RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 ECM1Q16610 540 aa6.29□□□□□ -1.4
RFC4-205ENST00000418288 NOP9Q86U38 636 aaKnown RBP6.29□□□□□ -1.4
RFC4-205ENST00000418288 CDCA7Q9BWT1 371 aaPredicted RBP6.29□□□□□ -1.4
RFC4-205ENST00000418288 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
RFC4-205ENST00000418288 OCEL1Q9H607 264 aa6.29□□□□□ -1.4
RFC4-205ENST00000418288 C3orf80F5H4A9 247 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 LZTS3O60299 673 aaPredicted RBP6.28□□□□□ -1.4
RFC4-205ENST00000418288 SKIP12755 728 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 NR1H3Q13133 447 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 MTMR2Q13614 643 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 PIP4P2Q8N4L2 257 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 FAM200AQ8TCP9 573 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 TINF2Q9BSI4 451 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 TMEM134Q9H6X4 195 aa6.28□□□□□ -1.4
RFC4-205ENST00000418288 CUEDC1Q9NWM3 386 aaPredicted RBP6.28□□□□□ -1.4
RFC4-205ENST00000418288 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
RFC4-205ENST00000418288 ARID4BQ4LE39 1312 aaPredicted RBP6.27□□□□□ -1.41
RFC4-205ENST00000418288 H3BRB1 525 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 SCAMP3O14828 347 aaKnown RBP6.27□□□□□ -1.41
RFC4-205ENST00000418288 MARCH6O60337 910 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 ICMTO60725 284 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 DNAJB2P25686 324 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 SWI5Q1ZZU3 235 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 ANKMY2Q8IV38 441 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 DEPDC4Q8N2C3 294 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 DNAJC2Q99543 621 aaKnown RBP6.27□□□□□ -1.41
RFC4-205ENST00000418288 TUT1Q9H6E5 874 aaKnown RBP6.27□□□□□ -1.41
RFC4-205ENST00000418288 BRPF3Q9ULD4 1205 aa6.27□□□□□ -1.41
RFC4-205ENST00000418288 FBXO45P0C2W1 286 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 MAPK1P28482 360 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 GCGRP47871 477 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 ZNF211Q13398 564 aaPredicted RBP6.26□□□□□ -1.41
RFC4-205ENST00000418288 C9orf131Q5VYM1 1079 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 METTL16Q86W50 562 aaKnown RBP6.26□□□□□ -1.41
RFC4-205ENST00000418288 PNMA1Q8ND90 353 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 TSC1Q92574 1164 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 DCTN4Q9UJW0 460 aa6.26□□□□□ -1.41
RFC4-205ENST00000418288 RASA1P20936 1047 aa6.25□□□□□ -1.41
RFC4-205ENST00000418288 CC2D2BQ6DHV5 1058 aa6.25□□□□□ -1.41
RFC4-205ENST00000418288 LARP1Q6PKG0 1096 aaKnown RBP6.25□□□□□ -1.41
RFC4-205ENST00000418288 NOL8Q76FK4 1167 aaKnown RBP6.25□□□□□ -1.41
RFC4-205ENST00000418288 RDH13Q8NBN7 331 aa6.25□□□□□ -1.41
RFC4-205ENST00000418288 GPATCH3Q96I76 525 aa6.25□□□□□ -1.41
RFC4-205ENST00000418288 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
RFC4-205ENST00000418288 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
RFC4-205ENST00000418288 SBNO2Q9Y2G9 1366 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 TLDC2A0PJX2 215 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 ATP5J2-PTCD1G3V325 749 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 PER1O15534 1290 aaPredicted RBP6.24□□□□□ -1.41
RFC4-205ENST00000418288 DPYDQ12882 1025 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 NCOA4Q13772 614 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 OCLNQ16625 522 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 EGFLAMQ63HQ2 1017 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 RNF135Q8IUD6 432 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 LARGE2Q8N3Y3 721 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 SLC43A3Q8NBI5 491 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 MICAL1Q8TDZ2 1067 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 ZDHHC16Q969W1 377 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 ADAM33Q9BZ11 813 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 ANO2Q9NQ90 1003 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 TBX22Q9Y458 520 aa6.24□□□□□ -1.41
RFC4-205ENST00000418288 RAB11FIP3O75154 756 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 DKK1O94907 266 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 ABL1P00519 1130 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 ARHGAP4P98171 946 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 EAPPQ56P03 285 aaPredicted RBP6.23□□□□□ -1.41
RFC4-205ENST00000418288 IER5LQ5T953 404 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 RGL4Q8IZJ4 473 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 FAM9AQ8IZU1 332 aaPredicted RBP6.23□□□□□ -1.41
RFC4-205ENST00000418288 DHX38Q92620 1227 aaKnown RBP6.23□□□□□ -1.41
RFC4-205ENST00000418288 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
RFC4-205ENST00000418288 TSKSQ9UJT2 592 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 PCDHGA4Q9Y5G9 962 aa6.23□□□□□ -1.41
RFC4-205ENST00000418288 C21orf2O43822 256 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 ATN1P54259 1190 aaPredicted RBP6.22□□□□□ -1.41
RFC4-205ENST00000418288 NUDT18Q6ZVK8 323 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 ZSCAN29Q8IWY8 852 aaPredicted RBP6.22□□□□□ -1.41
RFC4-205ENST00000418288 ZNF592Q92610 1267 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 PIF1Q9H611 641 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 PRKAG2Q9UGJ0 569 aa6.22□□□□□ -1.41
RFC4-205ENST00000418288 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFC4-205ENST00000418288 ZBBXA8MT70 800 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
RFC4-205ENST00000418288 CLDN10P78369 228 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 CCDC144BQ3MJ40 725 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 SDE2Q6IQ49 451 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 NT5DC4Q86YG4 428 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 NLGN1Q8N2Q7 840 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 UBE2Q2Q8WVN8 375 aa6.21□□□□□ -1.42
RFC4-205ENST00000418288 PRMT3O60678 531 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 PHTF2Q8N3S3 785 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 OGFOD1Q8N543 542 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 ZNF454Q8N9F8 522 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 TGIF2Q9GZN2 237 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 SUGT1Q9Y2Z0 365 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 PPME1Q9Y570 386 aa6.2□□□□□ -1.42
RFC4-205ENST00000418288 GALR2O43603 387 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms