RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
SMPD4P1-201ENST00000416717 NKTRP30414 1462 aaKnown RBP14.14□□□□□ -0.15
SMPD4P1-201ENST00000416717 NPHP4O75161 1426 aaPredicted RBP14.13□□□□□ -0.15
SMPD4P1-201ENST00000416717 PIK3R4Q99570 1358 aa14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 U2SURPO15042 1029 aaKnown RBP14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 U2AF1L5P0DN76 240 aaPredicted RBP14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 U2AF1Q01081 240 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 PDE3BQ13370 1112 aa14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 NEUROD2Q15784 382 aa14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
SMPD4P1-201ENST00000416717 RRP7AQ9Y3A4 280 aaKnown RBP14.11□□□□□ -0.15
SMPD4P1-201ENST00000416717 PLEKHG3A1L390 1219 aa14.1□□□□□ -0.15
SMPD4P1-201ENST00000416717 NALCNQ8IZF0 1738 aa14.1□□□□□ -0.15
SMPD4P1-201ENST00000416717 NGDNQ8NEJ9 315 aaKnown RBP14.1□□□□□ -0.15
SMPD4P1-201ENST00000416717 COG3Q96JB2 828 aa14.1□□□□□ -0.15
SMPD4P1-201ENST00000416717 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
SMPD4P1-201ENST00000416717 C14orf37Q86TY3 774 aa14.09□□□□□ -0.15
SMPD4P1-201ENST00000416717 EMILIN1Q9Y6C2 1016 aa14.09□□□□□ -0.15
SMPD4P1-201ENST00000416717 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
SMPD4P1-201ENST00000416717 SOX12O15370 315 aa14.08□□□□□ -0.15
SMPD4P1-201ENST00000416717 HSPA2P54652 639 aa14.08□□□□□ -0.15
SMPD4P1-201ENST00000416717 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
SMPD4P1-201ENST00000416717 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
SMPD4P1-201ENST00000416717 FMN2Q9NZ56 1722 aa14.08□□□□□ -0.16
SMPD4P1-201ENST00000416717 USP6P35125 1406 aa14.08□□□□□ -0.16
SMPD4P1-201ENST00000416717 NRKQ7Z2Y5 1582 aa14.07□□□□□ -0.16
SMPD4P1-201ENST00000416717 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
SMPD4P1-201ENST00000416717 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
SMPD4P1-201ENST00000416717 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
SMPD4P1-201ENST00000416717 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
SMPD4P1-201ENST00000416717 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
SMPD4P1-201ENST00000416717 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
SMPD4P1-201ENST00000416717 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
SMPD4P1-201ENST00000416717 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
SMPD4P1-201ENST00000416717 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
SMPD4P1-201ENST00000416717 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
SMPD4P1-201ENST00000416717 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
SMPD4P1-201ENST00000416717 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
SMPD4P1-201ENST00000416717 WWC1Q8IX03 1113 aa14.03□□□□□ -0.16
SMPD4P1-201ENST00000416717 PNPLA6Q8IY17 1366 aa14.03□□□□□ -0.16
SMPD4P1-201ENST00000416717 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.16
SMPD4P1-201ENST00000416717 SLFN5Q08AF3 891 aa14.02□□□□□ -0.16
SMPD4P1-201ENST00000416717 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.17
SMPD4P1-201ENST00000416717 RNF123Q5XPI4 1314 aa14.02□□□□□ -0.17
SMPD4P1-201ENST00000416717 IQSEC2Q5JU85 1478 aa14.02□□□□□ -0.17
SMPD4P1-201ENST00000416717 HMOX1P09601 288 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 OVOS2A0A0J9YW53 1432 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 OVOS2Q6IE36 1432 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
SMPD4P1-201ENST00000416717 AATKQ6ZMQ8 1374 aa14□□□□□ -0.17
SMPD4P1-201ENST00000416717 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
SMPD4P1-201ENST00000416717 PLIN1O60240 522 aa14□□□□□ -0.17
SMPD4P1-201ENST00000416717 RRP1P56182 461 aaKnown RBP14□□□□□ -0.17
SMPD4P1-201ENST00000416717 PLEKHF1Q96S99 279 aa14□□□□□ -0.17
SMPD4P1-201ENST00000416717 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
SMPD4P1-201ENST00000416717 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
SMPD4P1-201ENST00000416717 NLRP6P59044 892 aa13.99□□□□□ -0.17
SMPD4P1-201ENST00000416717 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
SMPD4P1-201ENST00000416717 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 NWD1Q149M9 1564 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 E9PSI1 815 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 PRKAR2BP31323 418 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 IL13P35225 146 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
SMPD4P1-201ENST00000416717 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 TMPOP42166 694 aaKnown RBP13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 ABTB2Q8N961 1025 aa13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 ORAI2Q96SN7 254 aa13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
SMPD4P1-201ENST00000416717 PEAK1Q9H792 1746 aa13.96□□□□□ -0.17
SMPD4P1-201ENST00000416717 PSME1Q06323 249 aa13.96□□□□□ -0.17
SMPD4P1-201ENST00000416717 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
SMPD4P1-201ENST00000416717 ERICH6BQ5W0A0 696 aa13.95□□□□□ -0.18
SMPD4P1-201ENST00000416717 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
SMPD4P1-201ENST00000416717 FCHSD2O94868 740 aa13.95□□□□□ -0.18
SMPD4P1-201ENST00000416717 RIPK4P57078 832 aa13.95□□□□□ -0.18
SMPD4P1-201ENST00000416717 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
SMPD4P1-201ENST00000416717 FOXO3O43524 673 aa13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 EIF4A2Q14240 407 aaKnown RBP13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 NEFMP07197 916 aa13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 PNNQ9H307 717 aaKnown RBP13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 MARF1Q9Y4F3 1742 aaKnown RBP13.94□□□□□ -0.18
SMPD4P1-201ENST00000416717 LMTK3Q96Q04 1460 aa13.93□□□□□ -0.18
SMPD4P1-201ENST00000416717 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
SMPD4P1-201ENST00000416717 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
SMPD4P1-201ENST00000416717 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
SMPD4P1-201ENST00000416717 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
SMPD4P1-201ENST00000416717 EXOC6Q8TAG9 804 aa13.93□□□□□ -0.18
SMPD4P1-201ENST00000416717 AMPHP49418 695 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms