RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 HAP1P54257 671 aaPredicted RBP40.22■■■■■ 4.03
SH3GL1-202ENST00000417295 USP6P35125 1406 aa40.2■■■■■ 4.03
SH3GL1-202ENST00000417295 SLC24A1O60721 1099 aa40.2■■■■■ 4.03
SH3GL1-202ENST00000417295 PUS7Q96PZ0 661 aaKnown RBP40.19■■■■■ 4.02
SH3GL1-202ENST00000417295 NUTM2GQ5VZR2 741 aa40.18■■■■■ 4.02
SH3GL1-202ENST00000417295 FNBP4Q8N3X1 1017 aaPredicted RBP40.16■■■■■ 4.02
SH3GL1-202ENST00000417295 ABTB2Q8N961 1025 aa40.16■■■■■ 4.02
SH3GL1-202ENST00000417295 TMC1Q8TDI8 760 aa40.16■■■■■ 4.02
SH3GL1-202ENST00000417295 SLC12A5Q9H2X9 1139 aa40.16■■■■■ 4.02
SH3GL1-202ENST00000417295 CPSF1Q10570 1443 aaKnown RBP40.15■■■■■ 4.02
SH3GL1-202ENST00000417295 TMF1P82094 1093 aa40.15■■■■■ 4.02
SH3GL1-202ENST00000417295 ZNF692Q9BU19 519 aaPredicted RBP40.15■■■■■ 4.02
SH3GL1-202ENST00000417295 SSH2Q76I76 1423 aa40.13■■■■■ 4.01
SH3GL1-202ENST00000417295 BRD4O60885 1362 aaPredicted RBP40.13■■■■■ 4.01
SH3GL1-202ENST00000417295 USP21Q9UK80 565 aa40.11■■■■■ 4.01
SH3GL1-202ENST00000417295 ABCA3Q99758 1704 aa40.1■■■■■ 4.01
SH3GL1-202ENST00000417295 CD163L1Q9NR16 1453 aa40.09■■■■■ 4.01
SH3GL1-202ENST00000417295 KTN1Q86UP2 1357 aaKnown RBP40.07■■■■■ 4.01
SH3GL1-202ENST00000417295 EIF4G2P78344 907 aaKnown RBP eCLIP40.07■■■■■ 47e-8■■■■□ 19.8
SH3GL1-202ENST00000417295 QTRT2Q9H974 415 aaKnown RBP40.07■■■■■ 4
SH3GL1-202ENST00000417295 TTC21BQ7Z4L5 1316 aa40.05■■■■■ 4
SH3GL1-202ENST00000417295 MARF1Q9Y4F3 1742 aaKnown RBP40.05■■■■■ 4
SH3GL1-202ENST00000417295 FAM83GA6ND36 823 aa40.05■■■■■ 4
SH3GL1-202ENST00000417295 HSPA5P11021 654 aaKnown RBP40.05■■■■■ 4
SH3GL1-202ENST00000417295 BCL9LQ86UU0 1499 aa40.04■■■■■ 4
SH3GL1-202ENST00000417295 CRYBG1Q9Y4K1 1723 aa40.02■■■■■ 4
SH3GL1-202ENST00000417295 NLRP13Q86W25 1043 aa40.02■■■■■ 4
SH3GL1-202ENST00000417295 AKAP12Q02952 1782 aa40.01■■■■■ 4
SH3GL1-202ENST00000417295 SLIT2O94813 1529 aa40.01■■■■■ 4
SH3GL1-202ENST00000417295 HDGFL2Q7Z4V5 671 aaPredicted RBP40.01■■■■■ 4
SH3GL1-202ENST00000417295 USP19O94966 1318 aa40.01■■■■■ 4
SH3GL1-202ENST00000417295 RXRBP28702 533 aa39.99■■■■□ 3.99
SH3GL1-202ENST00000417295 NLRP6P59044 892 aa39.99■■■■□ 3.99
SH3GL1-202ENST00000417295 A0A1W2PP64 1363 aa39.99■■■■□ 3.99
SH3GL1-202ENST00000417295 NINLQ9Y2I6 1382 aa39.99■■■■□ 3.99
SH3GL1-202ENST00000417295 TERF2IPQ9NYB0 399 aa39.99■■■■□ 3.99
SH3GL1-202ENST00000417295 CDCA8Q53HL2 280 aa39.98■■■■□ 3.99
SH3GL1-202ENST00000417295 TRPC5Q9UL62 973 aaPredicted RBP39.98■■■■□ 3.99
SH3GL1-202ENST00000417295 TTC21AQ8NDW8 1320 aa39.97■■■■□ 3.99
SH3GL1-202ENST00000417295 ZC3H6P61129 1189 aaKnown RBP39.96■■■■□ 3.99
SH3GL1-202ENST00000417295 UNC5CLQ8IV45 518 aa39.96■■■■□ 3.99
SH3GL1-202ENST00000417295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.95■■■■□ 3.99
SH3GL1-202ENST00000417295 ATRNO75882 1429 aa39.95■■■■□ 3.99
SH3GL1-202ENST00000417295 NRKQ7Z2Y5 1582 aa39.95■■■■□ 3.99
SH3GL1-202ENST00000417295 PHRF1Q9P1Y6 1649 aaKnown RBP39.95■■■■□ 3.99
SH3GL1-202ENST00000417295 KIAA0232Q92628 1395 aa39.94■■■■□ 3.98
SH3GL1-202ENST00000417295 GCP02774 474 aa39.93■■■■□ 3.98
SH3GL1-202ENST00000417295 PRDM11Q9NQV5 511 aa39.93■■■■□ 3.98
SH3GL1-202ENST00000417295 PIK3C2AO00443 1686 aa39.93■■■■□ 3.98
SH3GL1-202ENST00000417295 RBM6P78332 1123 aaKnown RBP39.92■■■■□ 3.98
SH3GL1-202ENST00000417295 MON2Q7Z3U7 1717 aa39.92■■■■□ 3.98
SH3GL1-202ENST00000417295 SOCS7O14512 581 aa39.91■■■■□ 3.98
SH3GL1-202ENST00000417295 CHRNA2Q15822 529 aa39.9■■■■□ 3.98
SH3GL1-202ENST00000417295 EDC4Q6P2E9 1401 aaKnown RBP39.89■■■■□ 3.98
SH3GL1-202ENST00000417295 BTG4Q9NY30 223 aa39.89■■■■□ 3.98
SH3GL1-202ENST00000417295 ZRANB1Q9UGI0 708 aa39.89■■■■□ 3.98
SH3GL1-202ENST00000417295 NME9Q86XW9 330 aa39.88■■■■□ 3.97
SH3GL1-202ENST00000417295 ANKRD36BQ8N2N9 1353 aa39.87■■■■□ 3.97
SH3GL1-202ENST00000417295 PLCH1Q4KWH8 1693 aa39.86■■■■□ 3.97
SH3GL1-202ENST00000417295 SLIT3O75094 1523 aa39.85■■■■□ 3.97
SH3GL1-202ENST00000417295 GJD4Q96KN9 370 aaPredicted RBP39.83■■■■□ 3.97
SH3GL1-202ENST00000417295 CPDO75976 1380 aa39.83■■■■□ 3.97
SH3GL1-202ENST00000417295 COL14A1Q05707 1796 aaKnown RBP39.83■■■■□ 3.97
SH3GL1-202ENST00000417295 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.81■■■■□ 3.96
SH3GL1-202ENST00000417295 VPS72Q15906 364 aa39.81■■■■□ 3.96
SH3GL1-202ENST00000417295 CDK12Q9NYV4 1490 aaPredicted RBP39.8■■■■□ 3.96
SH3GL1-202ENST00000417295 USP31Q70CQ4 1352 aa39.8■■■■□ 3.96
SH3GL1-202ENST00000417295 NWD2Q9ULI1 1742 aa39.8■■■■□ 3.96
SH3GL1-202ENST00000417295 POLR3GLQ9BT43 218 aa39.8■■■■□ 3.96
SH3GL1-202ENST00000417295 SOX12O15370 315 aa39.78■■■■□ 3.96
SH3GL1-202ENST00000417295 RGS12O14924 1447 aa39.77■■■■□ 3.96
SH3GL1-202ENST00000417295 C11orf95C9JLR9 678 aaPredicted RBP39.77■■■■□ 3.96
SH3GL1-202ENST00000417295 KCNH5Q8NCM2 988 aa39.75■■■■□ 3.95
SH3GL1-202ENST00000417295 CCDC9Q9Y3X0 531 aaKnown RBP39.74■■■■□ 3.95
SH3GL1-202ENST00000417295 ZBTB7CA1YPR0 619 aa39.74■■■■□ 3.95
SH3GL1-202ENST00000417295 MYOM1P52179 1685 aa39.73■■■■□ 3.95
SH3GL1-202ENST00000417295 NRAPQ86VF7 1730 aa39.73■■■■□ 3.95
SH3GL1-202ENST00000417295 CARD14Q9BXL6 1004 aa39.72■■■■□ 3.95
SH3GL1-202ENST00000417295 GLI3P10071 1580 aa39.71■■■■□ 3.95
SH3GL1-202ENST00000417295 STRN4Q9NRL3 753 aa39.7■■■■□ 3.95
SH3GL1-202ENST00000417295 CAMTA1Q9Y6Y1 1673 aa39.69■■■■□ 3.94
SH3GL1-202ENST00000417295 OVOS2A0A0J9YW53 1432 aa39.69■■■■□ 3.94
SH3GL1-202ENST00000417295 OVOS2Q6IE36 1432 aa39.69■■■■□ 3.94
SH3GL1-202ENST00000417295 ARHGEF25Q86VW2 580 aa39.69■■■■□ 3.94
SH3GL1-202ENST00000417295 NFAT5O94916 1531 aa39.67■■■■□ 3.94
SH3GL1-202ENST00000417295 AATKQ6ZMQ8 1374 aa39.67■■■■□ 3.94
SH3GL1-202ENST00000417295 LMO7Q8WWI1 1683 aa39.66■■■■□ 3.94
SH3GL1-202ENST00000417295 FYB1O15117 783 aa39.65■■■■□ 3.94
SH3GL1-202ENST00000417295 USP54Q70EL1 1684 aa39.65■■■■□ 3.94
SH3GL1-202ENST00000417295 EVA1CP58658 441 aa39.64■■■■□ 3.94
SH3GL1-202ENST00000417295 SPATA31A5Q5VU36 1347 aa39.63■■■■□ 3.93
SH3GL1-202ENST00000417295 SPATA31A7Q8IWB4 1347 aa39.63■■■■□ 3.93
SH3GL1-202ENST00000417295 COG3Q96JB2 828 aa39.62■■■■□ 3.93
SH3GL1-202ENST00000417295 AXIN2Q9Y2T1 843 aa39.62■■■■□ 3.93
SH3GL1-202ENST00000417295 NSD3Q9BZ95 1437 aa39.61■■■■□ 3.93
SH3GL1-202ENST00000417295 GGNBP2Q9H3C7 697 aa39.61■■■■□ 3.93
SH3GL1-202ENST00000417295 LARP1Q6PKG0 1096 aaKnown RBP39.6■■■■□ 3.93
SH3GL1-202ENST00000417295 KIF7Q2M1P5 1343 aa39.58■■■■□ 3.93
SH3GL1-202ENST00000417295 COL5A2P05997 1499 aaPredicted RBP39.58■■■■□ 3.93
SH3GL1-202ENST00000417295 ONECUT3O60422 494 aaPredicted RBP39.57■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms