RNA–Protein interactions for RNA: ENST00000417903.5

NDUFA3-205, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-205ENST00000417903 RXRBP28702 533 aa21.36■■□□□ 1.01
NDUFA3-205ENST00000417903 PUS7Q96PZ0 661 aaKnown RBP21.36■■□□□ 1.01
NDUFA3-205ENST00000417903 ZNF692Q9BU19 519 aaPredicted RBP21.36■■□□□ 1.01
NDUFA3-205ENST00000417903 USP21Q9UK80 565 aa21.36■■□□□ 1.01
NDUFA3-205ENST00000417903 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
NDUFA3-205ENST00000417903 TESK2Q96S53 571 aa21.34■■□□□ 1.01
NDUFA3-205ENST00000417903 ABTB2Q8N961 1025 aa21.33■■□□□ 1.01
NDUFA3-205ENST00000417903 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
NDUFA3-205ENST00000417903 TRPC5Q9UL62 973 aaPredicted RBP21.32■■□□□ 1
NDUFA3-205ENST00000417903 TRPM3Q9HCF6 1732 aaPredicted RBP21.31■■□□□ 1
NDUFA3-205ENST00000417903 USP47Q96K76 1375 aa21.31■■□□□ 1
NDUFA3-205ENST00000417903 RBM6P78332 1123 aaKnown RBP21.3■■□□□ 1
NDUFA3-205ENST00000417903 NUTM2GQ5VZR2 741 aa21.29■■□□□ 1
NDUFA3-205ENST00000417903 NLRP13Q86W25 1043 aa21.29■■□□□ 1
NDUFA3-205ENST00000417903 FAM83GA6ND36 823 aa21.28■■□□□ 1
NDUFA3-205ENST00000417903 UNC5CLQ8IV45 518 aa21.28■■□□□ 1
NDUFA3-205ENST00000417903 TMC1Q8TDI8 760 aa21.28■■□□□ 1
NDUFA3-205ENST00000417903 USP6P35125 1406 aa21.28■■□□□ 1
NDUFA3-205ENST00000417903 TMF1P82094 1093 aa21.27■■□□□ 1
NDUFA3-205ENST00000417903 ALS2Q96Q42 1657 aa21.27■■□□□ 1
NDUFA3-205ENST00000417903 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
NDUFA3-205ENST00000417903 HDGFL2Q7Z4V5 671 aaPredicted RBP21.25■□□□□ 0.99
NDUFA3-205ENST00000417903 SLC12A5Q9H2X9 1139 aa21.25■□□□□ 0.99
NDUFA3-205ENST00000417903 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 SSH2Q76I76 1423 aa21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 NLRP6P59044 892 aa21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 TERF2IPQ9NYB0 399 aa21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 TTC21BQ7Z4L5 1316 aa21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 SLIT2O94813 1529 aa21.24■□□□□ 0.99
NDUFA3-205ENST00000417903 KTN1Q86UP2 1357 aaKnown RBP21.23■□□□□ 0.99
NDUFA3-205ENST00000417903 ATRNO75882 1429 aa21.23■□□□□ 0.99
NDUFA3-205ENST00000417903 PRDM11Q9NQV5 511 aa21.23■□□□□ 0.99
NDUFA3-205ENST00000417903 GJD4Q96KN9 370 aaPredicted RBP21.22■□□□□ 0.99
NDUFA3-205ENST00000417903 USP19O94966 1318 aa21.22■□□□□ 0.99
NDUFA3-205ENST00000417903 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
NDUFA3-205ENST00000417903 CDK12Q9NYV4 1490 aaPredicted RBP21.21■□□□□ 0.99
NDUFA3-205ENST00000417903 GCP02774 474 aa21.21■□□□□ 0.99
NDUFA3-205ENST00000417903 ZC3H6P61129 1189 aaKnown RBP21.21■□□□□ 0.99
NDUFA3-205ENST00000417903 NINLQ9Y2I6 1382 aa21.21■□□□□ 0.99
NDUFA3-205ENST00000417903 BTG4Q9NY30 223 aa21.2■□□□□ 0.98
NDUFA3-205ENST00000417903 MARF1Q9Y4F3 1742 aaKnown RBP21.2■□□□□ 0.98
NDUFA3-205ENST00000417903 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
NDUFA3-205ENST00000417903 VPS72Q15906 364 aa21.19■□□□□ 0.98
NDUFA3-205ENST00000417903 KIAA0232Q92628 1395 aa21.18■□□□□ 0.98
NDUFA3-205ENST00000417903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.16■□□□□ 0.98
NDUFA3-205ENST00000417903 CCDC9Q9Y3X0 531 aaKnown RBP21.16■□□□□ 0.98
NDUFA3-205ENST00000417903 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
NDUFA3-205ENST00000417903 CD163L1Q9NR16 1453 aa21.15■□□□□ 0.98
NDUFA3-205ENST00000417903 CPDO75976 1380 aa21.15■□□□□ 0.98
NDUFA3-205ENST00000417903 CHRNA2Q15822 529 aa21.15■□□□□ 0.98
NDUFA3-205ENST00000417903 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
NDUFA3-205ENST00000417903 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
NDUFA3-205ENST00000417903 A0A1W2PP64 1363 aa21.12■□□□□ 0.97
NDUFA3-205ENST00000417903 RGS12O14924 1447 aa21.12■□□□□ 0.97
NDUFA3-205ENST00000417903 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
NDUFA3-205ENST00000417903 COL14A1Q05707 1796 aaKnown RBP21.11■□□□□ 0.97
NDUFA3-205ENST00000417903 EVA1CP58658 441 aa21.11■□□□□ 0.97
NDUFA3-205ENST00000417903 USP31Q70CQ4 1352 aa21.1■□□□□ 0.97
NDUFA3-205ENST00000417903 CRYBG1Q9Y4K1 1723 aa21.1■□□□□ 0.97
NDUFA3-205ENST00000417903 ONECUT3O60422 494 aaPredicted RBP21.1■□□□□ 0.97
NDUFA3-205ENST00000417903 NME9Q86XW9 330 aa21.1■□□□□ 0.97
NDUFA3-205ENST00000417903 AKAP12Q02952 1782 aa21.1■□□□□ 0.97
NDUFA3-205ENST00000417903 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.09■□□□□ 0.97
NDUFA3-205ENST00000417903 NWD2Q9ULI1 1742 aa21.09■□□□□ 0.97
NDUFA3-205ENST00000417903 ANKRD36BQ8N2N9 1353 aa21.09■□□□□ 0.97
NDUFA3-205ENST00000417903 STRN4Q9NRL3 753 aa21.08■□□□□ 0.97
NDUFA3-205ENST00000417903 ZRANB1Q9UGI0 708 aa21.08■□□□□ 0.97
NDUFA3-205ENST00000417903 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 SPATA31A5Q5VU36 1347 aa21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 SPATA31A7Q8IWB4 1347 aa21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 ARHGEF25Q86VW2 580 aa21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 SLIT3O75094 1523 aa21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 AATKQ6ZMQ8 1374 aa21.07■□□□□ 0.96
NDUFA3-205ENST00000417903 PLCH1Q4KWH8 1693 aa21.06■□□□□ 0.96
NDUFA3-205ENST00000417903 SEPT12Q8IYM1 358 aa21.06■□□□□ 0.96
NDUFA3-205ENST00000417903 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
NDUFA3-205ENST00000417903 PIK3C2AO00443 1686 aa21.05■□□□□ 0.96
NDUFA3-205ENST00000417903 SOX12O15370 315 aa21.05■□□□□ 0.96
NDUFA3-205ENST00000417903 MON2Q7Z3U7 1717 aa21.04■□□□□ 0.96
NDUFA3-205ENST00000417903 GLI3P10071 1580 aa21.03■□□□□ 0.96
NDUFA3-205ENST00000417903 FAM98CQ17RN3 349 aaKnown RBP21.03■□□□□ 0.96
NDUFA3-205ENST00000417903 UPF1Q92900 1129 aaKnown RBP eCLIP21.03■□□□□ 0.96
NDUFA3-205ENST00000417903 COG3Q96JB2 828 aa21.03■□□□□ 0.96
NDUFA3-205ENST00000417903 SPATA31A1Q5TZJ5 1347 aa21.03■□□□□ 0.96
NDUFA3-205ENST00000417903 LARP1Q6PKG0 1096 aaKnown RBP21.02■□□□□ 0.96
NDUFA3-205ENST00000417903 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
NDUFA3-205ENST00000417903 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.95
NDUFA3-205ENST00000417903 A0A0G2JS52 829 aa21■□□□□ 0.95
NDUFA3-205ENST00000417903 MYT1Q01538 1121 aa21■□□□□ 0.95
NDUFA3-205ENST00000417903 AXIN2Q9Y2T1 843 aa21■□□□□ 0.95
NDUFA3-205ENST00000417903 NRAPQ86VF7 1730 aa20.99■□□□□ 0.95
NDUFA3-205ENST00000417903 FYB1O15117 783 aa20.99■□□□□ 0.95
NDUFA3-205ENST00000417903 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
NDUFA3-205ENST00000417903 TCP11L2Q8N4U5 519 aa20.98■□□□□ 0.95
NDUFA3-205ENST00000417903 USP35Q9P2H5 1018 aa20.98■□□□□ 0.95
NDUFA3-205ENST00000417903 THRAP3Q9Y2W1 955 aaKnown RBP20.98■□□□□ 0.95
NDUFA3-205ENST00000417903 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
NDUFA3-205ENST00000417903 KRT27Q7Z3Y8 459 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms