202ENST00000418713 ONECUT3O60422 494 aaPredicted RBP27.16■■□□□ 1.94
RPUSD3-202ENST00000418713 THRAP3Q9Y2W1 955 aaKnown RBP27.16■■□□□ 1.94
RPUSD3-202ENST00000418713 CAMTA1Q9Y6Y1 1673 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms