RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 TERF2IPQ9NYB0 399 aa9.59□□□□□ -0.87
NCL-203ENST00000417652 SBNO1A3KN83 1393 aa9.59□□□□□ -0.87
NCL-203ENST00000417652 ATP7BP35670 1465 aa9.59□□□□□ -0.87
NCL-203ENST00000417652 PXDNQ92626 1479 aa9.59□□□□□ -0.87
NCL-203ENST00000417652 MED1Q15648 1581 aaPredicted RBP9.58□□□□□ -0.88
NCL-203ENST00000417652 USP32Q8NFA0 1604 aa9.58□□□□□ -0.88
NCL-203ENST00000417652 HSPA5P11021 654 aaKnown RBP9.58□□□□□ -0.88
NCL-203ENST00000417652 ZNF772Q68DY9 489 aaPredicted RBP9.58□□□□□ -0.88
NCL-203ENST00000417652 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
NCL-203ENST00000417652 CABLES1Q8TDN4 633 aa9.58□□□□□ -0.88
NCL-203ENST00000417652 SBNO2Q9Y2G9 1366 aa9.58□□□□□ -0.88
NCL-203ENST00000417652 SHPRHQ149N8 1683 aa9.58□□□□□ -0.88
NCL-203ENST00000417652 TNS3Q68CZ2 1445 aa9.57□□□□□ -0.88
NCL-203ENST00000417652 NLRP13Q86W25 1043 aa9.57□□□□□ -0.88
NCL-203ENST00000417652 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
NCL-203ENST00000417652 TESK2Q96S53 571 aa9.57□□□□□ -0.88
NCL-203ENST00000417652 SLC12A5Q9H2X9 1139 aa9.57□□□□□ -0.88
NCL-203ENST00000417652 POLR3AO14802 1390 aaPredicted RBP9.56□□□□□ -0.88
NCL-203ENST00000417652 KTN1Q86UP2 1357 aaKnown RBP9.56□□□□□ -0.88
NCL-203ENST00000417652 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
NCL-203ENST00000417652 NLRP6P59044 892 aa9.56□□□□□ -0.88
NCL-203ENST00000417652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.56□□□□□ -0.88
NCL-203ENST00000417652 AFF2P51816 1311 aa9.56□□□□□ -0.88
NCL-203ENST00000417652 USP21Q9UK80 565 aa9.55□□□□□ -0.88
NCL-203ENST00000417652 QTRT2Q9H974 415 aaKnown RBP9.54□□□□□ -0.88
NCL-203ENST00000417652 CCDC9Q9Y3X0 531 aaKnown RBP9.54□□□□□ -0.88
NCL-203ENST00000417652 LRP6O75581 1613 aa9.53□□□□□ -0.88
NCL-203ENST00000417652 BRD4O60885 1362 aaPredicted RBP9.53□□□□□ -0.88
NCL-203ENST00000417652 SOX12O15370 315 aa9.53□□□□□ -0.88
NCL-203ENST00000417652 RXRBP28702 533 aa9.53□□□□□ -0.88
NCL-203ENST00000417652 ZC3H6P61129 1189 aaKnown RBP9.53□□□□□ -0.88
NCL-203ENST00000417652 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
NCL-203ENST00000417652 TTC21BQ7Z4L5 1316 aa9.53□□□□□ -0.88
NCL-203ENST00000417652 USP6P35125 1406 aa9.52□□□□□ -0.89
NCL-203ENST00000417652 EVA1CP58658 441 aa9.52□□□□□ -0.89
NCL-203ENST00000417652 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
NCL-203ENST00000417652 RGS17Q9UGC6 210 aaPredicted RBP9.52□□□□□ -0.89
NCL-203ENST00000417652 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
NCL-203ENST00000417652 TTC21AQ8NDW8 1320 aa9.52□□□□□ -0.89
NCL-203ENST00000417652 TOPAZ1Q8N9V7 1692 aa9.51□□□□□ -0.89
NCL-203ENST00000417652 NINLQ9Y2I6 1382 aa9.51□□□□□ -0.89
NCL-203ENST00000417652 FAM83GA6ND36 823 aa9.51□□□□□ -0.89
NCL-203ENST00000417652 GCP02774 474 aa9.51□□□□□ -0.89
NCL-203ENST00000417652 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
NCL-203ENST00000417652 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
NCL-203ENST00000417652 COL22A1Q8NFW1 1626 aaPredicted RBP9.5□□□□□ -0.89
NCL-203ENST00000417652 CHRNA2Q15822 529 aa9.5□□□□□ -0.89
NCL-203ENST00000417652 ILDR2Q71H61 639 aa9.5□□□□□ -0.89
NCL-203ENST00000417652 KCNH5Q8NCM2 988 aa9.5□□□□□ -0.89
NCL-203ENST00000417652 BTG4Q9NY30 223 aa9.5□□□□□ -0.89
NCL-203ENST00000417652 TRPM3Q9HCF6 1732 aaPredicted RBP9.5□□□□□ -0.89
NCL-203ENST00000417652 A0A0G2JS52 829 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
NCL-203ENST00000417652 RBM6P78332 1123 aaKnown RBP9.49□□□□□ -0.89
NCL-203ENST00000417652 MYT1Q01538 1121 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 NME9Q86XW9 330 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
NCL-203ENST00000417652 COG3Q96JB2 828 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 STRN4Q9NRL3 753 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
NCL-203ENST00000417652 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
NCL-203ENST00000417652 ALS2Q96Q42 1657 aa9.48□□□□□ -0.89
NCL-203ENST00000417652 ANKRD36BQ8N2N9 1353 aa9.48□□□□□ -0.89
NCL-203ENST00000417652 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
NCL-203ENST00000417652 EDC4Q6P2E9 1401 aaKnown RBP9.48□□□□□ -0.89
NCL-203ENST00000417652 ZRANB1Q9UGI0 708 aa9.47□□□□□ -0.89
NCL-203ENST00000417652 AKAP12Q02952 1782 aa9.47□□□□□ -0.89
NCL-203ENST00000417652 MARF1Q9Y4F3 1742 aaKnown RBP9.46□□□□□ -0.89
NCL-203ENST00000417652 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
NCL-203ENST00000417652 GJD4Q96KN9 370 aaPredicted RBP9.46□□□□□ -0.9
NCL-203ENST00000417652 GGNBP2Q9H3C7 697 aa9.46□□□□□ -0.9
NCL-203ENST00000417652 PANK3Q9H999 370 aa9.46□□□□□ -0.9
NCL-203ENST00000417652 USP19O94966 1318 aa9.46□□□□□ -0.9
NCL-203ENST00000417652 USP35Q9P2H5 1018 aa9.45□□□□□ -0.9
NCL-203ENST00000417652 KNSTRNQ9Y448 316 aa9.45□□□□□ -0.9
NCL-203ENST00000417652 CGNL1Q0VF96 1302 aa9.45□□□□□ -0.9
NCL-203ENST00000417652 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
NCL-203ENST00000417652 C11orf95C9JLR9 678 aaPredicted RBP9.44□□□□□ -0.9
NCL-203ENST00000417652 AMPHP49418 695 aa9.44□□□□□ -0.9
NCL-203ENST00000417652 VPS72Q15906 364 aa9.44□□□□□ -0.9
NCL-203ENST00000417652 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
NCL-203ENST00000417652 MON2Q7Z3U7 1717 aa9.43□□□□□ -0.9
NCL-203ENST00000417652 BCL9LQ86UU0 1499 aa9.43□□□□□ -0.9
NCL-203ENST00000417652 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
NCL-203ENST00000417652 FYB1O15117 783 aa9.43□□□□□ -0.9
NCL-203ENST00000417652 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
NCL-203ENST00000417652 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
NCL-203ENST00000417652 COL14A1Q05707 1796 aaKnown RBP9.42□□□□□ -0.9
NCL-203ENST00000417652 SLIT2O94813 1529 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 NSD3Q9BZ95 1437 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 CPDO75976 1380 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 PPM1GO15355 546 aaPredicted RBP9.42□□□□□ -0.9
NCL-203ENST00000417652 TNNT2P45379 298 aaPredicted RBP9.42□□□□□ -0.9
NCL-203ENST00000417652 TOM1L2Q6ZVM7 507 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 ABCA3Q99758 1704 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
NCL-203ENST00000417652 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms