RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
XIST-201ENST00000416330 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
XIST-201ENST00000416330 IRF7Q92985 503 aa9.32□□□□□ -0.92
XIST-201ENST00000416330 TRAIPQ9BWF2 469 aa9.32□□□□□ -0.92
XIST-201ENST00000416330 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
XIST-201ENST00000416330 CAPN5O15484 640 aaPredicted RBP9.3□□□□□ -0.92
XIST-201ENST00000416330 HOXA2O43364 376 aa9.3□□□□□ -0.92
XIST-201ENST00000416330 SKOR1P84550 965 aa9.3□□□□□ -0.92
XIST-201ENST00000416330 TMCO4Q5TGY1 634 aa9.3□□□□□ -0.92
XIST-201ENST00000416330 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
XIST-201ENST00000416330 JUNDP17535 347 aa9.29□□□□□ -0.92
XIST-201ENST00000416330 NPAS3Q8IXF0 933 aa9.29□□□□□ -0.92
XIST-201ENST00000416330 ZSCAN1Q8NBB4 408 aa9.29□□□□□ -0.92
XIST-201ENST00000416330 GPBP1L1Q9HC44 474 aaPredicted RBP9.29□□□□□ -0.92
XIST-201ENST00000416330 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
XIST-201ENST00000416330 MFAP1P55081 439 aaKnown RBP9.27□□□□□ -0.93
XIST-201ENST00000416330 NUTM1Q86Y26 1132 aa9.27□□□□□ -0.93
XIST-201ENST00000416330 KRI1Q8N9T8 703 aaKnown RBP9.27□□□□□ -0.93
XIST-201ENST00000416330 NUDT12Q9BQG2 462 aa9.27□□□□□ -0.93
XIST-201ENST00000416330 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
XIST-201ENST00000416330 CLCN1P35523 988 aa9.26□□□□□ -0.93
XIST-201ENST00000416330 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
XIST-201ENST00000416330 GMPRP36959 345 aa9.25□□□□□ -0.93
XIST-201ENST00000416330 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
XIST-201ENST00000416330 ZMYND10O75800 440 aa9.24□□□□□ -0.93
XIST-201ENST00000416330 BMP1P13497 986 aa9.24□□□□□ -0.93
XIST-201ENST00000416330 RETREG3Q86VR2 466 aa9.23□□□□□ -0.93
XIST-201ENST00000416330 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
XIST-201ENST00000416330 C6orf229H3BNL8 230 aa9.21□□□□□ -0.94
XIST-201ENST00000416330 SIAH2O43255 324 aa9.21□□□□□ -0.94
XIST-201ENST00000416330 VEGFBP49765 207 aa9.21□□□□□ -0.94
XIST-201ENST00000416330 TRIM46Q7Z4K8 759 aa9.21□□□□□ -0.94
XIST-201ENST00000416330 DHX37Q8IY37 1157 aaKnown RBP9.21□□□□□ -0.94
XIST-201ENST00000416330 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.94
XIST-201ENST00000416330 E9PSI1 815 aa9.2□□□□□ -0.94
XIST-201ENST00000416330 H3BM21 787 aa9.2□□□□□ -0.94
XIST-201ENST00000416330 MS4A1P11836 297 aa9.2□□□□□ -0.94
XIST-201ENST00000416330 SCARF1Q14162 830 aa9.2□□□□□ -0.94
XIST-201ENST00000416330 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
XIST-201ENST00000416330 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
XIST-201ENST00000416330 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
XIST-201ENST00000416330 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
XIST-201ENST00000416330 SH3BP2P78314 561 aa9.18□□□□□ -0.94
XIST-201ENST00000416330 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
XIST-201ENST00000416330 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
XIST-201ENST00000416330 FDX1P10109 184 aa9.17□□□□□ -0.94
XIST-201ENST00000416330 PCDHGC3Q9UN70 934 aa9.17□□□□□ -0.94
XIST-201ENST00000416330 TRAK2O60296 914 aa9.15□□□□□ -0.94
XIST-201ENST00000416330 VARSP26640 1264 aaKnown RBP9.15□□□□□ -0.94
XIST-201ENST00000416330 FLIIQ13045 1269 aa9.15□□□□□ -0.94
XIST-201ENST00000416330 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
XIST-201ENST00000416330 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
XIST-201ENST00000416330 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
XIST-201ENST00000416330 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
XIST-201ENST00000416330 UNC93B1Q9H1C4 597 aa9.14□□□□□ -0.95
XIST-201ENST00000416330 NNTQ13423 1086 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 PTPRNQ16849 979 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 MRPL14Q6P1L8 145 aaKnown RBP9.13□□□□□ -0.95
XIST-201ENST00000416330 UBE2Q2Q8WVN8 375 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 BAP1Q92560 729 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 POLR3GLQ9BT43 218 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
XIST-201ENST00000416330 ERBB4Q15303 1308 aa9.12□□□□□ -0.95
XIST-201ENST00000416330 NDUFV2P19404 249 aa9.12□□□□□ -0.95
XIST-201ENST00000416330 CLUAP1Q96AJ1 413 aa9.12□□□□□ -0.95
XIST-201ENST00000416330 AK7Q96M32 723 aa9.12□□□□□ -0.95
XIST-201ENST00000416330 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
XIST-201ENST00000416330 A6NJR5 290 aa9.11□□□□□ -0.95
XIST-201ENST00000416330 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
XIST-201ENST00000416330 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
XIST-201ENST00000416330 FAM177A1Q8N128 213 aaPredicted RBP9.11□□□□□ -0.95
XIST-201ENST00000416330 PURBQ96QR8 312 aaKnown RBP9.11□□□□□ -0.95
XIST-201ENST00000416330 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
XIST-201ENST00000416330 ADH1CP00326 375 aa9.1□□□□□ -0.95
XIST-201ENST00000416330 AMHR2Q16671 573 aa9.1□□□□□ -0.95
XIST-201ENST00000416330 GIGYF2Q6Y7W6 1299 aaKnown RBP9.1□□□□□ -0.95
XIST-201ENST00000416330 MPNDQ8N594 471 aa9.1□□□□□ -0.95
XIST-201ENST00000416330 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
XIST-201ENST00000416330 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
XIST-201ENST00000416330 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
XIST-201ENST00000416330 MAN1A2O60476 641 aa9.08□□□□□ -0.96
XIST-201ENST00000416330 UPP2O95045 317 aa9.08□□□□□ -0.96
XIST-201ENST00000416330 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
XIST-201ENST00000416330 CTHP32929 405 aa9.08□□□□□ -0.96
XIST-201ENST00000416330 PRR7Q8TB68 274 aa9.08□□□□□ -0.96
XIST-201ENST00000416330 ARID5BQ14865 1188 aa9.07□□□□□ -0.96
XIST-201ENST00000416330 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
XIST-201ENST00000416330 IRF5Q13568 498 aa9.06□□□□□ -0.96
XIST-201ENST00000416330 MTMR2Q13614 643 aa9.06□□□□□ -0.96
XIST-201ENST00000416330 BEGAINQ9BUH8 593 aa9.06□□□□□ -0.96
XIST-201ENST00000416330 TIMP2P16035 220 aa9.05□□□□□ -0.96
XIST-201ENST00000416330 DESI1Q6ICB0 168 aa9.05□□□□□ -0.96
XIST-201ENST00000416330 AGERQ15109 404 aa9.04□□□□□ -0.96
XIST-201ENST00000416330 PARP9Q8IXQ6 854 aa9.04□□□□□ -0.96
XIST-201ENST00000416330 FAM9AQ8IZU1 332 aaPredicted RBP9.04□□□□□ -0.96
XIST-201ENST00000416330 SOBPA7XYQ1 873 aa9.03□□□□□ -0.96
XIST-201ENST00000416330 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
XIST-201ENST00000416330 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
XIST-201ENST00000416330 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms