RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 SLC52A1Q9NWF4 448 aa18.78■□□□□ 0.6
LINC00475-202ENST00000416438 TRIM27P14373 513 aa18.78■□□□□ 0.6
LINC00475-202ENST00000416438 MYO5BQ9ULV0 1848 aa18.77■□□□□ 0.6
LINC00475-202ENST00000416438 RIPK4P57078 832 aa18.77■□□□□ 0.6
LINC00475-202ENST00000416438 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
LINC00475-202ENST00000416438 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
LINC00475-202ENST00000416438 NOB1Q9ULX3 412 aaKnown RBP18.75■□□□□ 0.59
LINC00475-202ENST00000416438 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
LINC00475-202ENST00000416438 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
LINC00475-202ENST00000416438 BECN1Q14457 450 aa18.74■□□□□ 0.59
LINC00475-202ENST00000416438 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
LINC00475-202ENST00000416438 TBC1D32Q96NH3 1257 aa18.74■□□□□ 0.59
LINC00475-202ENST00000416438 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
LINC00475-202ENST00000416438 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
LINC00475-202ENST00000416438 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
LINC00475-202ENST00000416438 ADGRB2O60241 1585 aa18.73■□□□□ 0.59
LINC00475-202ENST00000416438 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
LINC00475-202ENST00000416438 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
LINC00475-202ENST00000416438 ATF7IPQ6VMQ6 1270 aa18.72■□□□□ 0.59
LINC00475-202ENST00000416438 ZFYVE9O95405 1425 aa18.72■□□□□ 0.59
LINC00475-202ENST00000416438 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
LINC00475-202ENST00000416438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC00475-202ENST00000416438 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
LINC00475-202ENST00000416438 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
LINC00475-202ENST00000416438 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
LINC00475-202ENST00000416438 COL3A1P02461 1466 aaPredicted RBP18.71■□□□□ 0.59
LINC00475-202ENST00000416438 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
LINC00475-202ENST00000416438 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
LINC00475-202ENST00000416438 TBC1D2Q9BYX2 928 aa18.71■□□□□ 0.59
LINC00475-202ENST00000416438 PTPRMP28827 1452 aa18.71■□□□□ 0.59
LINC00475-202ENST00000416438 ATAD2Q6PL18 1390 aa18.71■□□□□ 0.59
LINC00475-202ENST00000416438 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
LINC00475-202ENST00000416438 HDGFL2Q7Z4V5 671 aaPredicted RBP18.7■□□□□ 0.58
LINC00475-202ENST00000416438 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
LINC00475-202ENST00000416438 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
LINC00475-202ENST00000416438 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
LINC00475-202ENST00000416438 MFAP1P55081 439 aaKnown RBP18.68■□□□□ 0.58
LINC00475-202ENST00000416438 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
LINC00475-202ENST00000416438 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
LINC00475-202ENST00000416438 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
LINC00475-202ENST00000416438 THUMPD2Q9BTF0 503 aaKnown RBP18.66■□□□□ 0.58
LINC00475-202ENST00000416438 HMOX1P09601 288 aa18.66■□□□□ 0.58
LINC00475-202ENST00000416438 TSPOAP1O95153 1857 aa18.65■□□□□ 0.58
LINC00475-202ENST00000416438 IL16Q14005 1332 aa18.65■□□□□ 0.58
LINC00475-202ENST00000416438 ZBTB40Q9NUA8 1239 aa18.65■□□□□ 0.58
LINC00475-202ENST00000416438 MLECQ14165 292 aa18.64■□□□□ 0.57
LINC00475-202ENST00000416438 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
LINC00475-202ENST00000416438 POLKQ9UBT6 870 aa18.64■□□□□ 0.57
LINC00475-202ENST00000416438 C22orf23Q9BZE7 217 aa18.64■□□□□ 0.57
LINC00475-202ENST00000416438 ZMYM3Q14202 1370 aa18.64■□□□□ 0.57
LINC00475-202ENST00000416438 PNPLA6Q8IY17 1366 aa18.64■□□□□ 0.57
LINC00475-202ENST00000416438 SMC5Q8IY18 1101 aa18.63■□□□□ 0.57
LINC00475-202ENST00000416438 FCHSD2O94868 740 aa18.62■□□□□ 0.57
LINC00475-202ENST00000416438 RSPH6AQ9H0K4 717 aa18.62■□□□□ 0.57
LINC00475-202ENST00000416438 ALKQ9UM73 1620 aa18.62■□□□□ 0.57
LINC00475-202ENST00000416438 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
LINC00475-202ENST00000416438 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
LINC00475-202ENST00000416438 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
LINC00475-202ENST00000416438 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
LINC00475-202ENST00000416438 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
LINC00475-202ENST00000416438 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
LINC00475-202ENST00000416438 DIP2BQ9P265 1576 aa18.61■□□□□ 0.57
LINC00475-202ENST00000416438 ARHGEF40Q8TER5 1519 aa18.6■□□□□ 0.57
LINC00475-202ENST00000416438 KIF16BQ96L93 1317 aa18.6■□□□□ 0.57
LINC00475-202ENST00000416438 MED14O60244 1454 aa18.6■□□□□ 0.57
LINC00475-202ENST00000416438 TSPYL6Q8N831 410 aa18.6■□□□□ 0.57
LINC00475-202ENST00000416438 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
LINC00475-202ENST00000416438 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
LINC00475-202ENST00000416438 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.57
LINC00475-202ENST00000416438 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.57
LINC00475-202ENST00000416438 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.57
LINC00475-202ENST00000416438 CLTCQ00610 1675 aaKnown RBP18.57■□□□□ 0.56
LINC00475-202ENST00000416438 ALDH1L2Q3SY69 923 aa18.57■□□□□ 0.56
LINC00475-202ENST00000416438 NME9Q86XW9 330 aa18.57■□□□□ 0.56
LINC00475-202ENST00000416438 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
LINC00475-202ENST00000416438 LRRC7Q96NW7 1537 aa18.56■□□□□ 0.56
LINC00475-202ENST00000416438 VAMP4O75379 141 aa18.56■□□□□ 0.56
LINC00475-202ENST00000416438 NUCB1Q02818 461 aa18.56■□□□□ 0.56
LINC00475-202ENST00000416438 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
LINC00475-202ENST00000416438 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
LINC00475-202ENST00000416438 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
LINC00475-202ENST00000416438 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
LINC00475-202ENST00000416438 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
LINC00475-202ENST00000416438 ARXQ96QS3 562 aa18.54■□□□□ 0.56
LINC00475-202ENST00000416438 RIMS2Q9UQ26 1411 aa18.54■□□□□ 0.56
LINC00475-202ENST00000416438 MRPL50Q8N5N7 158 aaKnown RBP18.54■□□□□ 0.56
LINC00475-202ENST00000416438 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
LINC00475-202ENST00000416438 ANKRD45Q5TZF3 282 aa18.53■□□□□ 0.56
LINC00475-202ENST00000416438 ANKRD26Q9UPS8 1709 aa18.53■□□□□ 0.56
LINC00475-202ENST00000416438 IL13P35225 146 aa18.53■□□□□ 0.56
LINC00475-202ENST00000416438 MBIPQ9NS73 344 aa18.53■□□□□ 0.56
LINC00475-202ENST00000416438 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
LINC00475-202ENST00000416438 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.55
LINC00475-202ENST00000416438 AGLP35573 1532 aa18.51■□□□□ 0.55
LINC00475-202ENST00000416438 DCTN1Q14203 1278 aa18.51■□□□□ 0.55
LINC00475-202ENST00000416438 GZF1Q9H116 711 aaPredicted RBP18.5■□□□□ 0.55
LINC00475-202ENST00000416438 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
LINC00475-202ENST00000416438 MCM4P33991 863 aa18.5■□□□□ 0.55
LINC00475-202ENST00000416438 C8orf58Q8NAV2 365 aa18.5■□□□□ 0.55
LINC00475-202ENST00000416438 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms