RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MADDQ8WXG6 1647 aa9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 PHF23Q9BUL5 403 aaPredicted RBP9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 BCL2L13Q9BXK5 485 aa9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 IQSEC2Q5JU85 1478 aa9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 CFAP74Q9C0B2 1584 aa9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 SASS6Q6UVJ0 657 aa9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 KIF2CQ99661 725 aa9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 CCDC94Q9BW85 323 aaPredicted RBP9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 ZHX1Q9UKY1 873 aaPredicted RBP9.99□□□□□ -0.81
HMGXB4-202ENST00000418170 POLR3AO14802 1390 aaPredicted RBP9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 KANK1Q14678 1352 aa9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 SSFA2P28290 1259 aa9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 BAG4O95429 457 aaKnown RBP9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 NEURL4Q96JN8 1562 aa9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 K7ELQ4 463 aaPredicted RBP9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
HMGXB4-202ENST00000418170 PRDM10Q9NQV6 1147 aa9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 SCAF11Q99590 1463 aaKnown RBP9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 PIK3C2BO00750 1634 aa9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
HMGXB4-202ENST00000418170 HECW2Q9P2P5 1572 aa9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 ZSCAN23Q3MJ62 389 aa9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 ZKSCAN2Q63HK3 967 aa9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 RBSNQ9H1K0 784 aa9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 ARID3AQ99856 593 aa9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 TRPM2O94759 1503 aa9.96□□□□□ -0.81
HMGXB4-202ENST00000418170 FTSJ3Q8IY81 847 aaKnown RBP9.96□□□□□ -0.82
HMGXB4-202ENST00000418170 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
HMGXB4-202ENST00000418170 FOXD4L1Q9NU39 408 aa9.96□□□□□ -0.82
HMGXB4-202ENST00000418170 LMTK2Q8IWU2 1503 aa9.95□□□□□ -0.82
HMGXB4-202ENST00000418170 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
HMGXB4-202ENST00000418170 NEUROD2Q15784 382 aa9.95□□□□□ -0.82
HMGXB4-202ENST00000418170 CAVIN1Q6NZI2 390 aaKnown RBP9.95□□□□□ -0.82
HMGXB4-202ENST00000418170 MYO5BQ9ULV0 1848 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 PTPRTO14522 1441 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 TCP11L2Q8N4U5 519 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 RRP7AQ9Y3A4 280 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 EFCAB6Q5THR3 1501 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 CCDC39Q9UFE4 941 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 DDX19BQ9UMR2 479 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
HMGXB4-202ENST00000418170 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 NUCB1Q02818 461 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 BMP2KLQ5H9B9 411 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 LMBRD1Q9NUN5 540 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 PPLO60437 1756 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 UGGT1Q9NYU2 1555 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 ADGRL1O94910 1474 aa9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
HMGXB4-202ENST00000418170 ZC3H13Q5T200 1668 aaKnown RBP9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 MCTP1Q6DN14 999 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 MYRIPQ8NFW9 859 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 KIF20AO95235 890 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 CT47B1P0C2W7 299 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 TRIM27P14373 513 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 TNNT2P45379 298 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 CAMSAP1Q5T5Y3 1602 aa9.92□□□□□ -0.82
HMGXB4-202ENST00000418170 KIAA1210Q9ULL0 1709 aa9.91□□□□□ -0.82
HMGXB4-202ENST00000418170 KIF16BQ96L93 1317 aa9.91□□□□□ -0.82
HMGXB4-202ENST00000418170 CYP2E1P05181 493 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-202ENST00000418170 NUCB2P80303 420 aa9.91□□□□□ -0.82
HMGXB4-202ENST00000418170 NCBP3Q53F19 620 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-202ENST00000418170 RBM42Q9BTD8 480 aaKnown RBP9.91□□□□□ -0.82
HMGXB4-202ENST00000418170 ITPRIPQ8IWB1 547 aa9.9□□□□□ -0.82
HMGXB4-202ENST00000418170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.9□□□□□ -0.821e-6■■□□□ 12.6
HMGXB4-202ENST00000418170 TSPOAP1O95153 1857 aa9.9□□□□□ -0.82
HMGXB4-202ENST00000418170 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.82
HMGXB4-202ENST00000418170 CHD1LQ86WJ1 897 aa9.9□□□□□ -0.82
HMGXB4-202ENST00000418170 LNPKQ9C0E8 428 aa9.9□□□□□ -0.82
HMGXB4-202ENST00000418170 ZBTB40Q9NUA8 1239 aa9.9□□□□□ -0.82
HMGXB4-202ENST00000418170 ERVK-7P63135 1459 aa9.9□□□□□ -0.83
HMGXB4-202ENST00000418170 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.83
HMGXB4-202ENST00000418170 LETM1O95202 739 aaPredicted RBP9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 GTF2F1P35269 517 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 KIAA2012Q0VF49 1180 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 PPP4R3BQ5MIZ7 849 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 ATF7IPQ6VMQ6 1270 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 AFAP1Q8N556 730 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 PRIMPOLQ96LW4 560 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 SMC4Q9NTJ3 1288 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 GPT2Q8TD30 523 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 KIF1BO60333 1816 aa9.89□□□□□ -0.83
HMGXB4-202ENST00000418170 ADGRB2O60241 1585 aa9.88□□□□□ -0.83
HMGXB4-202ENST00000418170 SLC24A1O60721 1099 aa9.88□□□□□ -0.83
HMGXB4-202ENST00000418170 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
HMGXB4-202ENST00000418170 HMGN5P82970 282 aaKnown RBP9.88□□□□□ -0.83
HMGXB4-202ENST00000418170 REREQ9P2R6 1566 aa9.88□□□□□ -0.83
HMGXB4-202ENST00000418170 PDE4CQ08493 712 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms