RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
TMEM253-201ENST00000418511 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
TMEM253-201ENST00000418511 SBNO1A3KN83 1393 aa17.06■□□□□ 0.32
TMEM253-201ENST00000418511 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
TMEM253-201ENST00000418511 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
TMEM253-201ENST00000418511 PIK3C2AO00443 1686 aa17.05■□□□□ 0.32
TMEM253-201ENST00000418511 LRP6O75581 1613 aa17.05■□□□□ 0.32
TMEM253-201ENST00000418511 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
TMEM253-201ENST00000418511 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
TMEM253-201ENST00000418511 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
TMEM253-201ENST00000418511 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
TMEM253-201ENST00000418511 ANKRD36BQ8N2N9 1353 aa17.04■□□□□ 0.32
TMEM253-201ENST00000418511 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
TMEM253-201ENST00000418511 HDGFL2Q7Z4V5 671 aaPredicted RBP17.04■□□□□ 0.32
TMEM253-201ENST00000418511 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
TMEM253-201ENST00000418511 COL22A1Q8NFW1 1626 aaPredicted RBP17.04■□□□□ 0.32
TMEM253-201ENST00000418511 TERF2IPQ9NYB0 399 aa17.03■□□□□ 0.32
TMEM253-201ENST00000418511 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
TMEM253-201ENST00000418511 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
TMEM253-201ENST00000418511 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
TMEM253-201ENST00000418511 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
TMEM253-201ENST00000418511 TTC21BQ7Z4L5 1316 aa17.01■□□□□ 0.31
TMEM253-201ENST00000418511 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
TMEM253-201ENST00000418511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMEM253-201ENST00000418511 EDC4Q6P2E9 1401 aaKnown RBP17■□□□□ 0.31
TMEM253-201ENST00000418511 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
TMEM253-201ENST00000418511 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
TMEM253-201ENST00000418511 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
TMEM253-201ENST00000418511 PHRF1Q9P1Y6 1649 aaKnown RBP16.99■□□□□ 0.31
TMEM253-201ENST00000418511 CARD14Q9BXL6 1004 aa16.99■□□□□ 0.31
TMEM253-201ENST00000418511 BRD4O60885 1362 aaPredicted RBP16.99■□□□□ 0.31
TMEM253-201ENST00000418511 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
TMEM253-201ENST00000418511 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
TMEM253-201ENST00000418511 PANK3Q9H999 370 aa16.98■□□□□ 0.31
TMEM253-201ENST00000418511 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
TMEM253-201ENST00000418511 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
TMEM253-201ENST00000418511 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
TMEM253-201ENST00000418511 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
TMEM253-201ENST00000418511 NME9Q86XW9 330 aa16.96■□□□□ 0.31
TMEM253-201ENST00000418511 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
TMEM253-201ENST00000418511 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
TMEM253-201ENST00000418511 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
TMEM253-201ENST00000418511 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
TMEM253-201ENST00000418511 NLRP6P59044 892 aa16.93■□□□□ 0.3
TMEM253-201ENST00000418511 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
TMEM253-201ENST00000418511 SLIT3O75094 1523 aa16.92■□□□□ 0.3
TMEM253-201ENST00000418511 USP19O94966 1318 aa16.91■□□□□ 0.3
TMEM253-201ENST00000418511 OVOS2A0A0J9YW53 1432 aa16.91■□□□□ 0.3
TMEM253-201ENST00000418511 OVOS2Q6IE36 1432 aa16.91■□□□□ 0.3
TMEM253-201ENST00000418511 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
TMEM253-201ENST00000418511 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
TMEM253-201ENST00000418511 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
TMEM253-201ENST00000418511 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
TMEM253-201ENST00000418511 FYB1O15117 783 aa16.9■□□□□ 0.3
TMEM253-201ENST00000418511 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
TMEM253-201ENST00000418511 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
TMEM253-201ENST00000418511 SOX12O15370 315 aa16.89■□□□□ 0.29
TMEM253-201ENST00000418511 LTN1O94822 1766 aa16.88■□□□□ 0.29
TMEM253-201ENST00000418511 NFAT5O94916 1531 aa16.88■□□□□ 0.29
TMEM253-201ENST00000418511 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
TMEM253-201ENST00000418511 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
TMEM253-201ENST00000418511 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
TMEM253-201ENST00000418511 GCP02774 474 aa16.86■□□□□ 0.29
TMEM253-201ENST00000418511 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
TMEM253-201ENST00000418511 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
TMEM253-201ENST00000418511 KNSTRNQ9Y448 316 aa16.86■□□□□ 0.29
TMEM253-201ENST00000418511 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
TMEM253-201ENST00000418511 COG3Q96JB2 828 aa16.86■□□□□ 0.29
TMEM253-201ENST00000418511 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
TMEM253-201ENST00000418511 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
TMEM253-201ENST00000418511 COL14A1Q05707 1796 aaKnown RBP16.84■□□□□ 0.29
TMEM253-201ENST00000418511 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
TMEM253-201ENST00000418511 FBLN1P23142 703 aa16.84■□□□□ 0.29
TMEM253-201ENST00000418511 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
TMEM253-201ENST00000418511 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
TMEM253-201ENST00000418511 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
TMEM253-201ENST00000418511 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
TMEM253-201ENST00000418511 CHRNA2Q15822 529 aa16.82■□□□□ 0.28
TMEM253-201ENST00000418511 COL18A1P39060 1754 aa16.82■□□□□ 0.28
TMEM253-201ENST00000418511 AFF2P51816 1311 aa16.81■□□□□ 0.28
TMEM253-201ENST00000418511 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
TMEM253-201ENST00000418511 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
TMEM253-201ENST00000418511 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
TMEM253-201ENST00000418511 ZNF772Q68DY9 489 aaPredicted RBP16.81■□□□□ 0.28
TMEM253-201ENST00000418511 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
TMEM253-201ENST00000418511 NWD2Q9ULI1 1742 aa16.81■□□□□ 0.28
TMEM253-201ENST00000418511 NSD2O96028 1365 aa16.81■□□□□ 0.28
TMEM253-201ENST00000418511 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
TMEM253-201ENST00000418511 NGLY1Q96IV0 654 aa16.8■□□□□ 0.28
TMEM253-201ENST00000418511 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
TMEM253-201ENST00000418511 CPDO75976 1380 aa16.8■□□□□ 0.28
TMEM253-201ENST00000418511 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
TMEM253-201ENST00000418511 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
TMEM253-201ENST00000418511 SLIT2O94813 1529 aa16.78■□□□□ 0.28
TMEM253-201ENST00000418511 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
TMEM253-201ENST00000418511 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
TMEM253-201ENST00000418511 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
TMEM253-201ENST00000418511 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.28
TMEM253-201ENST00000418511 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
TMEM253-201ENST00000418511 NPC1L1Q9UHC9 1359 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms