RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GTF2E1P29083 439 aaPredicted RBP15.57■□□□□ 0.08
SCN1B-202ENST00000415950 TRIM27P14373 513 aa15.57■□□□□ 0.08
SCN1B-202ENST00000415950 WDR63Q8IWG1 891 aa15.57■□□□□ 0.08
SCN1B-202ENST00000415950 DDX54Q8TDD1 881 aaKnown RBP15.57■□□□□ 0.08
SCN1B-202ENST00000415950 TBC1D32Q96NH3 1257 aa15.57■□□□□ 0.08
SCN1B-202ENST00000415950 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
SCN1B-202ENST00000415950 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
SCN1B-202ENST00000415950 RABEP1Q15276 862 aa15.57■□□□□ 0.08
SCN1B-202ENST00000415950 RRAGDQ9NQL2 400 aaPredicted RBP15.57■□□□□ 0.08
SCN1B-202ENST00000415950 CPLX1O14810 134 aa15.56■□□□□ 0.08
SCN1B-202ENST00000415950 AAMPQ13685 434 aa15.56■□□□□ 0.08
SCN1B-202ENST00000415950 IFIT2P09913 472 aaKnown RBP15.56■□□□□ 0.08
SCN1B-202ENST00000415950 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
SCN1B-202ENST00000415950 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
SCN1B-202ENST00000415950 TPM2P07951 284 aa15.56■□□□□ 0.08
SCN1B-202ENST00000415950 RRP9O43818 475 aaKnown RBP15.56■□□□□ 0.08
SCN1B-202ENST00000415950 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
SCN1B-202ENST00000415950 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
SCN1B-202ENST00000415950 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
SCN1B-202ENST00000415950 LRPPRCP42704 1394 aaKnown RBP15.56■□□□□ 0.08
SCN1B-202ENST00000415950 APPP05067 770 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 CEBPZQ03701 1054 aaKnown RBP15.55■□□□□ 0.08
SCN1B-202ENST00000415950 ZSCAN30Q86W11 494 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 RUFY2Q8WXA3 655 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 CEP89Q96ST8 783 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 CCDC39Q9UFE4 941 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 IL1RAPL2Q9NP60 686 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 KDM4AO75164 1064 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 SASS6Q6UVJ0 657 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 PRAM1Q96QH2 718 aa15.55■□□□□ 0.08
SCN1B-202ENST00000415950 AKAP17AQ02040 695 aaKnown RBP15.54■□□□□ 0.08
SCN1B-202ENST00000415950 RBM27Q9P2N5 1060 aaKnown RBP15.54■□□□□ 0.08
SCN1B-202ENST00000415950 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
SCN1B-202ENST00000415950 TPM1P09493 284 aa15.54■□□□□ 0.08
SCN1B-202ENST00000415950 GPS2Q13227 327 aa15.54■□□□□ 0.08
SCN1B-202ENST00000415950 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
SCN1B-202ENST00000415950 EHBP1L1Q8N3D4 1523 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 CPLX2Q6PUV4 134 aaKnown RBP15.53■□□□□ 0.08
SCN1B-202ENST00000415950 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 TSPY26PQ9H489 355 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 PLEKHH1Q9ULM0 1364 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 RRS1Q15050 365 aaKnown RBP15.53■□□□□ 0.08
SCN1B-202ENST00000415950 PTPN23Q9H3S7 1636 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
SCN1B-202ENST00000415950 UBE2Q2Q8WVN8 375 aa15.52■□□□□ 0.08
SCN1B-202ENST00000415950 TRIM5Q9C035 493 aa15.52■□□□□ 0.08
SCN1B-202ENST00000415950 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.08
SCN1B-202ENST00000415950 TSHZ3Q63HK5 1081 aa15.52■□□□□ 0.07
SCN1B-202ENST00000415950 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
SCN1B-202ENST00000415950 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
SCN1B-202ENST00000415950 MNS1Q8NEH6 495 aa15.51■□□□□ 0.07
SCN1B-202ENST00000415950 DHX29Q7Z478 1369 aaKnown RBP15.51■□□□□ 0.07
SCN1B-202ENST00000415950 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
SCN1B-202ENST00000415950 IPO7O95373 1038 aaKnown RBP15.51■□□□□ 0.07
SCN1B-202ENST00000415950 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
SCN1B-202ENST00000415950 NKTRP30414 1462 aaKnown RBP15.5■□□□□ 0.07
SCN1B-202ENST00000415950 MBD3O95983 291 aa15.5■□□□□ 0.07
SCN1B-202ENST00000415950 NEXNQ0ZGT2 675 aa15.5■□□□□ 0.07
SCN1B-202ENST00000415950 SDF4Q9BRK5 362 aa15.5■□□□□ 0.07
SCN1B-202ENST00000415950 SYNE3Q6ZMZ3 975 aa15.5■□□□□ 0.07
SCN1B-202ENST00000415950 CCDC73Q6ZRK6 1079 aa15.5■□□□□ 0.07
SCN1B-202ENST00000415950 FERMT3Q86UX7 667 aa15.5■□□□□ 0.07
SCN1B-202ENST00000415950 NSD3Q9BZ95 1437 aa15.49■□□□□ 0.07
SCN1B-202ENST00000415950 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
SCN1B-202ENST00000415950 WDR62O43379 1518 aa15.49■□□□□ 0.07
SCN1B-202ENST00000415950 STK3Q13188 491 aa15.49■□□□□ 0.07
SCN1B-202ENST00000415950 TEX35Q5T0J7 233 aa15.49■□□□□ 0.07
SCN1B-202ENST00000415950 PRM3Q9NNZ6 103 aa15.49■□□□□ 0.07
SCN1B-202ENST00000415950 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 ERC2O15083 957 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
SCN1B-202ENST00000415950 UBTFL1P0CB47 393 aaPredicted RBP15.48■□□□□ 0.07
SCN1B-202ENST00000415950 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCN1B-202ENST00000415950 TRIM29Q14134 588 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 RAD21O60216 631 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 TBC1D9Q6ZT07 1266 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 CBX1P83916 185 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 SETQ01105 290 aaPredicted RBP15.48■□□□□ 0.07
SCN1B-202ENST00000415950 C1orf141Q5JVX7 400 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 TTLL5Q6EMB2 1281 aa15.48■□□□□ 0.07
SCN1B-202ENST00000415950 RNF20Q5VTR2 975 aa15.47■□□□□ 0.07
SCN1B-202ENST00000415950 ZHX1Q9UKY1 873 aaPredicted RBP15.47■□□□□ 0.07
SCN1B-202ENST00000415950 CIZ1Q9ULV3 898 aaPredicted RBP15.47■□□□□ 0.07
SCN1B-202ENST00000415950 ZNF830Q96NB3 372 aaPredicted RBP15.47■□□□□ 0.07
SCN1B-202ENST00000415950 ROCK1Q13464 1354 aa15.47■□□□□ 0.07
SCN1B-202ENST00000415950 F6X3S4 739 aa15.47■□□□□ 0.07
SCN1B-202ENST00000415950 EID1Q9Y6B2 187 aa15.47■□□□□ 0.07
SCN1B-202ENST00000415950 BAG4O95429 457 aaKnown RBP15.46■□□□□ 0.07
SCN1B-202ENST00000415950 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
SCN1B-202ENST00000415950 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
SCN1B-202ENST00000415950 PDILTQ8N807 584 aa15.46■□□□□ 0.06
SCN1B-202ENST00000415950 NEUROD6Q96NK8 337 aa15.46■□□□□ 0.06
SCN1B-202ENST00000415950 USP25Q9UHP3 1055 aa15.46■□□□□ 0.06
SCN1B-202ENST00000415950 SKIDA1Q1XH10 827 aa15.45■□□□□ 0.06
SCN1B-202ENST00000415950 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
SCN1B-202ENST00000415950 MCM10Q7L590 875 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms